RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 TRMT112Q9UI30 125 aaKnown RBP17.18■□□□□ 0.34
PRPF19-204ENST00000539960 CT47B1P0C2W7 299 aaPredicted RBP17.17■□□□□ 0.34
PRPF19-204ENST00000539960 FKBP5Q13451 457 aaPredicted RBP17.17■□□□□ 0.34
PRPF19-204ENST00000539960 TTLL6Q8N841 843 aa17.17■□□□□ 0.34
PRPF19-204ENST00000539960 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRPF19-204ENST00000539960 MYD88Q99836 296 aa17.17■□□□□ 0.34
PRPF19-204ENST00000539960 RNF123Q5XPI4 1314 aa17.17■□□□□ 0.34
PRPF19-204ENST00000539960 SYNE4Q8N205 404 aa17.16■□□□□ 0.34
PRPF19-204ENST00000539960 ADCY9O60503 1353 aa17.15■□□□□ 0.34
PRPF19-204ENST00000539960 NEXNQ0ZGT2 675 aa17.15■□□□□ 0.34
PRPF19-204ENST00000539960 STYK1Q6J9G0 422 aa17.15■□□□□ 0.34
PRPF19-204ENST00000539960 MRPL50Q8N5N7 158 aaKnown RBP17.15■□□□□ 0.34
PRPF19-204ENST00000539960 CCDC191Q8NCU4 936 aa17.15■□□□□ 0.34
PRPF19-204ENST00000539960 SSH1Q8WYL5 1049 aa17.15■□□□□ 0.34
PRPF19-204ENST00000539960 MASTLQ96GX5 879 aa17.15■□□□□ 0.34
PRPF19-204ENST00000539960 ZBED9Q6R2W3 1325 aa17.15■□□□□ 0.34
PRPF19-204ENST00000539960 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
PRPF19-204ENST00000539960 KIAA1551Q9HCM1 1747 aa17.14■□□□□ 0.33
PRPF19-204ENST00000539960 IGKV5-2P06315 115 aa17.14■□□□□ 0.33
PRPF19-204ENST00000539960 NPR1P16066 1061 aa17.14■□□□□ 0.33
PRPF19-204ENST00000539960 ALDH1L2Q3SY69 923 aa17.14■□□□□ 0.33
PRPF19-204ENST00000539960 DNAAF4Q8WXU2 420 aa17.14■□□□□ 0.33
PRPF19-204ENST00000539960 CNKSR1Q969H4 720 aa17.14■□□□□ 0.33
PRPF19-204ENST00000539960 FAM89AQ96GI7 184 aa17.14■□□□□ 0.33
PRPF19-204ENST00000539960 NLRP3Q96P20 1036 aa17.14■□□□□ 0.33
PRPF19-204ENST00000539960 N4BP2Q86UW6 1770 aaPredicted RBP17.14■□□□□ 0.33
PRPF19-204ENST00000539960 ABCC12Q96J65 1359 aa17.14■□□□□ 0.33
PRPF19-204ENST00000539960 CRY2Q49AN0 593 aa17.13■□□□□ 0.33
PRPF19-204ENST00000539960 CWC25Q9NXE8 425 aaPredicted RBP17.13■□□□□ 0.33
PRPF19-204ENST00000539960 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
PRPF19-204ENST00000539960 ZBTB38Q8NAP3 1195 aaPredicted RBP17.12■□□□□ 0.33
PRPF19-204ENST00000539960 F6X3S4 739 aa17.11■□□□□ 0.33
PRPF19-204ENST00000539960 ALDH1B1P30837 517 aa17.11■□□□□ 0.33
PRPF19-204ENST00000539960 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
PRPF19-204ENST00000539960 ARHGAP27Q6ZUM4 889 aa17.11■□□□□ 0.33
PRPF19-204ENST00000539960 C3orf67Q6ZVT6 689 aa17.11■□□□□ 0.33
PRPF19-204ENST00000539960 ANKRD31Q8N7Z5 1873 aa17.11■□□□□ 0.33
PRPF19-204ENST00000539960 RIC1Q4ADV7 1423 aa17.11■□□□□ 0.33
PRPF19-204ENST00000539960 NEURL1BA8MQ27 555 aa17.1■□□□□ 0.33
PRPF19-204ENST00000539960 PCCAP05165 728 aaPredicted RBP17.1■□□□□ 0.33
PRPF19-204ENST00000539960 CWF19L2Q2TBE0 894 aaKnown RBP17.1■□□□□ 0.33
PRPF19-204ENST00000539960 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
PRPF19-204ENST00000539960 LINS1Q8NG48 757 aa17.1■□□□□ 0.33
PRPF19-204ENST00000539960 RPGRQ92834 1020 aaKnown RBP17.1■□□□□ 0.33
PRPF19-204ENST00000539960 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
PRPF19-204ENST00000539960 SMC4Q9NTJ3 1288 aa17.1■□□□□ 0.33
PRPF19-204ENST00000539960 IRS4O14654 1257 aaPredicted RBP17.09■□□□□ 0.33
PRPF19-204ENST00000539960 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
PRPF19-204ENST00000539960 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
PRPF19-204ENST00000539960 PRPF40BQ6NWY9 871 aaKnown RBP17.09■□□□□ 0.33
PRPF19-204ENST00000539960 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
PRPF19-204ENST00000539960 CACNA1FO60840 1977 aa17.09■□□□□ 0.33
PRPF19-204ENST00000539960 GOLGB1Q14789 3259 aaKnown RBP17.09■□□□□ 0.33
PRPF19-204ENST00000539960 ARFGEF2Q9Y6D5 1785 aa17.08■□□□□ 0.33
PRPF19-204ENST00000539960 PTPRCP08575 1304 aa17.08■□□□□ 0.32
PRPF19-204ENST00000539960 H7C1W4 665 aa17.08■□□□□ 0.32
PRPF19-204ENST00000539960 C21orf2O43822 256 aa17.08■□□□□ 0.32
PRPF19-204ENST00000539960 HSP90B1P14625 803 aaKnown RBP17.08■□□□□ 0.32
PRPF19-204ENST00000539960 GCKRQ14397 625 aa17.08■□□□□ 0.32
PRPF19-204ENST00000539960 BEND3Q5T5X7 828 aa17.08■□□□□ 0.32
PRPF19-204ENST00000539960 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
PRPF19-204ENST00000539960 CRAMP1Q96RY5 1269 aa17.08■□□□□ 0.32
PRPF19-204ENST00000539960 ANKRD36CQ5JPF3 1778 aa17.07■□□□□ 0.32
PRPF19-204ENST00000539960 SF3B3Q15393 1217 aaKnown RBP17.07■□□□□ 0.32
PRPF19-204ENST00000539960 C7orf43Q8WVR3 580 aa17.07■□□□□ 0.32
PRPF19-204ENST00000539960 SLC4A10Q6U841 1118 aa17.06■□□□□ 0.32
PRPF19-204ENST00000539960 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
PRPF19-204ENST00000539960 BRCA1P38398 1863 aaKnown RBP17.05■□□□□ 0.32
PRPF19-204ENST00000539960 CDHR2Q9BYE9 1310 aa17.05■□□□□ 0.32
PRPF19-204ENST00000539960 YY1P25490 414 aa17.05■□□□□ 0.32
PRPF19-204ENST00000539960 NOB1Q9ULX3 412 aaKnown RBP17.05■□□□□ 0.32
PRPF19-204ENST00000539960 PDE8AO60658 829 aa17.04■□□□□ 0.32
PRPF19-204ENST00000539960 ALDH1L1O75891 902 aa17.04■□□□□ 0.32
PRPF19-204ENST00000539960 SOGA3Q5TF21 947 aa17.04■□□□□ 0.32
PRPF19-204ENST00000539960 DDX46Q7L014 1031 aaKnown RBP17.04■□□□□ 0.32
PRPF19-204ENST00000539960 UBE3BQ7Z3V4 1068 aa17.04■□□□□ 0.32
PRPF19-204ENST00000539960 SRCIN1Q9C0H9 1055 aa17.04■□□□□ 0.32
PRPF19-204ENST00000539960 BBOX1O75936 387 aa17.03■□□□□ 0.32
PRPF19-204ENST00000539960 DLEC1Q9Y238 1755 aa17.02■□□□□ 0.32
PRPF19-204ENST00000539960 COL11A2P13942 1736 aaPredicted RBP17.02■□□□□ 0.32
PRPF19-204ENST00000539960 TNRC6CQ9HCJ0 1690 aaKnown RBP17.02■□□□□ 0.32
PRPF19-204ENST00000539960 BCAR3O75815 825 aa17.02■□□□□ 0.32
PRPF19-204ENST00000539960 CASP7P55210 303 aa17.02■□□□□ 0.32
PRPF19-204ENST00000539960 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
PRPF19-204ENST00000539960 ABCC4O15439 1325 aa17.01■□□□□ 0.31
PRPF19-204ENST00000539960 SLX4Q8IY92 1834 aa17.01■□□□□ 0.31
PRPF19-204ENST00000539960 NFKBIEO00221 500 aa17.01■□□□□ 0.31
PRPF19-204ENST00000539960 CCDC93Q567U6 631 aa17.01■□□□□ 0.31
PRPF19-204ENST00000539960 CC2D2BQ6DHV5 1058 aa17.01■□□□□ 0.31
PRPF19-204ENST00000539960 OLFM4Q6UX06 510 aa17.01■□□□□ 0.31
PRPF19-204ENST00000539960 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
PRPF19-204ENST00000539960 PLA2G12BQ9BX93 195 aa17.01■□□□□ 0.31
PRPF19-204ENST00000539960 API5Q9BZZ5 524 aaKnown RBP17.01■□□□□ 0.31
PRPF19-204ENST00000539960 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
PRPF19-204ENST00000539960 UTRNP46939 3433 aa17.01■□□□□ 0.31
PRPF19-204ENST00000539960 GRM8O00222 908 aa17■□□□□ 0.31
PRPF19-204ENST00000539960 PPEF1O14829 653 aaPredicted RBP17■□□□□ 0.31
PRPF19-204ENST00000539960 IPO8O15397 1037 aaKnown RBP17■□□□□ 0.31
PRPF19-204ENST00000539960 GRAPQ13588 217 aa17■□□□□ 0.31
PRPF19-204ENST00000539960 CCDC152Q4G0S7 254 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms