RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 KRT23Q9C075 422 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 MSH6P52701 1360 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 MCM5P33992 734 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 CCT2P78371 535 aaKnown RBP7.48□□□□□ -1.21
LSAMP-207ENST00000539563 IFI16Q16666 785 aaKnown RBP7.48□□□□□ -1.21
LSAMP-207ENST00000539563 ACEP12821 1306 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 TSPY2A6NKD2 308 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 TAF3Q5VWG9 929 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 FERMT3Q86UX7 667 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 ANKRD24Q8TF21 1146 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 USP16Q9Y5T5 823 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 BMP15O95972 392 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 HDAC1Q13547 482 aaPredicted RBP7.47□□□□□ -1.21
LSAMP-207ENST00000539563 TTC22Q5TAA0 569 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 DYDC1Q8WWB3 177 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 CNNM2Q9H8M5 875 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 CABP5Q9NP86 173 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 RMND1Q9NWS8 449 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 ADAMTS2O95450 1211 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 RFC4P35249 363 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 MTIF2P46199 727 aaKnown RBP7.47□□□□□ -1.21
LSAMP-207ENST00000539563 FERMT2Q96AC1 680 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 NGLY1Q96IV0 654 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 A2MP01023 1474 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 RRP9O43818 475 aaKnown RBP7.47□□□□□ -1.21
LSAMP-207ENST00000539563 UBA5Q9GZZ9 404 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 NUCB1Q02818 461 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 CGNQ9P2M7 1197 aaKnown RBP7.47□□□□□ -1.21
LSAMP-207ENST00000539563 SHTN1A0MZ66 631 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 GPTP24298 496 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 SCLT1Q96NL6 688 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 C11orf95C9JLR9 678 aaPredicted RBP7.47□□□□□ -1.21
LSAMP-207ENST00000539563 C6orf229H3BNL8 230 aa7.47□□□□□ -1.21
LSAMP-207ENST00000539563 URI1O94763 535 aaPredicted RBP7.47□□□□□ -1.21
LSAMP-207ENST00000539563 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
LSAMP-207ENST00000539563 ALS2CR12Q96Q35 445 aa7.46□□□□□ -1.21
LSAMP-207ENST00000539563 ZNF518AQ6AHZ1 1483 aa7.46□□□□□ -1.21
LSAMP-207ENST00000539563 NBPF7P0C2Y1 421 aaPredicted RBP7.46□□□□□ -1.21
LSAMP-207ENST00000539563 CCDC172P0C7W6 258 aa7.46□□□□□ -1.21
LSAMP-207ENST00000539563 C20orf194Q5TEA3 1177 aa7.46□□□□□ -1.21
LSAMP-207ENST00000539563 MPNDQ8N594 471 aa7.46□□□□□ -1.21
LSAMP-207ENST00000539563 MYO1BO43795 1136 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 UBA7P41226 1012 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 ANKRD13DQ6ZTN6 518 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 LUZP1Q86V48 1076 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.46□□□□□ -1.22
LSAMP-207ENST00000539563 MBIPQ9NS73 344 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 PI4KAP2A4QPH2 592 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 GNAQP50148 359 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 FBXO31Q5XUX0 539 aaPredicted RBP7.46□□□□□ -1.22
LSAMP-207ENST00000539563 PI4KAP1Q8N8J0 262 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 TBC1D2Q9BYX2 928 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 DISP3Q9P2K9 1392 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 PPIP5K1Q6PFW1 1433 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 UHRF1BP1LA0JNW5 1464 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 HOOK3Q86VS8 718 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 TNPO1Q92973 898 aaKnown RBP7.46□□□□□ -1.22
LSAMP-207ENST00000539563 ABCC1P33527 1531 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 SYCP2Q9BX26 1530 aa7.46□□□□□ -1.22
LSAMP-207ENST00000539563 ORC3Q9UBD5 711 aaPredicted RBP7.45□□□□□ -1.22
LSAMP-207ENST00000539563 IFFO1Q0D2I5 559 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 TDRD12Q587J7 1177 aaKnown RBP7.45□□□□□ -1.22
LSAMP-207ENST00000539563 ZCRB1Q8TBF4 217 aaKnown RBP7.45□□□□□ -1.22
LSAMP-207ENST00000539563 NYXQ9GZU5 481 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 ZBTB3Q9H5J0 574 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 WTAPQ15007 396 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 CCDC102BQ68D86 513 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 MICALCLQ6ZW33 695 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 SYCP3Q8IZU3 236 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 CCDC82Q8N4S0 544 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 STAMBPO95630 424 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 IFIT1BQ5T764 474 aaKnown RBP7.45□□□□□ -1.22
LSAMP-207ENST00000539563 UBE3BQ7Z3V4 1068 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 DDX12PQ92771 950 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 FERMT1Q9BQL6 677 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 SOS1Q07889 1333 aaPredicted RBP7.45□□□□□ -1.22
LSAMP-207ENST00000539563 PLCH2O75038 1416 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 GOLGA6L10A0A0M3HER8 536 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 TNNT1P13805 278 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 AKAP4Q5JQC9 854 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 FEZ1Q99689 392 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 FAM107BQ9H098 131 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 GRM8O00222 908 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 SSFA2P28290 1259 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 RBM25P49756 843 aaKnown RBP7.45□□□□□ -1.22
LSAMP-207ENST00000539563 TTLL12Q14166 644 aaPredicted RBP7.45□□□□□ -1.22
LSAMP-207ENST00000539563 KCNG4Q8TDN1 519 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 TBC1D32Q96NH3 1257 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 PUS7Q96PZ0 661 aaKnown RBP7.45□□□□□ -1.22
LSAMP-207ENST00000539563 CTAGE1Q96RT6 745 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 SLC26A6Q9BXS9 759 aa7.45□□□□□ -1.22
LSAMP-207ENST00000539563 MCMDC2Q4G0Z9 681 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 GOPCQ9HD26 462 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 EHBP1Q8NDI1 1231 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 EXOC1Q9NV70 894 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 ZFYVE9O95405 1425 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 CCDC40Q4G0X9 1142 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 SMARCC1Q92922 1105 aaPredicted RBP7.44□□□□□ -1.22
LSAMP-207ENST00000539563 PLCD4Q9BRC7 762 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 EIF4G3O43432 1585 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms