RNA–Protein interactions for RNA: ENST00000539476.5

PITPNA-202, Transcript of phosphatidylinositol transfer protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PITPNA, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNA-202ENST00000539476 DCCP43146 1447 aa20.34■□□□□ 0.85
PITPNA-202ENST00000539476 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
PITPNA-202ENST00000539476 ALS2Q96Q42 1657 aa20.33■□□□□ 0.85
PITPNA-202ENST00000539476 CUL4AQ13619 759 aa20.33■□□□□ 0.85
PITPNA-202ENST00000539476 GNAI3P08754 354 aa20.33■□□□□ 0.85
PITPNA-202ENST00000539476 AMPHP49418 695 aa20.33■□□□□ 0.85
PITPNA-202ENST00000539476 ZNF165P49910 485 aa20.33■□□□□ 0.85
PITPNA-202ENST00000539476 ARID5BQ14865 1188 aa20.33■□□□□ 0.85
PITPNA-202ENST00000539476 SNX14Q9Y5W7 946 aa20.33■□□□□ 0.85
PITPNA-202ENST00000539476 PHRF1Q9P1Y6 1649 aaKnown RBP20.33■□□□□ 0.84
PITPNA-202ENST00000539476 ZKSCAN1P17029 563 aaPredicted RBP20.33■□□□□ 0.84
PITPNA-202ENST00000539476 RUFY3Q7L099 469 aa20.33■□□□□ 0.84
PITPNA-202ENST00000539476 FAM177A1Q8N128 213 aaPredicted RBP20.33■□□□□ 0.84
PITPNA-202ENST00000539476 CNTROBQ8N137 903 aa20.33■□□□□ 0.84
PITPNA-202ENST00000539476 SLIT3O75094 1523 aa20.32■□□□□ 0.84
PITPNA-202ENST00000539476 FLIIQ13045 1269 aa20.32■□□□□ 0.84
PITPNA-202ENST00000539476 UTP14CQ5TAP6 766 aaKnown RBP20.32■□□□□ 0.84
PITPNA-202ENST00000539476 KDRP35968 1356 aa20.32■□□□□ 0.84
PITPNA-202ENST00000539476 KIF24Q5T7B8 1368 aa20.32■□□□□ 0.84
PITPNA-202ENST00000539476 KIF20AO95235 890 aa20.32■□□□□ 0.84
PITPNA-202ENST00000539476 EYA1Q99502 592 aa20.32■□□□□ 0.84
PITPNA-202ENST00000539476 CYP46A1Q9Y6A2 500 aa20.32■□□□□ 0.84
PITPNA-202ENST00000539476 FAM200AQ8TCP9 573 aa20.32■□□□□ 0.84
PITPNA-202ENST00000539476 IGSF1Q8N6C5 1336 aa20.31■□□□□ 0.84
PITPNA-202ENST00000539476 NCBP1Q09161 790 aaKnown RBP20.31■□□□□ 0.84
PITPNA-202ENST00000539476 PPP1R42Q7Z4L9 355 aa20.31■□□□□ 0.84
PITPNA-202ENST00000539476 POLR3GO15318 223 aaPredicted RBP20.31■□□□□ 0.84
PITPNA-202ENST00000539476 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
PITPNA-202ENST00000539476 ST7Q9NRC1 585 aa20.31■□□□□ 0.84
PITPNA-202ENST00000539476 ADCK5Q3MIX3 580 aa20.3■□□□□ 0.84
PITPNA-202ENST00000539476 CEP135Q66GS9 1140 aa20.3■□□□□ 0.84
PITPNA-202ENST00000539476 HOMER1Q86YM7 354 aa20.3■□□□□ 0.84
PITPNA-202ENST00000539476 DDX17Q92841 729 aaKnown RBP20.3■□□□□ 0.84
PITPNA-202ENST00000539476 GTF3C6Q969F1 213 aa20.3■□□□□ 0.84
PITPNA-202ENST00000539476 SIL1Q9H173 461 aa20.3■□□□□ 0.84
PITPNA-202ENST00000539476 TMX1Q9H3N1 280 aa20.3■□□□□ 0.84
PITPNA-202ENST00000539476 RGPD2P0DJD1 1756 aa20.3■□□□□ 0.84
PITPNA-202ENST00000539476 ZNF853P0CG23 659 aa20.29■□□□□ 0.84
PITPNA-202ENST00000539476 CBX8Q9HC52 389 aa20.29■□□□□ 0.84
PITPNA-202ENST00000539476 CDC37L1Q7L3B6 337 aa20.29■□□□□ 0.84
PITPNA-202ENST00000539476 CCAR2Q8N163 923 aaKnown RBP20.29■□□□□ 0.84
PITPNA-202ENST00000539476 KRT28Q7Z3Y7 464 aa20.29■□□□□ 0.84
PITPNA-202ENST00000539476 USP16Q9Y5T5 823 aa20.29■□□□□ 0.84
PITPNA-202ENST00000539476 PTPN14Q15678 1187 aa20.28■□□□□ 0.84
PITPNA-202ENST00000539476 ELF2Q15723 593 aa20.28■□□□□ 0.84
PITPNA-202ENST00000539476 IFIT2P09913 472 aaKnown RBP20.28■□□□□ 0.84
PITPNA-202ENST00000539476 ATF3P18847 181 aa20.28■□□□□ 0.84
PITPNA-202ENST00000539476 TTC6Q86TZ1 520 aa20.28■□□□□ 0.84
PITPNA-202ENST00000539476 GUCY1B3Q02153 619 aa20.28■□□□□ 0.84
PITPNA-202ENST00000539476 LRRC2Q9BYS8 371 aa20.28■□□□□ 0.84
PITPNA-202ENST00000539476 TPM3P06753 285 aa20.27■□□□□ 0.84
PITPNA-202ENST00000539476 ZNF335Q9H4Z2 1342 aaPredicted RBP20.27■□□□□ 0.84
PITPNA-202ENST00000539476 BRPF1P55201 1214 aaPredicted RBP20.27■□□□□ 0.84
PITPNA-202ENST00000539476 ANAPC15P60006 121 aa20.27■□□□□ 0.84
PITPNA-202ENST00000539476 MED1Q15648 1581 aaPredicted RBP20.27■□□□□ 0.84
PITPNA-202ENST00000539476 OGFRQ9NZT2 677 aa20.27■□□□□ 0.84
PITPNA-202ENST00000539476 ZNF215Q9UL58 517 aaPredicted RBP20.27■□□□□ 0.84
PITPNA-202ENST00000539476 GNL2Q13823 731 aaKnown RBP20.27■□□□□ 0.83
PITPNA-202ENST00000539476 PTPRCP08575 1304 aa20.26■□□□□ 0.83
PITPNA-202ENST00000539476 TNNT3P45378 269 aaPredicted RBP20.26■□□□□ 0.83
PITPNA-202ENST00000539476 GTF2F1P35269 517 aaKnown RBP eCLIP20.26■□□□□ 0.831e-7■■■■■ 39.4
PITPNA-202ENST00000539476 HDGFL1Q5TGJ6 251 aa20.26■□□□□ 0.83
PITPNA-202ENST00000539476 HSPA4P34932 840 aa20.25■□□□□ 0.83
PITPNA-202ENST00000539476 PHAXQ9H814 394 aaKnown RBP20.25■□□□□ 0.83
PITPNA-202ENST00000539476 MTMR6Q9Y217 621 aa20.25■□□□□ 0.83
PITPNA-202ENST00000539476 SMC2O95347 1197 aa20.25■□□□□ 0.83
PITPNA-202ENST00000539476 SKILP12757 684 aa20.25■□□□□ 0.83
PITPNA-202ENST00000539476 PTH1RQ03431 593 aa20.25■□□□□ 0.83
PITPNA-202ENST00000539476 PDE4CQ08493 712 aa20.25■□□□□ 0.83
PITPNA-202ENST00000539476 ISM2Q6H9L7 571 aa20.25■□□□□ 0.83
PITPNA-202ENST00000539476 RHPN1Q8TCX5 695 aa20.25■□□□□ 0.83
PITPNA-202ENST00000539476 CACTINQ8WUQ7 758 aaKnown RBP20.25■□□□□ 0.83
PITPNA-202ENST00000539476 IP6K1Q92551 441 aa20.25■□□□□ 0.83
PITPNA-202ENST00000539476 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
PITPNA-202ENST00000539476 PA2G4Q9UQ80 394 aaKnown RBP20.24■□□□□ 0.83
PITPNA-202ENST00000539476 GCP02774 474 aa20.24■□□□□ 0.83
PITPNA-202ENST00000539476 CCDC8Q9H0W5 538 aaPredicted RBP20.24■□□□□ 0.83
PITPNA-202ENST00000539476 SPTLC3Q9NUV7 552 aa20.24■□□□□ 0.83
PITPNA-202ENST00000539476 MTHFSDQ2M296 383 aaKnown RBP20.23■□□□□ 0.83
PITPNA-202ENST00000539476 CCDC30Q5VVM6 783 aa20.23■□□□□ 0.83
PITPNA-202ENST00000539476 C9orf78Q9NZ63 289 aaPredicted RBP20.23■□□□□ 0.83
PITPNA-202ENST00000539476 RGPD5Q99666 1765 aa20.23■□□□□ 0.83
PITPNA-202ENST00000539476 USP27XA6NNY8 438 aa20.23■□□□□ 0.83
PITPNA-202ENST00000539476 CHL1O00533 1208 aa20.23■□□□□ 0.83
PITPNA-202ENST00000539476 ME3Q16798 604 aa20.23■□□□□ 0.83
PITPNA-202ENST00000539476 ATP8B2P98198 1209 aa20.23■□□□□ 0.83
PITPNA-202ENST00000539476 CLASRPQ8N2M8 674 aaKnown RBP20.23■□□□□ 0.83
PITPNA-202ENST00000539476 RUFY2Q8WXA3 655 aa20.23■□□□□ 0.83
PITPNA-202ENST00000539476 MRVI1Q9Y6F6 885 aa20.23■□□□□ 0.83
PITPNA-202ENST00000539476 ATP10DQ9P241 1426 aa20.23■□□□□ 0.83
PITPNA-202ENST00000539476 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
PITPNA-202ENST00000539476 KRT222Q8N1A0 295 aa20.22■□□□□ 0.83
PITPNA-202ENST00000539476 USHBP1Q8N6Y0 703 aa20.22■□□□□ 0.83
PITPNA-202ENST00000539476 KCNH5Q8NCM2 988 aa20.22■□□□□ 0.83
PITPNA-202ENST00000539476 FSD1Q9BTV5 496 aa20.22■□□□□ 0.83
PITPNA-202ENST00000539476 PXDNQ92626 1479 aa20.22■□□□□ 0.83
PITPNA-202ENST00000539476 SMTNL1A8MU46 457 aa20.22■□□□□ 0.83
PITPNA-202ENST00000539476 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
PITPNA-202ENST00000539476 BOLA2Q9H3K6 86 aa20.22■□□□□ 0.83
PITPNA-202ENST00000539476 CRYBG1Q9Y4K1 1723 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms