RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 SOX12O15370 315 aa20.36■□□□□ 0.85
C2CD3-213ENST00000539061 PSMA5P28066 241 aa20.36■□□□□ 0.85
C2CD3-213ENST00000539061 TERF2Q15554 542 aa20.36■□□□□ 0.85
C2CD3-213ENST00000539061 DDX54Q8TDD1 881 aaKnown RBP20.36■□□□□ 0.85
C2CD3-213ENST00000539061 KDRP35968 1356 aa20.36■□□□□ 0.85
C2CD3-213ENST00000539061 USP31Q70CQ4 1352 aa20.36■□□□□ 0.85
C2CD3-213ENST00000539061 LRRC8AQ8IWT6 810 aa20.36■□□□□ 0.85
C2CD3-213ENST00000539061 KCNJ4P48050 445 aa20.35■□□□□ 0.85
C2CD3-213ENST00000539061 RBM6P78332 1123 aaKnown RBP20.35■□□□□ 0.85
C2CD3-213ENST00000539061 OS9Q13438 667 aaPredicted RBP20.35■□□□□ 0.85
C2CD3-213ENST00000539061 CREB3L3Q68CJ9 461 aa20.35■□□□□ 0.85
C2CD3-213ENST00000539061 CACNA1FO60840 1977 aa20.35■□□□□ 0.85
C2CD3-213ENST00000539061 ACEP12821 1306 aa20.35■□□□□ 0.85
C2CD3-213ENST00000539061 NR1I2O75469 434 aa20.35■□□□□ 0.85
C2CD3-213ENST00000539061 ANKRD1Q15327 319 aa20.35■□□□□ 0.85
C2CD3-213ENST00000539061 PTPN14Q15678 1187 aa20.35■□□□□ 0.85
C2CD3-213ENST00000539061 BICD2Q8TD16 824 aa20.35■□□□□ 0.85
C2CD3-213ENST00000539061 RBM8AQ9Y5S9 174 aaKnown RBP20.35■□□□□ 0.85
C2CD3-213ENST00000539061 ADGRL3Q9HAR2 1447 aa20.35■□□□□ 0.85
C2CD3-213ENST00000539061 GNAT3A8MTJ3 354 aa20.34■□□□□ 0.85
C2CD3-213ENST00000539061 GOLGA6L19H0YKK7 550 aa20.34■□□□□ 0.85
C2CD3-213ENST00000539061 CLASRPQ8N2M8 674 aaKnown RBP20.34■□□□□ 0.85
C2CD3-213ENST00000539061 N4BP2Q86UW6 1770 aaPredicted RBP20.34■□□□□ 0.85
C2CD3-213ENST00000539061 CCDC66A2RUB6 948 aa20.34■□□□□ 0.85
C2CD3-213ENST00000539061 SARM1Q6SZW1 724 aa20.34■□□□□ 0.85
C2CD3-213ENST00000539061 PHAXQ9H814 394 aaKnown RBP20.34■□□□□ 0.85
C2CD3-213ENST00000539061 ECHDC1Q9NTX5 307 aa20.34■□□□□ 0.85
C2CD3-213ENST00000539061 CRYBG1Q9Y4K1 1723 aa20.34■□□□□ 0.85
C2CD3-213ENST00000539061 KMT5BQ4FZB7 885 aa20.33■□□□□ 0.85
C2CD3-213ENST00000539061 HDGFL1Q5TGJ6 251 aa20.33■□□□□ 0.85
C2CD3-213ENST00000539061 GPATCH3Q96I76 525 aa20.33■□□□□ 0.85
C2CD3-213ENST00000539061 ZNF215Q9UL58 517 aaPredicted RBP20.33■□□□□ 0.85
C2CD3-213ENST00000539061 NBPF7P0C2Y1 421 aaPredicted RBP20.33■□□□□ 0.85
C2CD3-213ENST00000539061 BBXQ8WY36 941 aaPredicted RBP20.33■□□□□ 0.85
C2CD3-213ENST00000539061 MRFAP1L1Q96HT8 127 aa20.33■□□□□ 0.85
C2CD3-213ENST00000539061 EYA1Q99502 592 aa20.33■□□□□ 0.85
C2CD3-213ENST00000539061 BABAM1Q9NWV8 329 aa20.33■□□□□ 0.85
C2CD3-213ENST00000539061 EVI5LQ96CN4 794 aa20.33■□□□□ 0.84
C2CD3-213ENST00000539061 CEBPAP49715 358 aaPredicted RBP20.32■□□□□ 0.84
C2CD3-213ENST00000539061 LARP1Q6PKG0 1096 aaKnown RBP20.32■□□□□ 0.84
C2CD3-213ENST00000539061 NYAP1Q6ZVC0 841 aa20.32■□□□□ 0.84
C2CD3-213ENST00000539061 MAP4K1Q92918 833 aa20.32■□□□□ 0.84
C2CD3-213ENST00000539061 ERO1AQ96HE7 468 aa20.32■□□□□ 0.84
C2CD3-213ENST00000539061 IGSF1Q8N6C5 1336 aa20.32■□□□□ 0.84
C2CD3-213ENST00000539061 TAF7Q15545 349 aaPredicted RBP20.32■□□□□ 0.84
C2CD3-213ENST00000539061 PGBD1Q96JS3 809 aa20.32■□□□□ 0.84
C2CD3-213ENST00000539061 BLOC1S2Q6QNY1 142 aa20.31■□□□□ 0.84
C2CD3-213ENST00000539061 FAM53CQ9NYF3 392 aa20.31■□□□□ 0.84
C2CD3-213ENST00000539061 FLT4P35916 1363 aa20.31■□□□□ 0.84
C2CD3-213ENST00000539061 TECPR2O15040 1411 aa20.31■□□□□ 0.84
C2CD3-213ENST00000539061 RIMS1Q86UR5 1692 aaKnown RBP20.31■□□□□ 0.84
C2CD3-213ENST00000539061 PLEKHG3A1L390 1219 aa20.31■□□□□ 0.84
C2CD3-213ENST00000539061 SKILP12757 684 aa20.31■□□□□ 0.84
C2CD3-213ENST00000539061 IQCB1Q15051 598 aa20.31■□□□□ 0.84
C2CD3-213ENST00000539061 USP27XA6NNY8 438 aa20.3■□□□□ 0.84
C2CD3-213ENST00000539061 SLC27A2O14975 620 aa20.3■□□□□ 0.84
C2CD3-213ENST00000539061 SLFNL1Q499Z3 407 aa20.3■□□□□ 0.84
C2CD3-213ENST00000539061 ALDH8A1Q9H2A2 487 aaPredicted RBP20.3■□□□□ 0.84
C2CD3-213ENST00000539061 SBNO1A3KN83 1393 aa20.3■□□□□ 0.84
C2CD3-213ENST00000539061 HIP1O00291 1037 aa20.3■□□□□ 0.84
C2CD3-213ENST00000539061 GIGYF1O75420 1035 aaPredicted RBP20.3■□□□□ 0.84
C2CD3-213ENST00000539061 RNF20Q5VTR2 975 aa20.3■□□□□ 0.84
C2CD3-213ENST00000539061 USP6P35125 1406 aa20.3■□□□□ 0.84
C2CD3-213ENST00000539061 IFIT2P09913 472 aaKnown RBP20.29■□□□□ 0.84
C2CD3-213ENST00000539061 FAM193AP78312 1265 aa20.29■□□□□ 0.84
C2CD3-213ENST00000539061 BCL11BQ9C0K0 894 aaPredicted RBP20.29■□□□□ 0.84
C2CD3-213ENST00000539061 TMEM51Q9NW97 253 aa20.29■□□□□ 0.84
C2CD3-213ENST00000539061 CHD2O14647 1828 aaKnown RBP20.29■□□□□ 0.84
C2CD3-213ENST00000539061 ARID5BQ14865 1188 aa20.28■□□□□ 0.84
C2CD3-213ENST00000539061 FBXO38Q6PIJ6 1188 aa20.28■□□□□ 0.84
C2CD3-213ENST00000539061 NALCNQ8IZF0 1738 aa20.28■□□□□ 0.84
C2CD3-213ENST00000539061 IL17REQ8NFR9 667 aa20.28■□□□□ 0.84
C2CD3-213ENST00000539061 NRXN3Q9Y4C0 1643 aa20.28■□□□□ 0.84
C2CD3-213ENST00000539061 RPS6KB1P23443 525 aa20.28■□□□□ 0.84
C2CD3-213ENST00000539061 GTF2E1P29083 439 aaPredicted RBP20.28■□□□□ 0.84
C2CD3-213ENST00000539061 AMPHP49418 695 aa20.28■□□□□ 0.84
C2CD3-213ENST00000539061 BEND3Q5T5X7 828 aa20.28■□□□□ 0.84
C2CD3-213ENST00000539061 LRRC37A3O60309 1634 aa20.28■□□□□ 0.84
C2CD3-213ENST00000539061 KIF2AO00139 706 aaPredicted RBP20.27■□□□□ 0.84
C2CD3-213ENST00000539061 SLU7O95391 586 aaKnown RBP20.27■□□□□ 0.84
C2CD3-213ENST00000539061 DNAAF4Q8WXU2 420 aa20.27■□□□□ 0.84
C2CD3-213ENST00000539061 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.27■□□□□ 0.84
C2CD3-213ENST00000539061 V9GYY5 206 aaPredicted RBP20.27■□□□□ 0.84
C2CD3-213ENST00000539061 CCDC69A6NI79 296 aa20.27■□□□□ 0.84
C2CD3-213ENST00000539061 CTAGE5O15320 804 aa20.27■□□□□ 0.84
C2CD3-213ENST00000539061 ELF2Q15723 593 aa20.27■□□□□ 0.84
C2CD3-213ENST00000539061 CEP170BQ9Y4F5 1589 aaPredicted RBP20.27■□□□□ 0.84
C2CD3-213ENST00000539061 STX1AQ16623 288 aa20.26■□□□□ 0.83
C2CD3-213ENST00000539061 ERC1Q8IUD2 1116 aa20.26■□□□□ 0.83
C2CD3-213ENST00000539061 TCEANC2Q96MN5 208 aa20.26■□□□□ 0.83
C2CD3-213ENST00000539061 CFAP45Q9UL16 551 aa20.26■□□□□ 0.83
C2CD3-213ENST00000539061 BECN2A8MW95 431 aa20.26■□□□□ 0.83
C2CD3-213ENST00000539061 NMIQ13287 307 aaPredicted RBP20.26■□□□□ 0.83
C2CD3-213ENST00000539061 TOB2Q14106 344 aaPredicted RBP20.26■□□□□ 0.83
C2CD3-213ENST00000539061 CREBRFQ8IUR6 639 aa20.26■□□□□ 0.83
C2CD3-213ENST00000539061 CCAR2Q8N163 923 aaKnown RBP20.26■□□□□ 0.83
C2CD3-213ENST00000539061 FAM227BQ96M60 508 aa20.26■□□□□ 0.83
C2CD3-213ENST00000539061 KCND1Q9NSA2 647 aa20.26■□□□□ 0.83
C2CD3-213ENST00000539061 MTX1Q13505 466 aa20.26■□□□□ 0.83
C2CD3-213ENST00000539061 C11orf57Q6ZUT1 292 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms