RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 NBPF7P0C2Y1 421 aaPredicted RBP19.22■□□□□ 0.67
VAMP1-207ENST00000539047 PARP10Q53GL7 1025 aa19.22■□□□□ 0.67
VAMP1-207ENST00000539047 UBE3BQ7Z3V4 1068 aa19.22■□□□□ 0.67
VAMP1-207ENST00000539047 NARFQ9UHQ1 456 aa19.22■□□□□ 0.67
VAMP1-207ENST00000539047 TUBGCP6Q96RT7 1819 aa19.22■□□□□ 0.67
VAMP1-207ENST00000539047 HSP90B1P14625 803 aaKnown RBP19.21■□□□□ 0.67
VAMP1-207ENST00000539047 GPTP24298 496 aa19.21■□□□□ 0.67
VAMP1-207ENST00000539047 HLFQ16534 295 aa19.21■□□□□ 0.67
VAMP1-207ENST00000539047 QSER1Q2KHR3 1735 aa19.21■□□□□ 0.67
VAMP1-207ENST00000539047 GCC1Q96CN9 775 aa19.21■□□□□ 0.67
VAMP1-207ENST00000539047 COL24A1Q17RW2 1714 aa19.2■□□□□ 0.66
VAMP1-207ENST00000539047 EZH2Q15910 746 aaKnown RBP19.2■□□□□ 0.66
VAMP1-207ENST00000539047 FLAD1Q8NFF5 587 aa19.2■□□□□ 0.66
VAMP1-207ENST00000539047 IGHDP01880 384 aa19.19■□□□□ 0.66
VAMP1-207ENST00000539047 PCCAP05165 728 aaPredicted RBP19.19■□□□□ 0.66
VAMP1-207ENST00000539047 PPP1R42Q7Z4L9 355 aa19.19■□□□□ 0.66
VAMP1-207ENST00000539047 NLRP10Q86W26 655 aa19.19■□□□□ 0.66
VAMP1-207ENST00000539047 TFCP2L1Q9NZI6 479 aa19.19■□□□□ 0.66
VAMP1-207ENST00000539047 NIP7Q9Y221 180 aaKnown RBP eCLIP19.19■□□□□ 0.66
VAMP1-207ENST00000539047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.18■□□□□ 0.66
VAMP1-207ENST00000539047 ATP8B2P98198 1209 aa19.18■□□□□ 0.66
VAMP1-207ENST00000539047 ZNF34Q8IZ26 560 aa19.18■□□□□ 0.66
VAMP1-207ENST00000539047 ZBTB38Q8NAP3 1195 aaPredicted RBP19.18■□□□□ 0.66
VAMP1-207ENST00000539047 ARHGEF1Q92888 912 aaKnown RBP19.18■□□□□ 0.66
VAMP1-207ENST00000539047 SUCLG2Q96I99 432 aa19.18■□□□□ 0.66
VAMP1-207ENST00000539047 USP42Q9H9J4 1324 aaKnown RBP19.18■□□□□ 0.66
VAMP1-207ENST00000539047 H7C1W4 665 aa19.17■□□□□ 0.66
VAMP1-207ENST00000539047 SRGAP3O43295 1099 aa19.17■□□□□ 0.66
VAMP1-207ENST00000539047 USPL1Q5W0Q7 1092 aa19.17■□□□□ 0.66
VAMP1-207ENST00000539047 TRMT112Q9UI30 125 aaKnown RBP19.17■□□□□ 0.66
VAMP1-207ENST00000539047 CDHR2Q9BYE9 1310 aa19.17■□□□□ 0.66
VAMP1-207ENST00000539047 MTX1Q13505 466 aa19.16■□□□□ 0.66
VAMP1-207ENST00000539047 PROM2Q8N271 834 aa19.16■□□□□ 0.66
VAMP1-207ENST00000539047 UTP14AQ9BVJ6 771 aaKnown RBP19.16■□□□□ 0.66
VAMP1-207ENST00000539047 BICC1Q9H694 974 aaKnown RBP19.16■□□□□ 0.66
VAMP1-207ENST00000539047 STK32BQ9NY57 414 aa19.16■□□□□ 0.66
VAMP1-207ENST00000539047 R3HDM1Q15032 1099 aaKnown RBP19.15■□□□□ 0.66
VAMP1-207ENST00000539047 HSP90AB4PQ58FF6 505 aa19.15■□□□□ 0.66
VAMP1-207ENST00000539047 SMC5Q8IY18 1101 aa19.15■□□□□ 0.66
VAMP1-207ENST00000539047 CAMKK2Q96RR4 588 aa19.15■□□□□ 0.66
VAMP1-207ENST00000539047 NYXQ9GZU5 481 aa19.15■□□□□ 0.66
VAMP1-207ENST00000539047 SH3TC1Q8TE82 1336 aa19.15■□□□□ 0.66
VAMP1-207ENST00000539047 RTL5Q5HYW3 569 aaPredicted RBP19.14■□□□□ 0.65
VAMP1-207ENST00000539047 SIRT2Q8IXJ6 389 aa19.14■□□□□ 0.65
VAMP1-207ENST00000539047 SETDB2Q96T68 719 aa19.14■□□□□ 0.65
VAMP1-207ENST00000539047 SRP68Q9UHB9 627 aaKnown RBP19.14■□□□□ 0.65
VAMP1-207ENST00000539047 UBN2Q6ZU65 1347 aa19.14■□□□□ 0.65
VAMP1-207ENST00000539047 DDX60Q8IY21 1712 aaKnown RBP19.14■□□□□ 0.65
VAMP1-207ENST00000539047 NPHP1O15259 732 aa19.13■□□□□ 0.65
VAMP1-207ENST00000539047 SSH3Q8TE77 659 aa19.13■□□□□ 0.65
VAMP1-207ENST00000539047 AKT1S1Q96B36 256 aa19.13■□□□□ 0.65
VAMP1-207ENST00000539047 CHMP3Q9Y3E7 222 aa19.13■□□□□ 0.65
VAMP1-207ENST00000539047 CARMIL3Q8ND23 1372 aa19.13■□□□□ 0.65
VAMP1-207ENST00000539047 CASZ1Q86V15 1759 aa19.13■□□□□ 0.65
VAMP1-207ENST00000539047 PNMA6EA0A0J9YXQ4 647 aa19.12■□□□□ 0.65
VAMP1-207ENST00000539047 GTF2E1P29083 439 aaPredicted RBP19.12■□□□□ 0.65
VAMP1-207ENST00000539047 CASP7P55210 303 aa19.12■□□□□ 0.65
VAMP1-207ENST00000539047 OS9Q13438 667 aaPredicted RBP19.12■□□□□ 0.65
VAMP1-207ENST00000539047 BICDL1Q6ZP65 573 aa19.12■□□□□ 0.65
VAMP1-207ENST00000539047 FAM89AQ96GI7 184 aa19.12■□□□□ 0.65
VAMP1-207ENST00000539047 DCTPP1Q9H773 170 aa19.12■□□□□ 0.65
VAMP1-207ENST00000539047 FAM177BA6PVY3 158 aa19.11■□□□□ 0.65
VAMP1-207ENST00000539047 POLA2Q14181 598 aa19.11■□□□□ 0.65
VAMP1-207ENST00000539047 ZNF827Q17R98 1081 aa19.11■□□□□ 0.65
VAMP1-207ENST00000539047 RABL6Q3YEC7 729 aaPredicted RBP19.11■□□□□ 0.65
VAMP1-207ENST00000539047 JARID2Q92833 1246 aaPredicted RBP19.11■□□□□ 0.65
VAMP1-207ENST00000539047 PLA2G12BQ9BX93 195 aa19.11■□□□□ 0.65
VAMP1-207ENST00000539047 IRS4O14654 1257 aaPredicted RBP19.1■□□□□ 0.65
VAMP1-207ENST00000539047 SUSD4Q5VX71 490 aa19.1■□□□□ 0.65
VAMP1-207ENST00000539047 TBC1D9BQ66K14 1250 aa19.1■□□□□ 0.65
VAMP1-207ENST00000539047 NBPF5PQ86XG9 351 aaPredicted RBP19.1■□□□□ 0.65
VAMP1-207ENST00000539047 ERC1Q8IUD2 1116 aa19.1■□□□□ 0.65
VAMP1-207ENST00000539047 PDE8AO60658 829 aa19.09■□□□□ 0.65
VAMP1-207ENST00000539047 RAB11FIP3O75154 756 aa19.09■□□□□ 0.65
VAMP1-207ENST00000539047 SURF6O75683 361 aaKnown RBP19.09■□□□□ 0.65
VAMP1-207ENST00000539047 NUCB1Q02818 461 aa19.09■□□□□ 0.65
VAMP1-207ENST00000539047 ANKRD45Q5TZF3 282 aa19.09■□□□□ 0.65
VAMP1-207ENST00000539047 LMBR1LQ6UX01 489 aa19.09■□□□□ 0.65
VAMP1-207ENST00000539047 SMIM5Q71RC9 77 aa19.09■□□□□ 0.65
VAMP1-207ENST00000539047 KAZALD1Q96I82 304 aa19.09■□□□□ 0.65
VAMP1-207ENST00000539047 BCL2L12Q9HB09 334 aa19.09■□□□□ 0.65
VAMP1-207ENST00000539047 PDZRN3Q9UPQ7 1066 aa19.09■□□□□ 0.65
VAMP1-207ENST00000539047 NTSR2O95665 410 aa19.08■□□□□ 0.64
VAMP1-207ENST00000539047 CTSWP56202 376 aa19.08■□□□□ 0.64
VAMP1-207ENST00000539047 FOXO4P98177 505 aa19.08■□□□□ 0.64
VAMP1-207ENST00000539047 TAF7LQ5H9L4 462 aa19.08■□□□□ 0.64
VAMP1-207ENST00000539047 AMIGO3Q86WK7 504 aa19.08■□□□□ 0.64
VAMP1-207ENST00000539047 SLC15A2Q16348 729 aa19.07■□□□□ 0.64
VAMP1-207ENST00000539047 CCDC57Q2TAC2 916 aa19.07■□□□□ 0.64
VAMP1-207ENST00000539047 TPTE2Q6XPS3 522 aa19.07■□□□□ 0.64
VAMP1-207ENST00000539047 CHD1LQ86WJ1 897 aa19.07■□□□□ 0.64
VAMP1-207ENST00000539047 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
VAMP1-207ENST00000539047 LRRCC1Q9C099 1032 aa19.07■□□□□ 0.64
VAMP1-207ENST00000539047 EXOC6BQ9Y2D4 811 aa19.07■□□□□ 0.64
VAMP1-207ENST00000539047 APBB1O00213 710 aa19.06■□□□□ 0.64
VAMP1-207ENST00000539047 GYS1P13807 737 aa19.06■□□□□ 0.64
VAMP1-207ENST00000539047 G3BP1Q13283 466 aaKnown RBP eCLIP19.06■□□□□ 0.64
VAMP1-207ENST00000539047 EPHA10Q5JZY3 1008 aa19.06■□□□□ 0.64
VAMP1-207ENST00000539047 NLGN1Q8N2Q7 840 aa19.06■□□□□ 0.64
VAMP1-207ENST00000539047 LRP5O75197 1615 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms