RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 CHMP4BQ9H444 224 aaKnown RBP10.84□□□□□ -0.67
LPCAT3-208ENST00000538987 RNF123Q5XPI4 1314 aa10.84□□□□□ -0.67
LPCAT3-208ENST00000538987 SERPINB2P05120 415 aa10.83□□□□□ -0.68
LPCAT3-208ENST00000538987 TM4SF1P30408 202 aa10.83□□□□□ -0.68
LPCAT3-208ENST00000538987 TRIM28Q13263 835 aaKnown RBP10.83□□□□□ -0.68
LPCAT3-208ENST00000538987 MVPQ14764 893 aaKnown RBP10.83□□□□□ -0.68
LPCAT3-208ENST00000538987 FAM89AQ96GI7 184 aa10.83□□□□□ -0.68
LPCAT3-208ENST00000538987 CRBNQ96SW2 442 aa10.83□□□□□ -0.68
LPCAT3-208ENST00000538987 NYXQ9GZU5 481 aa10.83□□□□□ -0.68
LPCAT3-208ENST00000538987 MTFR1LQ9H019 292 aa10.83□□□□□ -0.68
LPCAT3-208ENST00000538987 DDX19BQ9UMR2 479 aa10.83□□□□□ -0.68
LPCAT3-208ENST00000538987 UBR3Q6ZT12 1888 aa10.83□□□□□ -0.68
LPCAT3-208ENST00000538987 CARMIL3Q8ND23 1372 aa10.82□□□□□ -0.68
LPCAT3-208ENST00000538987 GRM8O00222 908 aa10.82□□□□□ -0.68
LPCAT3-208ENST00000538987 GNAI3P08754 354 aa10.82□□□□□ -0.68
LPCAT3-208ENST00000538987 UBTFL1P0CB47 393 aaPredicted RBP10.82□□□□□ -0.68
LPCAT3-208ENST00000538987 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
LPCAT3-208ENST00000538987 CCDC24Q8N4L8 307 aa10.82□□□□□ -0.68
LPCAT3-208ENST00000538987 ZBTB38Q8NAP3 1195 aaPredicted RBP10.82□□□□□ -0.68
LPCAT3-208ENST00000538987 HDAC5Q9UQL6 1122 aa10.82□□□□□ -0.68
LPCAT3-208ENST00000538987 ATP10DQ9P241 1426 aa10.82□□□□□ -0.68
LPCAT3-208ENST00000538987 UBN2Q6ZU65 1347 aa10.82□□□□□ -0.68
LPCAT3-208ENST00000538987 POLRMTO00411 1230 aaKnown RBP10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 ZBTB7BO15156 539 aaPredicted RBP10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 PCCAP05165 728 aaPredicted RBP10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 HSP90B1P14625 803 aaKnown RBP10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 ST5P78524 1137 aa10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 ERFEQ4G0M1 354 aa10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 NUTM1Q86Y26 1132 aa10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 CNBD1Q8NA66 436 aa10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 USP44Q9H0E7 712 aa10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 CACNA1FO60840 1977 aa10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 SH3TC1Q8TE82 1336 aa10.81□□□□□ -0.68
LPCAT3-208ENST00000538987 H7C1W4 665 aa10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 IRS4O14654 1257 aaPredicted RBP10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 NBPF7P0C2Y1 421 aaPredicted RBP10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 DDR1Q08345 913 aa10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 SYNE4Q8N205 404 aa10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 KLHL34Q8N239 644 aa10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 EXOC6Q8TAG9 804 aa10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 MEIS3Q99687 375 aa10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 SPON1Q9HCB6 807 aa10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 PPP1R1BQ9UD71 204 aaPredicted RBP10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 PXDNLA1KZ92 1463 aa10.8□□□□□ -0.68
LPCAT3-208ENST00000538987 NTSR2O95665 410 aa10.79□□□□□ -0.68
LPCAT3-208ENST00000538987 GNAI2P04899 355 aa10.79□□□□□ -0.68
LPCAT3-208ENST00000538987 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
LPCAT3-208ENST00000538987 ARFGEF2Q9Y6D5 1785 aa10.78□□□□□ -0.68
LPCAT3-208ENST00000538987 PRR5LQ6MZQ0 368 aa10.78□□□□□ -0.68
LPCAT3-208ENST00000538987 NLRP3Q96P20 1036 aa10.78□□□□□ -0.68
LPCAT3-208ENST00000538987 C1orf115Q9H7X2 142 aa10.78□□□□□ -0.68
LPCAT3-208ENST00000538987 CHMP3Q9Y3E7 222 aa10.78□□□□□ -0.68
LPCAT3-208ENST00000538987 LRRFIP2Q9Y608 721 aaKnown RBP10.78□□□□□ -0.68
LPCAT3-208ENST00000538987 C4AP0C0L4 1744 aa10.78□□□□□ -0.68
LPCAT3-208ENST00000538987 PDE8AO60658 829 aa10.77□□□□□ -0.69
LPCAT3-208ENST00000538987 SUCLG2Q96I99 432 aa10.77□□□□□ -0.69
LPCAT3-208ENST00000538987 CCDC85AQ96PX6 553 aaPredicted RBP10.77□□□□□ -0.69
LPCAT3-208ENST00000538987 ZBTB40Q9NUA8 1239 aa10.77□□□□□ -0.69
LPCAT3-208ENST00000538987 UTYO14607 1347 aa10.77□□□□□ -0.69
LPCAT3-208ENST00000538987 TUBGCP6Q96RT7 1819 aa10.77□□□□□ -0.69
LPCAT3-208ENST00000538987 SCN7AQ01118 1682 aa10.76□□□□□ -0.69
LPCAT3-208ENST00000538987 PDE6BP35913 854 aa10.76□□□□□ -0.69
LPCAT3-208ENST00000538987 CASP7P55210 303 aa10.76□□□□□ -0.69
LPCAT3-208ENST00000538987 SLC10A5Q5PT55 438 aa10.76□□□□□ -0.69
LPCAT3-208ENST00000538987 LMBR1LQ6UX01 489 aa10.76□□□□□ -0.69
LPCAT3-208ENST00000538987 BRIP1Q9BX63 1249 aa10.76□□□□□ -0.69
LPCAT3-208ENST00000538987 BICC1Q9H694 974 aaKnown RBP10.76□□□□□ -0.69
LPCAT3-208ENST00000538987 NUP98P52948 1817 aa10.76□□□□□ -0.69
LPCAT3-208ENST00000538987 CDHR2Q9BYE9 1310 aa10.76□□□□□ -0.69
LPCAT3-208ENST00000538987 QSER1Q2KHR3 1735 aa10.75□□□□□ -0.69
LPCAT3-208ENST00000538987 BCORQ6W2J9 1755 aa10.75□□□□□ -0.69
LPCAT3-208ENST00000538987 CCDC152Q4G0S7 254 aa10.75□□□□□ -0.69
LPCAT3-208ENST00000538987 RPGRQ92834 1020 aaKnown RBP10.75□□□□□ -0.69
LPCAT3-208ENST00000538987 IBTKQ9P2D0 1353 aaPredicted RBP10.75□□□□□ -0.69
LPCAT3-208ENST00000538987 H0YIN7 160 aa10.74□□□□□ -0.69
LPCAT3-208ENST00000538987 PTGER2P43116 358 aa10.74□□□□□ -0.69
LPCAT3-208ENST00000538987 CTSWP56202 376 aa10.74□□□□□ -0.69
LPCAT3-208ENST00000538987 FOXO4P98177 505 aa10.74□□□□□ -0.69
LPCAT3-208ENST00000538987 AAMPQ13685 434 aa10.74□□□□□ -0.69
LPCAT3-208ENST00000538987 CCDC57Q2TAC2 916 aa10.74□□□□□ -0.69
LPCAT3-208ENST00000538987 TAF7LQ5H9L4 462 aa10.74□□□□□ -0.69
LPCAT3-208ENST00000538987 EPHA10Q5JZY3 1008 aa10.74□□□□□ -0.69
LPCAT3-208ENST00000538987 SRGAP3O43295 1099 aa10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 IFIT5Q13325 482 aaKnown RBP10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 DDX46Q7L014 1031 aaKnown RBP10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 C2CD5Q86YS7 1000 aa10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 RPAP2Q8IXW5 612 aaPredicted RBP10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 TTLL11Q8NHH1 800 aa10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 ZNF622Q969S3 477 aaKnown RBP eCLIP10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 RBM17Q96I25 401 aaKnown RBP10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 KAZALD1Q96I82 304 aa10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 PLA2G12BQ9BX93 195 aa10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 ABCC12Q96J65 1359 aa10.73□□□□□ -0.69
LPCAT3-208ENST00000538987 AFDNP55196 1824 aaKnown RBP10.72□□□□□ -0.69
LPCAT3-208ENST00000538987 ANKRD18BA2A2Z9 1011 aa10.72□□□□□ -0.69
LPCAT3-208ENST00000538987 HMMRO75330 724 aa10.72□□□□□ -0.69
LPCAT3-208ENST00000538987 CSF1RP07333 972 aa10.72□□□□□ -0.69
LPCAT3-208ENST00000538987 ATP8B2P98198 1209 aa10.72□□□□□ -0.69
LPCAT3-208ENST00000538987 SF3B3Q15393 1217 aaKnown RBP10.72□□□□□ -0.69
LPCAT3-208ENST00000538987 CEP85Q6P2H3 762 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms