RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 HSP90AB4PQ58FF6 505 aa17.28■□□□□ 0.36
ACTN1-205ENST00000538545 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
ACTN1-205ENST00000538545 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
ACTN1-205ENST00000538545 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
ACTN1-205ENST00000538545 NUP188Q5SRE5 1749 aa17.28■□□□□ 0.36
ACTN1-205ENST00000538545 NFKBIBQ15653 356 aa17.28■□□□□ 0.36
ACTN1-205ENST00000538545 BOLA2Q9H3K6 86 aa17.28■□□□□ 0.36
ACTN1-205ENST00000538545 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.36
ACTN1-205ENST00000538545 PALD1Q9ULE6 856 aa17.27■□□□□ 0.36
ACTN1-205ENST00000538545 SLIT2O94813 1529 aa17.27■□□□□ 0.36
ACTN1-205ENST00000538545 WNK3Q9BYP7 1800 aa17.27■□□□□ 0.36
ACTN1-205ENST00000538545 CWC27Q6UX04 472 aaKnown RBP17.27■□□□□ 0.35
ACTN1-205ENST00000538545 CHGBP05060 677 aa17.26■□□□□ 0.35
ACTN1-205ENST00000538545 ATP6V1AP38606 617 aa17.26■□□□□ 0.35
ACTN1-205ENST00000538545 AK9Q5TCS8 1911 aa17.26■□□□□ 0.35
ACTN1-205ENST00000538545 HSCBQ8IWL3 235 aa17.26■□□□□ 0.35
ACTN1-205ENST00000538545 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
ACTN1-205ENST00000538545 RABL6Q3YEC7 729 aaPredicted RBP17.26■□□□□ 0.35
ACTN1-205ENST00000538545 LRRC24Q50LG9 513 aa17.26■□□□□ 0.35
ACTN1-205ENST00000538545 PUS3Q9BZE2 481 aaKnown RBP17.26■□□□□ 0.35
ACTN1-205ENST00000538545 ITPK1Q13572 414 aa17.25■□□□□ 0.35
ACTN1-205ENST00000538545 ANTXR1Q9H6X2 564 aa17.25■□□□□ 0.35
ACTN1-205ENST00000538545 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
ACTN1-205ENST00000538545 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
ACTN1-205ENST00000538545 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
ACTN1-205ENST00000538545 ECHDC1Q9NTX5 307 aa17.25■□□□□ 0.35
ACTN1-205ENST00000538545 BCL9LQ86UU0 1499 aa17.25■□□□□ 0.35
ACTN1-205ENST00000538545 TJP1Q07157 1748 aa17.25■□□□□ 0.35
ACTN1-205ENST00000538545 CCDC191Q8NCU4 936 aa17.24■□□□□ 0.35
ACTN1-205ENST00000538545 ISCA1Q9BUE6 129 aa17.24■□□□□ 0.35
ACTN1-205ENST00000538545 DBNLQ9UJU6 430 aaKnown RBP17.24■□□□□ 0.35
ACTN1-205ENST00000538545 THRAP3Q9Y2W1 955 aaKnown RBP17.24■□□□□ 0.35
ACTN1-205ENST00000538545 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
ACTN1-205ENST00000538545 COPRSQ9NQ92 184 aa17.23■□□□□ 0.35
ACTN1-205ENST00000538545 GOLGB1Q14789 3259 aaKnown RBP17.23■□□□□ 0.35
ACTN1-205ENST00000538545 MAP3K15Q6ZN16 1313 aa17.23■□□□□ 0.35
ACTN1-205ENST00000538545 LOC102724428A0A0B4J2F2 783 aa17.23■□□□□ 0.35
ACTN1-205ENST00000538545 REC8O95072 547 aa17.23■□□□□ 0.35
ACTN1-205ENST00000538545 SIK1P57059 783 aa17.23■□□□□ 0.35
ACTN1-205ENST00000538545 TIMM10P62072 90 aa17.23■□□□□ 0.35
ACTN1-205ENST00000538545 NOL8Q76FK4 1167 aaKnown RBP17.23■□□□□ 0.35
ACTN1-205ENST00000538545 DBNDD2Q9BQY9 259 aa17.23■□□□□ 0.35
ACTN1-205ENST00000538545 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
ACTN1-205ENST00000538545 LRP6O75581 1613 aa17.22■□□□□ 0.35
ACTN1-205ENST00000538545 DZIP3Q86Y13 1208 aaKnown RBP17.22■□□□□ 0.35
ACTN1-205ENST00000538545 USP21Q9UK80 565 aa17.22■□□□□ 0.35
ACTN1-205ENST00000538545 GLRX3O76003 335 aaKnown RBP17.22■□□□□ 0.35
ACTN1-205ENST00000538545 MYH14Q7Z406 1995 aaKnown RBP17.22■□□□□ 0.35
ACTN1-205ENST00000538545 HSPA1LP34931 641 aa17.21■□□□□ 0.35
ACTN1-205ENST00000538545 CRKLP46109 303 aaKnown RBP17.21■□□□□ 0.35
ACTN1-205ENST00000538545 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
ACTN1-205ENST00000538545 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
ACTN1-205ENST00000538545 TNNI3KQ59H18 835 aa17.21■□□□□ 0.35
ACTN1-205ENST00000538545 INTS5Q6P9B9 1019 aaKnown RBP17.21■□□□□ 0.35
ACTN1-205ENST00000538545 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.35
ACTN1-205ENST00000538545 NEUROD6Q96NK8 337 aa17.21■□□□□ 0.35
ACTN1-205ENST00000538545 FPGT-TNNI3KV9GXZ4 949 aa17.21■□□□□ 0.35
ACTN1-205ENST00000538545 BARGINQ6ZT62 677 aa17.2■□□□□ 0.34
ACTN1-205ENST00000538545 FAM227BQ96M60 508 aa17.2■□□□□ 0.34
ACTN1-205ENST00000538545 CDCA7Q9BWT1 371 aaPredicted RBP17.2■□□□□ 0.34
ACTN1-205ENST00000538545 AOX1Q06278 1338 aa17.2■□□□□ 0.34
ACTN1-205ENST00000538545 JCADQ9P266 1359 aa17.2■□□□□ 0.34
ACTN1-205ENST00000538545 SLFNL1Q499Z3 407 aa17.2■□□□□ 0.34
ACTN1-205ENST00000538545 TTC41PQ6P2S7 1318 aa17.2■□□□□ 0.34
ACTN1-205ENST00000538545 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
ACTN1-205ENST00000538545 UBN2Q6ZU65 1347 aa17.19■□□□□ 0.34
ACTN1-205ENST00000538545 PALLDQ8WX93 1383 aa17.19■□□□□ 0.34
ACTN1-205ENST00000538545 UPF3BQ9BZI7 483 aaKnown RBP17.19■□□□□ 0.34
ACTN1-205ENST00000538545 USP42Q9H9J4 1324 aaKnown RBP17.19■□□□□ 0.34
ACTN1-205ENST00000538545 SNX21Q969T3 373 aa17.18■□□□□ 0.34
ACTN1-205ENST00000538545 DNAJC2Q99543 621 aaKnown RBP17.18■□□□□ 0.34
ACTN1-205ENST00000538545 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
ACTN1-205ENST00000538545 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
ACTN1-205ENST00000538545 TRMT112Q9UI30 125 aaKnown RBP17.18■□□□□ 0.34
ACTN1-205ENST00000538545 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
ACTN1-205ENST00000538545 SGSM2O43147 1006 aa17.17■□□□□ 0.34
ACTN1-205ENST00000538545 DTNBO60941 627 aa17.17■□□□□ 0.34
ACTN1-205ENST00000538545 PTH1RQ03431 593 aa17.17■□□□□ 0.34
ACTN1-205ENST00000538545 VPS72Q15906 364 aa17.17■□□□□ 0.34
ACTN1-205ENST00000538545 MEX3CQ5U5Q3 659 aaKnown RBP17.17■□□□□ 0.34
ACTN1-205ENST00000538545 CERKQ8TCT0 537 aa17.17■□□□□ 0.34
ACTN1-205ENST00000538545 GPATCH3Q96I76 525 aa17.17■□□□□ 0.34
ACTN1-205ENST00000538545 LARP6Q9BRS8 491 aaKnown RBP17.17■□□□□ 0.34
ACTN1-205ENST00000538545 NWD2Q9ULI1 1742 aa17.17■□□□□ 0.34
ACTN1-205ENST00000538545 NUP98P52948 1817 aa17.17■□□□□ 0.34
ACTN1-205ENST00000538545 GREM2Q9H772 168 aa17.17■□□□□ 0.34
ACTN1-205ENST00000538545 DIAPH3Q9NSV4 1193 aa17.17■□□□□ 0.34
ACTN1-205ENST00000538545 NEK4P51957 841 aa17.16■□□□□ 0.34
ACTN1-205ENST00000538545 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
ACTN1-205ENST00000538545 HCLS1P14317 486 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-205ENST00000538545 EIF5P55010 431 aaKnown RBP17.16■□□□□ 0.34
ACTN1-205ENST00000538545 ZBTB38Q8NAP3 1195 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-205ENST00000538545 CPA1P15085 419 aa17.16■□□□□ 0.34
ACTN1-205ENST00000538545 IL6STP40189 918 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-205ENST00000538545 RABEP1Q15276 862 aa17.16■□□□□ 0.34
ACTN1-205ENST00000538545 CCDC57Q2TAC2 916 aa17.16■□□□□ 0.34
ACTN1-205ENST00000538545 DDX46Q7L014 1031 aaKnown RBP17.16■□□□□ 0.34
ACTN1-205ENST00000538545 FNBP4Q8N3X1 1017 aaPredicted RBP17.16■□□□□ 0.34
ACTN1-205ENST00000538545 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
ACTN1-205ENST00000538545 A0A0D9SFI3 127 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms