RNA–Protein interactions for RNA: ENST00000538171.5

TRAP1-202, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2 BASIC

Gene TRAP1, Length 2,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-202ENST00000538171 PRPF40BQ6NWY9 871 aaKnown RBP27.48■■□□□ 1.99
TRAP1-202ENST00000538171 BOLA2Q9H3K6 86 aa27.48■■□□□ 1.99
TRAP1-202ENST00000538171 PCDH11XQ9BZA7 1347 aa27.48■■□□□ 1.99
TRAP1-202ENST00000538171 PCDH11YQ9BZA8 1340 aa27.48■■□□□ 1.99
TRAP1-202ENST00000538171 WDR33Q9C0J8 1336 aaKnown RBP27.48■■□□□ 1.99
TRAP1-202ENST00000538171 RFX5P48382 616 aaPredicted RBP27.47■■□□□ 1.99
TRAP1-202ENST00000538171 NMIQ13287 307 aaPredicted RBP27.47■■□□□ 1.99
TRAP1-202ENST00000538171 UBE3BQ7Z3V4 1068 aa27.47■■□□□ 1.99
TRAP1-202ENST00000538171 PLBD2Q8NHP8 589 aa27.47■■□□□ 1.99
TRAP1-202ENST00000538171 JARID2Q92833 1246 aaPredicted RBP27.47■■□□□ 1.99
TRAP1-202ENST00000538171 FAM227BQ96M60 508 aa27.47■■□□□ 1.99
TRAP1-202ENST00000538171 NECTIN1Q15223 517 aa27.47■■□□□ 1.99
TRAP1-202ENST00000538171 TM6SF1Q9BZW5 370 aa27.47■■□□□ 1.99
TRAP1-202ENST00000538171 NUP188Q5SRE5 1749 aa27.46■■□□□ 1.99
TRAP1-202ENST00000538171 RPAP1Q9BWH6 1393 aaPredicted RBP27.46■■□□□ 1.99
TRAP1-202ENST00000538171 PRDM11Q9NQV5 511 aa27.46■■□□□ 1.99
TRAP1-202ENST00000538171 SNRKQ9NRH2 765 aa27.46■■□□□ 1.99
TRAP1-202ENST00000538171 PAPPAQ13219 1627 aa27.46■■□□□ 1.99
TRAP1-202ENST00000538171 TCHHQ07283 1943 aa27.45■■□□□ 1.99
TRAP1-202ENST00000538171 ATP5J2-PTCD1G3V325 749 aa27.45■■□□□ 1.99
TRAP1-202ENST00000538171 PTCD1O75127 700 aaKnown RBP27.45■■□□□ 1.99
TRAP1-202ENST00000538171 MBD3O95983 291 aa27.45■■□□□ 1.99
TRAP1-202ENST00000538171 NASPP49321 788 aaPredicted RBP27.45■■□□□ 1.99
TRAP1-202ENST00000538171 PTPN12Q05209 780 aaKnown RBP27.45■■□□□ 1.99
TRAP1-202ENST00000538171 JAKMIP1Q96N16 626 aaKnown RBP27.45■■□□□ 1.99
TRAP1-202ENST00000538171 ERBB4Q15303 1308 aa27.45■■□□□ 1.99
TRAP1-202ENST00000538171 ABCA3Q99758 1704 aa27.45■■□□□ 1.98
TRAP1-202ENST00000538171 CPA1P15085 419 aa27.45■■□□□ 1.98
TRAP1-202ENST00000538171 ADCK5Q3MIX3 580 aa27.45■■□□□ 1.98
TRAP1-202ENST00000538171 VPS53Q5VIR6 699 aa27.45■■□□□ 1.98
TRAP1-202ENST00000538171 TOM1L2Q6ZVM7 507 aa27.45■■□□□ 1.98
TRAP1-202ENST00000538171 ZCRB1Q8TBF4 217 aaKnown RBP27.45■■□□□ 1.98
TRAP1-202ENST00000538171 FSD1Q9BTV5 496 aa27.45■■□□□ 1.98
TRAP1-202ENST00000538171 ZSWIM6Q9HCJ5 1215 aa27.45■■□□□ 1.98
TRAP1-202ENST00000538171 RBM27Q9P2N5 1060 aaKnown RBP27.45■■□□□ 1.98
TRAP1-202ENST00000538171 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.45■■□□□ 1.98
TRAP1-202ENST00000538171 COL5A2P05997 1499 aaPredicted RBP27.44■■□□□ 1.98
TRAP1-202ENST00000538171 A0A087WZG4 1122 aa27.44■■□□□ 1.98
TRAP1-202ENST00000538171 RBM8AQ9Y5S9 174 aaKnown RBP27.44■■□□□ 1.98
TRAP1-202ENST00000538171 SHANK3Q9BYB0 1731 aa27.44■■□□□ 1.98
TRAP1-202ENST00000538171 MAP4K1Q92918 833 aa27.44■■□□□ 1.98
TRAP1-202ENST00000538171 LARP6Q9BRS8 491 aaKnown RBP27.44■■□□□ 1.98
TRAP1-202ENST00000538171 NSFL1CQ9UNZ2 370 aaKnown RBP27.44■■□□□ 1.98
TRAP1-202ENST00000538171 PDRG1Q9NUG6 133 aa27.43■■□□□ 1.98
TRAP1-202ENST00000538171 ZKSCAN1P17029 563 aaPredicted RBP27.42■■□□□ 1.98
TRAP1-202ENST00000538171 TMEM63CQ9P1W3 806 aa27.42■■□□□ 1.98
TRAP1-202ENST00000538171 CYP46A1Q9Y6A2 500 aa27.42■■□□□ 1.98
TRAP1-202ENST00000538171 A0A0D9SFI3 127 aa27.42■■□□□ 1.98
TRAP1-202ENST00000538171 CASP7P55210 303 aa27.42■■□□□ 1.98
TRAP1-202ENST00000538171 TNNI3KQ59H18 835 aa27.42■■□□□ 1.98
TRAP1-202ENST00000538171 CREB3L3Q68CJ9 461 aa27.42■■□□□ 1.98
TRAP1-202ENST00000538171 FPGT-TNNI3KV9GXZ4 949 aa27.42■■□□□ 1.98
TRAP1-202ENST00000538171 KCPQ6ZWJ8 1503 aa27.41■■□□□ 1.98
TRAP1-202ENST00000538171 MED23Q9ULK4 1368 aa27.41■■□□□ 1.98
TRAP1-202ENST00000538171 NBPF26B4DH59 902 aa27.41■■□□□ 1.98
TRAP1-202ENST00000538171 ERVV-2B6SEH9 535 aa27.41■■□□□ 1.98
TRAP1-202ENST00000538171 NBPF14Q5TI25 921 aa27.41■■□□□ 1.98
TRAP1-202ENST00000538171 NBPF10Q6P3W6 841 aaKnown RBP27.41■■□□□ 1.98
TRAP1-202ENST00000538171 NBPF15Q8N660 670 aa27.41■■□□□ 1.98
TRAP1-202ENST00000538171 TJP1Q07157 1748 aa27.41■■□□□ 1.98
TRAP1-202ENST00000538171 SOS2Q07890 1332 aaPredicted RBP27.41■■□□□ 1.98
TRAP1-202ENST00000538171 KCNJ4P48050 445 aa27.4■■□□□ 1.98
TRAP1-202ENST00000538171 TFCP2Q12800 502 aa27.4■■□□□ 1.98
TRAP1-202ENST00000538171 DBNLQ9UJU6 430 aaKnown RBP27.4■■□□□ 1.98
TRAP1-202ENST00000538171 LARGE1O95461 756 aa27.39■■□□□ 1.98
TRAP1-202ENST00000538171 ATP5JP18859 108 aa27.39■■□□□ 1.98
TRAP1-202ENST00000538171 CCDC173Q0VFZ6 552 aa27.39■■□□□ 1.98
TRAP1-202ENST00000538171 SMC3Q9UQE7 1217 aa27.39■■□□□ 1.98
TRAP1-202ENST00000538171 TRIM44Q96DX7 344 aaPredicted RBP27.39■■□□□ 1.97
TRAP1-202ENST00000538171 ZSCAN31Q96LW9 406 aaPredicted RBP27.39■■□□□ 1.97
TRAP1-202ENST00000538171 PRIM1P49642 420 aaKnown RBP27.38■■□□□ 1.97
TRAP1-202ENST00000538171 STRCQ7RTU9 1775 aa27.38■■□□□ 1.97
TRAP1-202ENST00000538171 SLC27A2O14975 620 aa27.37■■□□□ 1.97
TRAP1-202ENST00000538171 ANP32BQ92688 251 aaKnown RBP27.37■■□□□ 1.97
TRAP1-202ENST00000538171 SH2B1Q9NRF2 756 aaPredicted RBP27.37■■□□□ 1.97
TRAP1-202ENST00000538171 JCADQ9P266 1359 aa27.37■■□□□ 1.97
TRAP1-202ENST00000538171 ZSCAN22P10073 491 aaPredicted RBP27.37■■□□□ 1.97
TRAP1-202ENST00000538171 NKX1-1Q15270 411 aaPredicted RBP27.37■■□□□ 1.97
TRAP1-202ENST00000538171 FOXD4L6Q3SYB3 417 aaPredicted RBP27.37■■□□□ 1.97
TRAP1-202ENST00000538171 FOXD4L3Q6VB84 417 aaPredicted RBP27.37■■□□□ 1.97
TRAP1-202ENST00000538171 PPP1R9BQ96SB3 815 aa27.37■■□□□ 1.97
TRAP1-202ENST00000538171 STX6O43752 255 aa27.36■■□□□ 1.97
TRAP1-202ENST00000538171 IL2RBP14784 551 aa27.36■■□□□ 1.97
TRAP1-202ENST00000538171 H7C1W4 665 aa27.36■■□□□ 1.97
TRAP1-202ENST00000538171 SYT1P21579 422 aa27.36■■□□□ 1.97
TRAP1-202ENST00000538171 LRSAM1Q6UWE0 723 aa27.36■■□□□ 1.97
TRAP1-202ENST00000538171 LMBR1LQ6UX01 489 aa27.36■■□□□ 1.97
TRAP1-202ENST00000538171 TTLL7Q6ZT98 887 aa27.36■■□□□ 1.97
TRAP1-202ENST00000538171 CCDC83Q8IWF9 413 aa27.36■■□□□ 1.97
TRAP1-202ENST00000538171 EDC3Q96F86 508 aaKnown RBP27.36■■□□□ 1.97
TRAP1-202ENST00000538171 RBSNQ9H1K0 784 aa27.36■■□□□ 1.97
TRAP1-202ENST00000538171 PSMA5P28066 241 aa27.35■■□□□ 1.97
TRAP1-202ENST00000538171 RNF20Q5VTR2 975 aa27.35■■□□□ 1.97
TRAP1-202ENST00000538171 CARD10Q9BWT7 1032 aa27.35■■□□□ 1.97
TRAP1-202ENST00000538171 SYCE3A1L190 88 aa27.34■■□□□ 1.97
TRAP1-202ENST00000538171 FOXO4P98177 505 aa27.34■■□□□ 1.97
TRAP1-202ENST00000538171 SLAIN2Q9P270 581 aa27.34■■□□□ 1.97
TRAP1-202ENST00000538171 RFX7Q2KHR2 1363 aa27.34■■□□□ 1.97
TRAP1-202ENST00000538171 ZNF589Q86UQ0 364 aaPredicted RBP27.34■■□□□ 1.97
TRAP1-202ENST00000538171 DDX54Q8TDD1 881 aaKnown RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms