RNA–Protein interactions for RNA: ENST00000537728.5

ATP6V0A1-204, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2 BASIC

Gene ATP6V0A1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-204ENST00000537728 PRPF40BQ6NWY9 871 aaKnown RBP18.87■□□□□ 0.61
ATP6V0A1-204ENST00000537728 PLBD2Q8NHP8 589 aa18.87■□□□□ 0.61
ATP6V0A1-204ENST00000537728 FSD1Q9BTV5 496 aa18.87■□□□□ 0.61
ATP6V0A1-204ENST00000537728 COPRSQ9NQ92 184 aa18.87■□□□□ 0.61
ATP6V0A1-204ENST00000537728 GLI3P10071 1580 aa18.87■□□□□ 0.61
ATP6V0A1-204ENST00000537728 KCNJ4P48050 445 aa18.87■□□□□ 0.61
ATP6V0A1-204ENST00000537728 NMIQ13287 307 aaPredicted RBP18.87■□□□□ 0.61
ATP6V0A1-204ENST00000537728 LIMCH1Q9UPQ0 1083 aa18.87■□□□□ 0.61
ATP6V0A1-204ENST00000537728 CCDC171Q6TFL3 1326 aa18.86■□□□□ 0.61
ATP6V0A1-204ENST00000537728 FAM227BQ96M60 508 aa18.86■□□□□ 0.61
ATP6V0A1-204ENST00000537728 GPT2Q8TD30 523 aa18.86■□□□□ 0.61
ATP6V0A1-204ENST00000537728 JAKMIP1Q96N16 626 aaKnown RBP18.86■□□□□ 0.61
ATP6V0A1-204ENST00000537728 CPA1P15085 419 aa18.85■□□□□ 0.61
ATP6V0A1-204ENST00000537728 ZSCAN23Q3MJ62 389 aa18.85■□□□□ 0.61
ATP6V0A1-204ENST00000537728 LARP6Q9BRS8 491 aaKnown RBP18.85■□□□□ 0.61
ATP6V0A1-204ENST00000537728 WDR33Q9C0J8 1336 aaKnown RBP18.85■□□□□ 0.61
ATP6V0A1-204ENST00000537728 PTPN12Q05209 780 aaKnown RBP18.85■□□□□ 0.61
ATP6V0A1-204ENST00000537728 COL5A2P05997 1499 aaPredicted RBP18.85■□□□□ 0.61
ATP6V0A1-204ENST00000537728 UBR2Q8IWV8 1755 aa18.85■□□□□ 0.61
ATP6V0A1-204ENST00000537728 ERBB4Q15303 1308 aa18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 ZKSCAN1P17029 563 aaPredicted RBP18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 RFX5P48382 616 aaPredicted RBP18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 ZNF445P59923 1031 aa18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 RABL6Q3YEC7 729 aaPredicted RBP18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 RUFY3Q7L099 469 aa18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 ERVV-2B6SEH9 535 aa18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 SLAIN2Q9P270 581 aa18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 RBM8AQ9Y5S9 174 aaKnown RBP18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 TCHHQ07283 1943 aa18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 COL15A1P39059 1388 aa18.84■□□□□ 0.61
ATP6V0A1-204ENST00000537728 TFCP2Q12800 502 aa18.83■□□□□ 0.61
ATP6V0A1-204ENST00000537728 NECTIN1Q15223 517 aa18.83■□□□□ 0.61
ATP6V0A1-204ENST00000537728 ADCK5Q3MIX3 580 aa18.83■□□□□ 0.61
ATP6V0A1-204ENST00000537728 PDRG1Q9NUG6 133 aa18.83■□□□□ 0.61
ATP6V0A1-204ENST00000537728 CYP46A1Q9Y6A2 500 aa18.83■□□□□ 0.61
ATP6V0A1-204ENST00000537728 SOS2Q07890 1332 aaPredicted RBP18.83■□□□□ 0.6
ATP6V0A1-204ENST00000537728 NBPF26B4DH59 902 aa18.83■□□□□ 0.6
ATP6V0A1-204ENST00000537728 NBPF14Q5TI25 921 aa18.83■□□□□ 0.6
ATP6V0A1-204ENST00000537728 NBPF10Q6P3W6 841 aaKnown RBP18.83■□□□□ 0.6
ATP6V0A1-204ENST00000537728 NBPF15Q8N660 670 aa18.83■□□□□ 0.6
ATP6V0A1-204ENST00000537728 DDX54Q8TDD1 881 aaKnown RBP18.83■□□□□ 0.6
ATP6V0A1-204ENST00000537728 IL2RBP14784 551 aa18.82■□□□□ 0.6
ATP6V0A1-204ENST00000537728 TNNI3KQ59H18 835 aa18.82■□□□□ 0.6
ATP6V0A1-204ENST00000537728 TM6SF1Q9BZW5 370 aa18.82■□□□□ 0.6
ATP6V0A1-204ENST00000537728 RBM27Q9P2N5 1060 aaKnown RBP18.82■□□□□ 0.6
ATP6V0A1-204ENST00000537728 FPGT-TNNI3KV9GXZ4 949 aa18.82■□□□□ 0.6
ATP6V0A1-204ENST00000537728 VPS53Q5VIR6 699 aa18.82■□□□□ 0.6
ATP6V0A1-204ENST00000537728 KCNB2Q92953 911 aa18.82■□□□□ 0.6
ATP6V0A1-204ENST00000537728 STRN4Q9NRL3 753 aa18.82■□□□□ 0.6
ATP6V0A1-204ENST00000537728 CHMP3Q9Y3E7 222 aa18.82■□□□□ 0.6
ATP6V0A1-204ENST00000537728 ABCA3Q99758 1704 aa18.82■□□□□ 0.6
ATP6V0A1-204ENST00000537728 A0A0D9SFI3 127 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 NASPP49321 788 aaPredicted RBP18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 FOXD4L6Q3SYB3 417 aaPredicted RBP18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 FOXD4L3Q6VB84 417 aaPredicted RBP18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 MAP4K1Q92918 833 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 ZSWIM6Q9HCJ5 1215 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 NUP188Q5SRE5 1749 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 STRCQ7RTU9 1775 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 MBD3O95983 291 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 RRAGDQ9NQL2 400 aaPredicted RBP18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 DBNLQ9UJU6 430 aaKnown RBP18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 SMC3Q9UQE7 1217 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 CASP7P55210 303 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 LMBR1LQ6UX01 489 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 TTLL7Q6ZT98 887 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 CARD10Q9BWT7 1032 aa18.81■□□□□ 0.6
ATP6V0A1-204ENST00000537728 RPAP1Q9BWH6 1393 aaPredicted RBP18.8■□□□□ 0.6
ATP6V0A1-204ENST00000537728 A1BGP04217 495 aa18.8■□□□□ 0.6
ATP6V0A1-204ENST00000537728 ATP5JP18859 108 aa18.8■□□□□ 0.6
ATP6V0A1-204ENST00000537728 EVA1CP58658 441 aa18.8■□□□□ 0.6
ATP6V0A1-204ENST00000537728 ANP32BQ92688 251 aaKnown RBP18.8■□□□□ 0.6
ATP6V0A1-204ENST00000537728 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
ATP6V0A1-204ENST00000537728 PAPPAQ13219 1627 aa18.8■□□□□ 0.6
ATP6V0A1-204ENST00000537728 SNRKQ9NRH2 765 aa18.8■□□□□ 0.6
ATP6V0A1-204ENST00000537728 CWC25Q9NXE8 425 aaPredicted RBP18.8■□□□□ 0.6
ATP6V0A1-204ENST00000537728 KCPQ6ZWJ8 1503 aa18.79■□□□□ 0.6
ATP6V0A1-204ENST00000537728 TRIM44Q96DX7 344 aaPredicted RBP18.79■□□□□ 0.6
ATP6V0A1-204ENST00000537728 EDC3Q96F86 508 aaKnown RBP18.79■□□□□ 0.6
ATP6V0A1-204ENST00000537728 ZSCAN31Q96LW9 406 aaPredicted RBP18.79■□□□□ 0.6
ATP6V0A1-204ENST00000537728 NSFL1CQ9UNZ2 370 aaKnown RBP18.79■□□□□ 0.6
ATP6V0A1-204ENST00000537728 LARGE1O95461 756 aa18.79■□□□□ 0.6
ATP6V0A1-204ENST00000537728 NKX1-1Q15270 411 aaPredicted RBP18.79■□□□□ 0.6
ATP6V0A1-204ENST00000537728 RNF20Q5VTR2 975 aa18.79■□□□□ 0.6
ATP6V0A1-204ENST00000537728 H7C1W4 665 aa18.78■□□□□ 0.6
ATP6V0A1-204ENST00000537728 SLC27A2O14975 620 aa18.78■□□□□ 0.6
ATP6V0A1-204ENST00000537728 CCDC83Q8IWF9 413 aa18.78■□□□□ 0.6
ATP6V0A1-204ENST00000537728 TMEM63CQ9P1W3 806 aa18.78■□□□□ 0.6
ATP6V0A1-204ENST00000537728 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
ATP6V0A1-204ENST00000537728 MED23Q9ULK4 1368 aa18.78■□□□□ 0.6
ATP6V0A1-204ENST00000537728 PSMA5P28066 241 aa18.78■□□□□ 0.6
ATP6V0A1-204ENST00000537728 ZBTB3Q9H5J0 574 aa18.78■□□□□ 0.6
ATP6V0A1-204ENST00000537728 SH2B1Q9NRF2 756 aaPredicted RBP18.78■□□□□ 0.6
ATP6V0A1-204ENST00000537728 FOXO4P98177 505 aa18.77■□□□□ 0.6
ATP6V0A1-204ENST00000537728 DBNDD2Q9BQY9 259 aa18.77■□□□□ 0.6
ATP6V0A1-204ENST00000537728 TJP1Q07157 1748 aa18.77■□□□□ 0.6
ATP6V0A1-204ENST00000537728 STX6O43752 255 aa18.77■□□□□ 0.6
ATP6V0A1-204ENST00000537728 DNAJC2Q99543 621 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms