RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 BICDL1Q6ZP65 573 aa19.68■□□□□ 0.74
SFSWAP-206ENST00000537582 UBE3BQ7Z3V4 1068 aa19.68■□□□□ 0.74
SFSWAP-206ENST00000537582 SYNE4Q8N205 404 aa19.68■□□□□ 0.74
SFSWAP-206ENST00000537582 CCDC191Q8NCU4 936 aa19.68■□□□□ 0.74
SFSWAP-206ENST00000537582 NIP7Q9Y221 180 aaKnown RBP eCLIP19.68■□□□□ 0.74
SFSWAP-206ENST00000537582 UTYO14607 1347 aa19.68■□□□□ 0.74
SFSWAP-206ENST00000537582 CASP7P55210 303 aa19.67■□□□□ 0.74
SFSWAP-206ENST00000537582 TRIM28Q13263 835 aaKnown RBP19.67■□□□□ 0.74
SFSWAP-206ENST00000537582 KAZALD1Q96I82 304 aa19.67■□□□□ 0.74
SFSWAP-206ENST00000537582 SUCLG2Q96I99 432 aa19.67■□□□□ 0.74
SFSWAP-206ENST00000537582 MSH5O43196 834 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 IGHDP01880 384 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 GNAI2P04899 355 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 GYS1P13807 737 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 SUSD4Q5VX71 490 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 SIRT2Q8IXJ6 389 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 CCDC136Q96JN2 1154 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 STK32BQ9NY57 414 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 ZNF652Q9Y2D9 606 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 H7C1W4 665 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 CLEC4GQ6UXB4 293 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 PELP1Q8IZL8 1130 aaKnown RBP19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 FAM89AQ96GI7 184 aa19.66■□□□□ 0.74
SFSWAP-206ENST00000537582 IBTKQ9P2D0 1353 aaPredicted RBP19.65■□□□□ 0.74
SFSWAP-206ENST00000537582 EPHA10Q5JZY3 1008 aa19.65■□□□□ 0.74
SFSWAP-206ENST00000537582 CEP85Q6P2H3 762 aa19.65■□□□□ 0.74
SFSWAP-206ENST00000537582 PDGFDQ9GZP0 370 aaPredicted RBP19.65■□□□□ 0.74
SFSWAP-206ENST00000537582 CHMP4BQ9H444 224 aaKnown RBP19.65■□□□□ 0.74
SFSWAP-206ENST00000537582 HMGB2P26583 209 aaKnown RBP19.64■□□□□ 0.73
SFSWAP-206ENST00000537582 AAMPQ13685 434 aa19.64■□□□□ 0.73
SFSWAP-206ENST00000537582 NFIXQ14938 502 aa19.62■□□□□ 0.73
SFSWAP-206ENST00000537582 BICC1Q9H694 974 aaKnown RBP19.62■□□□□ 0.73
SFSWAP-206ENST00000537582 TRMT112Q9UI30 125 aaKnown RBP19.62■□□□□ 0.73
SFSWAP-206ENST00000537582 RGL2O15211 777 aa19.61■□□□□ 0.73
SFSWAP-206ENST00000537582 NTSR2O95665 410 aa19.61■□□□□ 0.73
SFSWAP-206ENST00000537582 PCCAP05165 728 aaPredicted RBP19.61■□□□□ 0.73
SFSWAP-206ENST00000537582 NUTM1Q86Y26 1132 aa19.61■□□□□ 0.73
SFSWAP-206ENST00000537582 ANKRD44Q8N8A2 993 aa19.61■□□□□ 0.73
SFSWAP-206ENST00000537582 ZBTB38Q8NAP3 1195 aaPredicted RBP19.61■□□□□ 0.73
SFSWAP-206ENST00000537582 PNMA6EA0A0J9YXQ4 647 aa19.61■□□□□ 0.73
SFSWAP-206ENST00000537582 PARP10Q53GL7 1025 aa19.61■□□□□ 0.73
SFSWAP-206ENST00000537582 MSL1Q68DK7 614 aa19.61■□□□□ 0.73
SFSWAP-206ENST00000537582 COL24A1Q17RW2 1714 aa19.6■□□□□ 0.73
SFSWAP-206ENST00000537582 SETDB2Q96T68 719 aa19.6■□□□□ 0.73
SFSWAP-206ENST00000537582 UTP14AQ9BVJ6 771 aaKnown RBP19.6■□□□□ 0.73
SFSWAP-206ENST00000537582 KDM2BQ8NHM5 1336 aa19.59■□□□□ 0.73
SFSWAP-206ENST00000537582 FOXO4P98177 505 aa19.59■□□□□ 0.73
SFSWAP-206ENST00000537582 CCDC24Q8N4L8 307 aa19.59■□□□□ 0.73
SFSWAP-206ENST00000537582 FLAD1Q8NFF5 587 aa19.59■□□□□ 0.73
SFSWAP-206ENST00000537582 DDR1Q08345 913 aa19.58■□□□□ 0.73
SFSWAP-206ENST00000537582 ERFEQ4G0M1 354 aa19.58■□□□□ 0.73
SFSWAP-206ENST00000537582 PPP1R42Q7Z4L9 355 aa19.58■□□□□ 0.73
SFSWAP-206ENST00000537582 QSER1Q2KHR3 1735 aa19.58■□□□□ 0.72
SFSWAP-206ENST00000537582 ABCC12Q96J65 1359 aa19.58■□□□□ 0.72
SFSWAP-206ENST00000537582 IRS4O14654 1257 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-206ENST00000537582 HCLS1P14317 486 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-206ENST00000537582 ATP8B2P98198 1209 aa19.57■□□□□ 0.72
SFSWAP-206ENST00000537582 HDAC1Q13547 482 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-206ENST00000537582 RPAP2Q8IXW5 612 aaPredicted RBP19.57■□□□□ 0.72
SFSWAP-206ENST00000537582 SH3TC1Q8TE82 1336 aa19.57■□□□□ 0.72
SFSWAP-206ENST00000537582 TM4SF1P30408 202 aa19.57■□□□□ 0.72
SFSWAP-206ENST00000537582 CDHR2Q9BYE9 1310 aa19.56■□□□□ 0.72
SFSWAP-206ENST00000537582 LMBR1LQ6UX01 489 aa19.56■□□□□ 0.72
SFSWAP-206ENST00000537582 NBPF5PQ86XG9 351 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-206ENST00000537582 CCDC85AQ96PX6 553 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-206ENST00000537582 RWDD1Q9H446 243 aaPredicted RBP19.56■□□□□ 0.72
SFSWAP-206ENST00000537582 CARMIL3Q8ND23 1372 aa19.55■□□□□ 0.72
SFSWAP-206ENST00000537582 SRGAP3O43295 1099 aa19.55■□□□□ 0.72
SFSWAP-206ENST00000537582 RABL6Q3YEC7 729 aaPredicted RBP19.55■□□□□ 0.72
SFSWAP-206ENST00000537582 C3orf67Q6ZVT6 689 aa19.55■□□□□ 0.72
SFSWAP-206ENST00000537582 POLRMTO00411 1230 aaKnown RBP19.54■□□□□ 0.72
SFSWAP-206ENST00000537582 MTX1Q13505 466 aa19.54■□□□□ 0.72
SFSWAP-206ENST00000537582 SKAP1Q86WV1 359 aa19.54■□□□□ 0.72
SFSWAP-206ENST00000537582 DDX60Q8IY21 1712 aaKnown RBP19.54■□□□□ 0.72
SFSWAP-206ENST00000537582 POLA2Q14181 598 aa19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 R3HDM1Q15032 1099 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 KLHDC4Q8TBB5 520 aa19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 SERPINB2P05120 415 aa19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 MMP10P09238 476 aa19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 NLGN1Q8N2Q7 840 aa19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 SSH3Q8TE77 659 aa19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 PLA2G12BQ9BX93 195 aa19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 PA2G4Q9UQ80 394 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 HDAC5Q9UQL6 1122 aa19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 CHMP3Q9Y3E7 222 aa19.53■□□□□ 0.72
SFSWAP-206ENST00000537582 GTF2E1P29083 439 aaPredicted RBP19.52■□□□□ 0.71
SFSWAP-206ENST00000537582 CTSWP56202 376 aa19.52■□□□□ 0.71
SFSWAP-206ENST00000537582 FAM161AQ3B820 660 aa19.52■□□□□ 0.71
SFSWAP-206ENST00000537582 CENPQQ7L2Z9 268 aaPredicted RBP19.52■□□□□ 0.71
SFSWAP-206ENST00000537582 PSDA5PKW4 1024 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-206ENST00000537582 PDE8AO60658 829 aa19.51■□□□□ 0.71
SFSWAP-206ENST00000537582 PRR5LQ6MZQ0 368 aa19.51■□□□□ 0.71
SFSWAP-206ENST00000537582 TPTE2Q6XPS3 522 aa19.51■□□□□ 0.71
SFSWAP-206ENST00000537582 CNBD1Q8NA66 436 aa19.51■□□□□ 0.71
SFSWAP-206ENST00000537582 NYXQ9GZU5 481 aa19.51■□□□□ 0.71
SFSWAP-206ENST00000537582 TNRC6CQ9HCJ0 1690 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-206ENST00000537582 LAMB2P55268 1798 aa19.5■□□□□ 0.71
SFSWAP-206ENST00000537582 CSF1RP07333 972 aa19.5■□□□□ 0.71
SFSWAP-206ENST00000537582 RFX5P48382 616 aaPredicted RBP19.5■□□□□ 0.71
SFSWAP-206ENST00000537582 TTLL11Q8NHH1 800 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms