RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ST3GAL1Q11201 340 aa17.15■□□□□ 0.34
USP44-203ENST00000537435 LARP1Q6PKG0 1096 aaKnown RBP17.15■□□□□ 0.34
USP44-203ENST00000537435 MAP4K1Q92918 833 aa17.15■□□□□ 0.34
USP44-203ENST00000537435 MTMR6Q9Y217 621 aa17.15■□□□□ 0.34
USP44-203ENST00000537435 ME3Q16798 604 aa17.15■□□□□ 0.34
USP44-203ENST00000537435 KLHDC4Q8TBB5 520 aa17.15■□□□□ 0.34
USP44-203ENST00000537435 CAMTA1Q9Y6Y1 1673 aa17.15■□□□□ 0.34
USP44-203ENST00000537435 NPHP4O75161 1426 aaPredicted RBP17.15■□□□□ 0.34
USP44-203ENST00000537435 TCHHQ07283 1943 aa17.15■□□□□ 0.34
USP44-203ENST00000537435 NEURL1BA8MQ27 555 aa17.14■□□□□ 0.33
USP44-203ENST00000537435 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
USP44-203ENST00000537435 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
USP44-203ENST00000537435 FSD1Q9BTV5 496 aa17.14■□□□□ 0.33
USP44-203ENST00000537435 SLC52A2Q9HAB3 445 aa17.14■□□□□ 0.33
USP44-203ENST00000537435 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.33
USP44-203ENST00000537435 ZNF142P52746 1687 aaPredicted RBP17.14■□□□□ 0.33
USP44-203ENST00000537435 A0A0D9SFI3 127 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
USP44-203ENST00000537435 MCM5P33992 734 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 NECAB1Q8N987 351 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 XAGE3Q8WTP9 111 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 LMTK3Q96Q04 1460 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 SLC27A2O14975 620 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 DNM1Q05193 864 aaKnown RBP17.13■□□□□ 0.33
USP44-203ENST00000537435 GCKRQ14397 625 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 MYD88Q99836 296 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 SNRKQ9NRH2 765 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 NPHP3Q7Z494 1330 aa17.13■□□□□ 0.33
USP44-203ENST00000537435 LETM1O95202 739 aaPredicted RBP17.12■□□□□ 0.33
USP44-203ENST00000537435 EPHA10Q5JZY3 1008 aa17.12■□□□□ 0.33
USP44-203ENST00000537435 KDM6AO15550 1401 aaPredicted RBP17.12■□□□□ 0.33
USP44-203ENST00000537435 PSMA5P28066 241 aa17.12■□□□□ 0.33
USP44-203ENST00000537435 COL9A3Q14050 684 aaPredicted RBP17.12■□□□□ 0.33
USP44-203ENST00000537435 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
USP44-203ENST00000537435 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
USP44-203ENST00000537435 ADAMTS7Q9UKP4 1686 aa17.12■□□□□ 0.33
USP44-203ENST00000537435 VPS37CA5D8V6 355 aaPredicted RBP17.11■□□□□ 0.33
USP44-203ENST00000537435 PTMAP06454 111 aaKnown RBP17.11■□□□□ 0.33
USP44-203ENST00000537435 CSPP1Q1MSJ5 1256 aa17.11■□□□□ 0.33
USP44-203ENST00000537435 UVSSAQ2YD98 709 aa17.11■□□□□ 0.33
USP44-203ENST00000537435 METTL22Q9BUU2 404 aaPredicted RBP17.11■□□□□ 0.33
USP44-203ENST00000537435 PHKG2P15735 406 aa17.11■□□□□ 0.33
USP44-203ENST00000537435 TRPM3Q9HCF6 1732 aaPredicted RBP17.1■□□□□ 0.33
USP44-203ENST00000537435 ZNF496Q96IT1 587 aaPredicted RBP17.1■□□□□ 0.33
USP44-203ENST00000537435 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
USP44-203ENST00000537435 TATP17735 454 aaPredicted RBP17.1■□□□□ 0.33
USP44-203ENST00000537435 RNF20Q5VTR2 975 aa17.1■□□□□ 0.33
USP44-203ENST00000537435 PROSER2Q86WR7 435 aaPredicted RBP17.1■□□□□ 0.33
USP44-203ENST00000537435 R3HCC1Q9Y3T6 440 aaKnown RBP17.1■□□□□ 0.33
USP44-203ENST00000537435 MED23Q9ULK4 1368 aa17.1■□□□□ 0.33
USP44-203ENST00000537435 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
USP44-203ENST00000537435 BLOC1S2Q6QNY1 142 aa17.09■□□□□ 0.33
USP44-203ENST00000537435 ZNF589Q86UQ0 364 aaPredicted RBP17.09■□□□□ 0.33
USP44-203ENST00000537435 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
USP44-203ENST00000537435 TCEANC2Q96MN5 208 aa17.09■□□□□ 0.33
USP44-203ENST00000537435 USP25Q9UHP3 1055 aa17.09■□□□□ 0.33
USP44-203ENST00000537435 C1orf167Q5SNV9 1468 aa17.09■□□□□ 0.33
USP44-203ENST00000537435 ANKRD13DQ6ZTN6 518 aa17.09■□□□□ 0.33
USP44-203ENST00000537435 EDC3Q96F86 508 aaKnown RBP17.09■□□□□ 0.33
USP44-203ENST00000537435 TAF6LQ9Y6J9 622 aa17.09■□□□□ 0.33
USP44-203ENST00000537435 RRP9O43818 475 aaKnown RBP17.08■□□□□ 0.33
USP44-203ENST00000537435 PIP4K2AP48426 406 aaPredicted RBP17.08■□□□□ 0.33
USP44-203ENST00000537435 LARP1BQ659C4 914 aaKnown RBP17.08■□□□□ 0.33
USP44-203ENST00000537435 USP16Q9Y5T5 823 aa17.08■□□□□ 0.33
USP44-203ENST00000537435 PRKCSHP14314 528 aaPredicted RBP17.08■□□□□ 0.32
USP44-203ENST00000537435 TERF1P54274 439 aa17.08■□□□□ 0.32
USP44-203ENST00000537435 RGPD5Q99666 1765 aa17.08■□□□□ 0.32
USP44-203ENST00000537435 COPRSQ9NQ92 184 aa17.08■□□□□ 0.32
USP44-203ENST00000537435 C5P01031 1676 aa17.07■□□□□ 0.32
USP44-203ENST00000537435 MRC1P22897 1456 aa17.07■□□□□ 0.32
USP44-203ENST00000537435 RPS6KB1P23443 525 aa17.07■□□□□ 0.32
USP44-203ENST00000537435 ANKRD1Q15327 319 aa17.07■□□□□ 0.32
USP44-203ENST00000537435 GIMAP6Q6P9H5 292 aa17.07■□□□□ 0.32
USP44-203ENST00000537435 LRP10Q7Z4F1 713 aa17.07■□□□□ 0.32
USP44-203ENST00000537435 IFNL2Q8IZJ0 200 aa17.07■□□□□ 0.32
USP44-203ENST00000537435 FUCA2Q9BTY2 467 aa17.07■□□□□ 0.32
USP44-203ENST00000537435 DBNLQ9UJU6 430 aaKnown RBP17.07■□□□□ 0.32
USP44-203ENST00000537435 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.07■□□□□ 0.32
USP44-203ENST00000537435 SNRPA1P09661 255 aaKnown RBP17.06■□□□□ 0.32
USP44-203ENST00000537435 RFX5P48382 616 aaPredicted RBP17.06■□□□□ 0.32
USP44-203ENST00000537435 PTPN12Q05209 780 aaKnown RBP17.06■□□□□ 0.32
USP44-203ENST00000537435 CDC37L1Q7L3B6 337 aa17.06■□□□□ 0.32
USP44-203ENST00000537435 TTC5Q8N0Z6 440 aa17.06■□□□□ 0.32
USP44-203ENST00000537435 MEGF6O75095 1541 aa17.06■□□□□ 0.32
USP44-203ENST00000537435 TAF5LO75529 589 aa17.06■□□□□ 0.32
USP44-203ENST00000537435 TOB2Q14106 344 aaPredicted RBP17.06■□□□□ 0.32
USP44-203ENST00000537435 TNNI3KQ59H18 835 aa17.06■□□□□ 0.32
USP44-203ENST00000537435 HMG20BQ9P0W2 317 aa17.06■□□□□ 0.32
USP44-203ENST00000537435 FPGT-TNNI3KV9GXZ4 949 aa17.06■□□□□ 0.32
USP44-203ENST00000537435 JCADQ9P266 1359 aa17.05■□□□□ 0.32
USP44-203ENST00000537435 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
USP44-203ENST00000537435 ATP5JP18859 108 aa17.05■□□□□ 0.32
USP44-203ENST00000537435 TFCP2Q12800 502 aa17.05■□□□□ 0.32
USP44-203ENST00000537435 FERMT3Q86UX7 667 aa17.05■□□□□ 0.32
USP44-203ENST00000537435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.32
USP44-203ENST00000537435 MST1RQ04912 1400 aa17.05■□□□□ 0.32
USP44-203ENST00000537435 ADCY5O95622 1261 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms