RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 FANCIQ9NVI1 1328 aa4.88□□□□□ -1.63
SEC23A-202ENST00000537403 HIP1O00291 1037 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 TPM3P06753 285 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 TSR1Q2NL82 804 aaKnown RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 CCDC85AQ96PX6 553 aaPredicted RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 IL1RAPL2Q9NP60 686 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 USP31Q70CQ4 1352 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 PLEKHG3A1L390 1219 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 STARD3NLO95772 234 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 TAF7Q15545 349 aaPredicted RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 KRT28Q7Z3Y7 464 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 RPAP2Q8IXW5 612 aaPredicted RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 PDCD7Q8N8D1 485 aaKnown RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 QTRT2Q9H974 415 aaKnown RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 GNL3LQ9NVN8 582 aaKnown RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 UBR3Q6ZT12 1888 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 ATMINO43313 823 aaPredicted RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 MKRN3Q13064 507 aaKnown RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 SART3Q15020 963 aaKnown RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 AMOTQ4VCS5 1084 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 RRP12Q5JTH9 1297 aaKnown RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 TTC39AQ5SRH9 613 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 TMEM57Q8N5G2 664 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 SSH1Q8WYL5 1049 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 CCDC47Q96A33 483 aaKnown RBP4.87□□□□□ -1.63
SEC23A-202ENST00000537403 CEP89Q96ST8 783 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 CHD4Q14839 1912 aa4.87□□□□□ -1.63
SEC23A-202ENST00000537403 PDE4CQ08493 712 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 MPRIPQ6WCQ1 1025 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 DCBLD2Q96PD2 775 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.86□□□□□ -1.63
SEC23A-202ENST00000537403 DLEC1Q9Y238 1755 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 ATP2B1P20020 1258 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 IKQ13123 557 aaPredicted RBP4.86□□□□□ -1.63
SEC23A-202ENST00000537403 BICDL1Q6ZP65 573 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 CCDC73Q6ZRK6 1079 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 NOC3LQ8WTT2 800 aaKnown RBP4.86□□□□□ -1.63
SEC23A-202ENST00000537403 EXOC6BQ9Y2D4 811 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 OVOS2A0A0J9YW53 1432 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 OVOS2Q6IE36 1432 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 TPM1P09493 284 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 XBP1P17861 261 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 FKBP4Q02790 459 aaKnown RBP eCLIP4.86□□□□□ -1.63
SEC23A-202ENST00000537403 AACSQ86V21 672 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 CHD1LQ86WJ1 897 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 NGLY1Q96IV0 654 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 TMOD3Q9NYL9 352 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 ACEP12821 1306 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 SIPA1L3O60292 1781 aaPredicted RBP4.86□□□□□ -1.63
SEC23A-202ENST00000537403 KDM4AO75164 1064 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 FBLN1P23142 703 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 MCM2P49736 904 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 BARGINQ6ZT62 677 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.86□□□□□ -1.63
SEC23A-202ENST00000537403 HOOK1Q9UJC3 728 aaKnown RBP4.86□□□□□ -1.63
SEC23A-202ENST00000537403 USP21Q9UK80 565 aa4.86□□□□□ -1.63
SEC23A-202ENST00000537403 MAP4K4O95819 1239 aaPredicted RBP4.85□□□□□ -1.63
SEC23A-202ENST00000537403 TPM2P07951 284 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 RARSP54136 660 aaKnown RBP4.85□□□□□ -1.63
SEC23A-202ENST00000537403 RABEP1Q15276 862 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 LARP1Q6PKG0 1096 aaKnown RBP4.85□□□□□ -1.63
SEC23A-202ENST00000537403 SDF4Q9BRK5 362 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 IFT57Q9NWB7 429 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 SPATA31A1Q5TZJ5 1347 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 EXOC5O00471 708 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 SLC3A2P08195 630 aaKnown RBP4.85□□□□□ -1.63
SEC23A-202ENST00000537403 PDCP20941 246 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 SASS6Q6UVJ0 657 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 ANKRD20A12PQ8NF67 263 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 UBR2Q8IWV8 1755 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 NRXN2Q9P2S2 1712 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 FAM83GA6ND36 823 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 CHRNA2Q15822 529 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 SP7Q8TDD2 431 aaPredicted RBP4.85□□□□□ -1.63
SEC23A-202ENST00000537403 PCMTD1Q96MG8 357 aaPredicted RBP4.85□□□□□ -1.63
SEC23A-202ENST00000537403 CCDC43Q96MW1 224 aaKnown RBP4.85□□□□□ -1.63
SEC23A-202ENST00000537403 NACAP1Q9BZK3 213 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 CWC22Q9HCG8 908 aaKnown RBP4.85□□□□□ -1.63
SEC23A-202ENST00000537403 BRMS1Q9HCU9 246 aa4.85□□□□□ -1.63
SEC23A-202ENST00000537403 F6X3S4 739 aa4.84□□□□□ -1.63
SEC23A-202ENST00000537403 POTEB2H3BUK9 544 aa4.84□□□□□ -1.63
SEC23A-202ENST00000537403 STK11IPQ8N1F8 1099 aa4.84□□□□□ -1.63
SEC23A-202ENST00000537403 ARID3AQ99856 593 aa4.84□□□□□ -1.63
SEC23A-202ENST00000537403 PLEKHG2Q9H7P9 1386 aa4.84□□□□□ -1.63
SEC23A-202ENST00000537403 IPO7O95373 1038 aaKnown RBP4.84□□□□□ -1.63
SEC23A-202ENST00000537403 IGHMBP2P38935 993 aaKnown RBP4.84□□□□□ -1.63
SEC23A-202ENST00000537403 BACH2Q9BYV9 841 aa4.84□□□□□ -1.63
SEC23A-202ENST00000537403 CYP46A1Q9Y6A2 500 aa4.84□□□□□ -1.63
SEC23A-202ENST00000537403 C4AP0C0L4 1744 aa4.84□□□□□ -1.63
SEC23A-202ENST00000537403 C4BP0C0L5 1744 aa4.84□□□□□ -1.63
SEC23A-202ENST00000537403 MAP3K5Q99683 1374 aa4.84□□□□□ -1.63
SEC23A-202ENST00000537403 ATP2B2Q01814 1243 aa4.84□□□□□ -1.64
SEC23A-202ENST00000537403 NFKBIBQ15653 356 aa4.84□□□□□ -1.64
SEC23A-202ENST00000537403 ALDH1L2Q3SY69 923 aa4.84□□□□□ -1.64
SEC23A-202ENST00000537403 HSP90AB2PQ58FF8 381 aa4.84□□□□□ -1.64
SEC23A-202ENST00000537403 KIF1BPQ96EK5 621 aa4.84□□□□□ -1.64
SEC23A-202ENST00000537403 DBF4Q9UBU7 674 aaPredicted RBP4.84□□□□□ -1.64
SEC23A-202ENST00000537403 ABCF2Q9UG63 623 aa4.84□□□□□ -1.64
SEC23A-202ENST00000537403 TNS2Q63HR2 1409 aa4.84□□□□□ -1.64
SEC23A-202ENST00000537403 TIE1P35590 1138 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms