RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 NUCKS1Q9H1E3 243 aaKnown RBP13.51□□□□□ -0.25
POLR1B-216ENST00000537335 LARP1Q6PKG0 1096 aaKnown RBP13.51□□□□□ -0.25
POLR1B-216ENST00000537335 INTS8Q75QN2 995 aaKnown RBP13.51□□□□□ -0.25
POLR1B-216ENST00000537335 GBP7Q8N8V2 638 aaPredicted RBP13.51□□□□□ -0.25
POLR1B-216ENST00000537335 GAS2L2Q8NHY3 880 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 ZHX3Q9H4I2 956 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
POLR1B-216ENST00000537335 RARSP54136 660 aaKnown RBP13.51□□□□□ -0.25
POLR1B-216ENST00000537335 CHMP4BP1P59074 171 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 DIXDC1Q155Q3 683 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 DDX12PQ92771 950 aa13.51□□□□□ -0.25
POLR1B-216ENST00000537335 SCAPERQ9BY12 1400 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 N4BP3O15049 544 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 AKR1B10O60218 316 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 FGFR1OPO95684 399 aaKnown RBP13.5□□□□□ -0.25
POLR1B-216ENST00000537335 PDE1CQ14123 709 aaPredicted RBP13.5□□□□□ -0.25
POLR1B-216ENST00000537335 KARSQ15046 597 aaKnown RBP13.5□□□□□ -0.25
POLR1B-216ENST00000537335 STAC3Q96MF2 364 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 HOMER2Q9NSB8 354 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 TBC1D2BQ9UPU7 963 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
POLR1B-216ENST00000537335 LRRD1A4D1F6 860 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 SEC62Q99442 399 aaKnown RBP13.5□□□□□ -0.25
POLR1B-216ENST00000537335 CWC25Q9NXE8 425 aaPredicted RBP13.5□□□□□ -0.25
POLR1B-216ENST00000537335 RABGAP1Q9Y3P9 1069 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 PPFIA1Q13136 1202 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 CCDC40Q4G0X9 1142 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 RAB11FIP4Q86YS3 637 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 CCDC77Q9BR77 488 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 CTNNA3Q9UI47 895 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 A0A087WUV0 522 aaPredicted RBP13.5□□□□□ -0.25
POLR1B-216ENST00000537335 KRT86O43790 486 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 SMIM24O75264 130 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 CCDC96Q2M329 555 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
POLR1B-216ENST00000537335 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
POLR1B-216ENST00000537335 PRPF4BQ13523 1007 aaKnown RBP13.49□□□□□ -0.25
POLR1B-216ENST00000537335 CTAGE1Q96RT6 745 aa13.49□□□□□ -0.25
POLR1B-216ENST00000537335 ZSCAN16Q9H4T2 348 aaPredicted RBP13.49□□□□□ -0.25
POLR1B-216ENST00000537335 RABEP2Q9H5N1 569 aa13.49□□□□□ -0.25
POLR1B-216ENST00000537335 TPX2Q9ULW0 747 aaKnown RBP13.49□□□□□ -0.25
POLR1B-216ENST00000537335 CUX2O14529 1486 aa13.49□□□□□ -0.25
POLR1B-216ENST00000537335 ALDH3A1P30838 453 aa13.49□□□□□ -0.25
POLR1B-216ENST00000537335 AIMP1Q12904 312 aaKnown RBP13.49□□□□□ -0.25
POLR1B-216ENST00000537335 IFI16Q16666 785 aaKnown RBP13.49□□□□□ -0.25
POLR1B-216ENST00000537335 CCDC102BQ68D86 513 aa13.49□□□□□ -0.25
POLR1B-216ENST00000537335 LZTFL1Q9NQ48 299 aa13.49□□□□□ -0.25
POLR1B-216ENST00000537335 NOP2P46087 812 aaKnown RBP13.49□□□□□ -0.25
POLR1B-216ENST00000537335 ISM2Q6H9L7 571 aa13.49□□□□□ -0.25
POLR1B-216ENST00000537335 GGT6Q6P531 493 aa13.49□□□□□ -0.25
POLR1B-216ENST00000537335 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.49□□□□□ -0.25
POLR1B-216ENST00000537335 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
POLR1B-216ENST00000537335 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
POLR1B-216ENST00000537335 RNF10Q8N5U6 811 aaKnown RBP13.48□□□□□ -0.25
POLR1B-216ENST00000537335 CTNNBL1Q8WYA6 563 aaPredicted RBP13.48□□□□□ -0.25
POLR1B-216ENST00000537335 UTP14AQ9BVJ6 771 aaKnown RBP13.48□□□□□ -0.25
POLR1B-216ENST00000537335 NKTRP30414 1462 aaKnown RBP13.48□□□□□ -0.25
POLR1B-216ENST00000537335 FRMD3A2A2Y4 597 aa13.48□□□□□ -0.25
POLR1B-216ENST00000537335 VIMP08670 466 aaKnown RBP13.48□□□□□ -0.25
POLR1B-216ENST00000537335 KRT83P78385 493 aa13.48□□□□□ -0.25
POLR1B-216ENST00000537335 SNCBQ16143 134 aa13.48□□□□□ -0.25
POLR1B-216ENST00000537335 CASQ2O14958 399 aaPredicted RBP13.48□□□□□ -0.25
POLR1B-216ENST00000537335 PPFIA3O75145 1194 aa13.48□□□□□ -0.25
POLR1B-216ENST00000537335 MTIF2P46199 727 aaKnown RBP13.48□□□□□ -0.25
POLR1B-216ENST00000537335 BRD3Q15059 726 aa13.48□□□□□ -0.25
POLR1B-216ENST00000537335 GPR161Q8N6U8 529 aaKnown RBP13.48□□□□□ -0.25
POLR1B-216ENST00000537335 SELENOOQ9BVL4 669 aa13.48□□□□□ -0.25
POLR1B-216ENST00000537335 IL1RAPL2Q9NP60 686 aa13.48□□□□□ -0.25
POLR1B-216ENST00000537335 GOLGA6BA6NDN3 693 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 ERCC3P19447 782 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 KANK3Q6NY19 840 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 RIC3Q7Z5B4 369 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 NGDNQ8NEJ9 315 aaKnown RBP13.47□□□□□ -0.25
POLR1B-216ENST00000537335 CCDC110Q8TBZ0 833 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 CAPZA3Q96KX2 299 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 MPHOSPH8Q99549 860 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.47□□□□□ -0.25
POLR1B-216ENST00000537335 RAD50Q92878 1312 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 HPDP32754 393 aaPredicted RBP13.47□□□□□ -0.25
POLR1B-216ENST00000537335 ACTN2P35609 894 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 LOC102724159A0A0B4J2E5 919 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 LMOD1P29536 600 aaPredicted RBP13.47□□□□□ -0.25
POLR1B-216ENST00000537335 HNRNPH2P55795 449 aaKnown RBP13.47□□□□□ -0.25
POLR1B-216ENST00000537335 GUCY1B3Q02153 619 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 PWP2Q15269 919 aaKnown RBP13.47□□□□□ -0.25
POLR1B-216ENST00000537335 TACO1Q9BSH4 297 aaKnown RBP13.47□□□□□ -0.25
POLR1B-216ENST00000537335 HIP1RO75146 1068 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 F13A1P00488 732 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 SPAG1Q07617 926 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 MMS22LQ6ZRQ5 1243 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 IFT81Q8WYA0 676 aa13.47□□□□□ -0.25
POLR1B-216ENST00000537335 N4BP2L2Q92802 583 aaPredicted RBP13.47□□□□□ -0.25
POLR1B-216ENST00000537335 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.25
POLR1B-216ENST00000537335 RASIP1Q5U651 963 aa13.46□□□□□ -0.25
POLR1B-216ENST00000537335 NPHP3Q7Z494 1330 aa13.46□□□□□ -0.25
POLR1B-216ENST00000537335 PPP1R14CQ8TAE6 165 aa13.46□□□□□ -0.25
POLR1B-216ENST00000537335 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
POLR1B-216ENST00000537335 TLDC2A0PJX2 215 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms