RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 SCAND2PQ9GZW5 306 aaPredicted RBP17.16■□□□□ 0.34
CDH20-202ENST00000536675 DDX19AQ9NUU7 478 aaKnown RBP17.16■□□□□ 0.34
CDH20-202ENST00000536675 CGNQ9P2M7 1197 aaKnown RBP17.16■□□□□ 0.34
CDH20-202ENST00000536675 PDCP20941 246 aa17.16■□□□□ 0.34
CDH20-202ENST00000536675 DNAJC25Q9H1X3 360 aa17.16■□□□□ 0.34
CDH20-202ENST00000536675 CLIP2Q9UDT6 1046 aa17.16■□□□□ 0.34
CDH20-202ENST00000536675 DDX41Q9UJV9 622 aaKnown RBP17.16■□□□□ 0.34
CDH20-202ENST00000536675 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
CDH20-202ENST00000536675 NPHP3Q7Z494 1330 aa17.16■□□□□ 0.34
CDH20-202ENST00000536675 ZNF771Q7L3S4 317 aaPredicted RBP17.15■□□□□ 0.34
CDH20-202ENST00000536675 LEO1Q8WVC0 666 aaPredicted RBP17.15■□□□□ 0.34
CDH20-202ENST00000536675 ECHDC1Q9NTX5 307 aa17.15■□□□□ 0.34
CDH20-202ENST00000536675 NR1I2O75469 434 aa17.15■□□□□ 0.34
CDH20-202ENST00000536675 PDIA4P13667 645 aaKnown RBP17.15■□□□□ 0.34
CDH20-202ENST00000536675 ZNF165P49910 485 aa17.15■□□□□ 0.34
CDH20-202ENST00000536675 BEND3Q5T5X7 828 aa17.15■□□□□ 0.34
CDH20-202ENST00000536675 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.34
CDH20-202ENST00000536675 CLASRPQ8N2M8 674 aaKnown RBP17.14■□□□□ 0.34
CDH20-202ENST00000536675 KCNJ4P48050 445 aa17.14■□□□□ 0.33
CDH20-202ENST00000536675 TCEANC2Q96MN5 208 aa17.14■□□□□ 0.33
CDH20-202ENST00000536675 SLC27A2O14975 620 aa17.14■□□□□ 0.33
CDH20-202ENST00000536675 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
CDH20-202ENST00000536675 MAP4K1Q92918 833 aa17.14■□□□□ 0.33
CDH20-202ENST00000536675 PGBD1Q96JS3 809 aa17.14■□□□□ 0.33
CDH20-202ENST00000536675 FAM227BQ96M60 508 aa17.14■□□□□ 0.33
CDH20-202ENST00000536675 BABAM1Q9NWV8 329 aa17.14■□□□□ 0.33
CDH20-202ENST00000536675 GABPB1Q06547 395 aaPredicted RBP17.13■□□□□ 0.33
CDH20-202ENST00000536675 CEP135Q66GS9 1140 aa17.13■□□□□ 0.33
CDH20-202ENST00000536675 ZNF592Q92610 1267 aa17.13■□□□□ 0.33
CDH20-202ENST00000536675 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
CDH20-202ENST00000536675 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
CDH20-202ENST00000536675 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
CDH20-202ENST00000536675 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
CDH20-202ENST00000536675 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
CDH20-202ENST00000536675 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
CDH20-202ENST00000536675 KIF18AQ8NI77 898 aa17.13■□□□□ 0.33
CDH20-202ENST00000536675 DNAAF4Q8WXU2 420 aa17.13■□□□□ 0.33
CDH20-202ENST00000536675 CDC25BP30305 580 aa17.12■□□□□ 0.33
CDH20-202ENST00000536675 PSMA5P28066 241 aa17.12■□□□□ 0.33
CDH20-202ENST00000536675 NMIQ13287 307 aaPredicted RBP17.12■□□□□ 0.33
CDH20-202ENST00000536675 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
CDH20-202ENST00000536675 LRRC8AQ8IWT6 810 aa17.11■□□□□ 0.33
CDH20-202ENST00000536675 BICD2Q8TD16 824 aa17.11■□□□□ 0.33
CDH20-202ENST00000536675 GPATCH3Q96I76 525 aa17.11■□□□□ 0.33
CDH20-202ENST00000536675 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
CDH20-202ENST00000536675 USP27XA6NNY8 438 aa17.11■□□□□ 0.33
CDH20-202ENST00000536675 SLFN14P0C7P3 912 aa17.11■□□□□ 0.33
CDH20-202ENST00000536675 TOB2Q14106 344 aaPredicted RBP17.11■□□□□ 0.33
CDH20-202ENST00000536675 ARID5BQ14865 1188 aa17.11■□□□□ 0.33
CDH20-202ENST00000536675 CHPF2Q9P2E5 772 aa17.11■□□□□ 0.33
CDH20-202ENST00000536675 MLECQ14165 292 aa17.11■□□□□ 0.33
CDH20-202ENST00000536675 BLOC1S2Q6QNY1 142 aa17.11■□□□□ 0.33
CDH20-202ENST00000536675 PA2G4Q9UQ80 394 aaKnown RBP17.11■□□□□ 0.33
CDH20-202ENST00000536675 RPS6KB1P23443 525 aa17.1■□□□□ 0.33
CDH20-202ENST00000536675 STK3Q13188 491 aa17.1■□□□□ 0.33
CDH20-202ENST00000536675 ANKRD1Q15327 319 aa17.1■□□□□ 0.33
CDH20-202ENST00000536675 NWD1Q149M9 1564 aa17.1■□□□□ 0.33
CDH20-202ENST00000536675 MTX1Q13505 466 aa17.09■□□□□ 0.33
CDH20-202ENST00000536675 IQCB1Q15051 598 aa17.09■□□□□ 0.33
CDH20-202ENST00000536675 AACSQ86V21 672 aa17.09■□□□□ 0.33
CDH20-202ENST00000536675 NPHP4O75161 1426 aaPredicted RBP17.09■□□□□ 0.33
CDH20-202ENST00000536675 AGLP35573 1532 aa17.09■□□□□ 0.33
CDH20-202ENST00000536675 RBM6P78332 1123 aaKnown RBP17.09■□□□□ 0.33
CDH20-202ENST00000536675 ANXA1P04083 346 aa17.08■□□□□ 0.33
CDH20-202ENST00000536675 KMT5BQ4FZB7 885 aa17.08■□□□□ 0.33
CDH20-202ENST00000536675 ALDH8A1Q9H2A2 487 aaPredicted RBP17.08■□□□□ 0.33
CDH20-202ENST00000536675 ZNF215Q9UL58 517 aaPredicted RBP17.08■□□□□ 0.33
CDH20-202ENST00000536675 A0A0D9SFI3 127 aa17.08■□□□□ 0.32
CDH20-202ENST00000536675 TAF3Q5VWG9 929 aa17.08■□□□□ 0.32
CDH20-202ENST00000536675 SARM1Q6SZW1 724 aa17.08■□□□□ 0.32
CDH20-202ENST00000536675 C11orf57Q6ZUT1 292 aaPredicted RBP17.08■□□□□ 0.32
CDH20-202ENST00000536675 NYAP1Q6ZVC0 841 aa17.08■□□□□ 0.32
CDH20-202ENST00000536675 SNRKQ9NRH2 765 aa17.08■□□□□ 0.32
CDH20-202ENST00000536675 ADCY9O60503 1353 aa17.08■□□□□ 0.32
CDH20-202ENST00000536675 JAK2O60674 1132 aa17.07■□□□□ 0.32
CDH20-202ENST00000536675 CAVIN2O95810 425 aa17.07■□□□□ 0.32
CDH20-202ENST00000536675 HDGFP51858 240 aaKnown RBP17.07■□□□□ 0.32
CDH20-202ENST00000536675 ZNF397Q8NF99 534 aaPredicted RBP17.07■□□□□ 0.32
CDH20-202ENST00000536675 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDH20-202ENST00000536675 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.07■□□□□ 0.32
CDH20-202ENST00000536675 V9GYY5 206 aaPredicted RBP17.07■□□□□ 0.32
CDH20-202ENST00000536675 RGPD8O14715 1765 aaPredicted RBP17.07■□□□□ 0.32
CDH20-202ENST00000536675 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
CDH20-202ENST00000536675 GOLGA6L19H0YKK7 550 aa17.07■□□□□ 0.32
CDH20-202ENST00000536675 EIF4A1P60842 406 aaKnown RBP17.07■□□□□ 0.32
CDH20-202ENST00000536675 RESTQ13127 1097 aa17.07■□□□□ 0.32
CDH20-202ENST00000536675 PTPN14Q15678 1187 aa17.07■□□□□ 0.32
CDH20-202ENST00000536675 HIP1O00291 1037 aa17.07■□□□□ 0.32
CDH20-202ENST00000536675 GIGYF1O75420 1035 aaPredicted RBP17.07■□□□□ 0.32
CDH20-202ENST00000536675 RNF20Q5VTR2 975 aa17.07■□□□□ 0.32
CDH20-202ENST00000536675 ERC1Q8IUD2 1116 aa17.07■□□□□ 0.32
CDH20-202ENST00000536675 MRFAP1L1Q96HT8 127 aa17.07■□□□□ 0.32
CDH20-202ENST00000536675 PTPRUQ92729 1446 aa17.06■□□□□ 0.32
CDH20-202ENST00000536675 NEMFO60524 1076 aa17.06■□□□□ 0.32
CDH20-202ENST00000536675 SKILP12757 684 aa17.06■□□□□ 0.32
CDH20-202ENST00000536675 HOXC9P31274 260 aa17.06■□□□□ 0.32
CDH20-202ENST00000536675 DDX11Q96FC9 970 aa17.06■□□□□ 0.32
CDH20-202ENST00000536675 LTV1Q96GA3 475 aaPredicted RBP17.06■□□□□ 0.32
CDH20-202ENST00000536675 MYH15Q9Y2K3 1946 aa17.06■□□□□ 0.32
CDH20-202ENST00000536675 TERF2Q15554 542 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms