RNA–Protein interactions for RNA: ENST00000536586.5

CD9-206, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 739 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-206ENST00000536586 SLFN5Q08AF3 891 aa17.69■□□□□ 0.42
CD9-206ENST00000536586 STYK1Q6J9G0 422 aa17.69■□□□□ 0.42
CD9-206ENST00000536586 C7orf43Q8WVR3 580 aa17.69■□□□□ 0.42
CD9-206ENST00000536586 MYH16Q9H6N6 1097 aa17.69■□□□□ 0.42
CD9-206ENST00000536586 BCS1LQ9Y276 419 aa17.69■□□□□ 0.42
CD9-206ENST00000536586 ERFEQ4G0M1 354 aa17.68■□□□□ 0.42
CD9-206ENST00000536586 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
CD9-206ENST00000536586 TTLL6Q8N841 843 aa17.68■□□□□ 0.42
CD9-206ENST00000536586 SNED1Q8TER0 1413 aa17.68■□□□□ 0.42
CD9-206ENST00000536586 YY1P25490 414 aa17.67■□□□□ 0.42
CD9-206ENST00000536586 HOXA10P31260 410 aaPredicted RBP17.67■□□□□ 0.42
CD9-206ENST00000536586 G2E3Q7L622 706 aa17.67■□□□□ 0.42
CD9-206ENST00000536586 PPP1R42Q7Z4L9 355 aa17.67■□□□□ 0.42
CD9-206ENST00000536586 NUTM1Q86Y26 1132 aa17.67■□□□□ 0.42
CD9-206ENST00000536586 MASTLQ96GX5 879 aa17.67■□□□□ 0.42
CD9-206ENST00000536586 WWC3Q9ULE0 1092 aa17.67■□□□□ 0.42
CD9-206ENST00000536586 E9PSI1 815 aa17.66■□□□□ 0.42
CD9-206ENST00000536586 NPR1P16066 1061 aa17.65■□□□□ 0.42
CD9-206ENST00000536586 KSR2Q6VAB6 950 aa17.65■□□□□ 0.42
CD9-206ENST00000536586 METTL22Q9BUU2 404 aaPredicted RBP17.65■□□□□ 0.42
CD9-206ENST00000536586 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
CD9-206ENST00000536586 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
CD9-206ENST00000536586 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
CD9-206ENST00000536586 C3orf67Q6ZVT6 689 aa17.64■□□□□ 0.41
CD9-206ENST00000536586 CNKSR1Q969H4 720 aa17.64■□□□□ 0.41
CD9-206ENST00000536586 CDCA7LQ96GN5 454 aa17.64■□□□□ 0.41
CD9-206ENST00000536586 PRELPP51888 382 aa17.63■□□□□ 0.41
CD9-206ENST00000536586 SYNE4Q8N205 404 aa17.63■□□□□ 0.41
CD9-206ENST00000536586 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
CD9-206ENST00000536586 LRRC37AA6NMS7 1700 aa17.63■□□□□ 0.41
CD9-206ENST00000536586 PI4KAP2A4QPH2 592 aa17.62■□□□□ 0.41
CD9-206ENST00000536586 IGKV5-2P06315 115 aa17.62■□□□□ 0.41
CD9-206ENST00000536586 RIC3Q7Z5B4 369 aa17.62■□□□□ 0.41
CD9-206ENST00000536586 PI4KAP1Q8N8J0 262 aa17.62■□□□□ 0.41
CD9-206ENST00000536586 CCDC191Q8NCU4 936 aa17.62■□□□□ 0.41
CD9-206ENST00000536586 ATP5J2-PTCD1G3V325 749 aa17.61■□□□□ 0.41
CD9-206ENST00000536586 NFKBIEO00221 500 aa17.61■□□□□ 0.41
CD9-206ENST00000536586 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
CD9-206ENST00000536586 DDX58O95786 925 aaKnown RBP17.61■□□□□ 0.41
CD9-206ENST00000536586 FLIIQ13045 1269 aa17.61■□□□□ 0.41
CD9-206ENST00000536586 PRPF40BQ6NWY9 871 aaKnown RBP17.61■□□□□ 0.41
CD9-206ENST00000536586 ZNF622Q969S3 477 aaKnown RBP eCLIP17.61■□□□□ 0.41
CD9-206ENST00000536586 CRAMP1Q96RY5 1269 aa17.61■□□□□ 0.41
CD9-206ENST00000536586 SH3TC1Q8TE82 1336 aa17.61■□□□□ 0.41
CD9-206ENST00000536586 LTBP3Q9NS15 1303 aa17.61■□□□□ 0.41
CD9-206ENST00000536586 COL4A1P02462 1669 aa17.61■□□□□ 0.41
CD9-206ENST00000536586 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
CD9-206ENST00000536586 ARHGAP27Q6ZUM4 889 aa17.6■□□□□ 0.41
CD9-206ENST00000536586 ZNF784Q8NCA9 323 aaPredicted RBP17.6■□□□□ 0.41
CD9-206ENST00000536586 ZNF428Q96B54 188 aa17.6■□□□□ 0.41
CD9-206ENST00000536586 TRMT112Q9UI30 125 aaKnown RBP17.6■□□□□ 0.41
CD9-206ENST00000536586 MAP3K2Q9Y2U5 619 aa17.6■□□□□ 0.41
CD9-206ENST00000536586 NPHP1O15259 732 aa17.59■□□□□ 0.41
CD9-206ENST00000536586 GTF2E1P29083 439 aaPredicted RBP17.59■□□□□ 0.41
CD9-206ENST00000536586 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
CD9-206ENST00000536586 SF3B3Q15393 1217 aaKnown RBP17.59■□□□□ 0.41
CD9-206ENST00000536586 ZBTB38Q8NAP3 1195 aaPredicted RBP17.59■□□□□ 0.41
CD9-206ENST00000536586 NLRP3Q96P20 1036 aa17.59■□□□□ 0.41
CD9-206ENST00000536586 LTBP1Q14766 1721 aa17.58■□□□□ 0.41
CD9-206ENST00000536586 PCCAP05165 728 aaPredicted RBP17.58■□□□□ 0.4
CD9-206ENST00000536586 MYD88Q99836 296 aa17.58■□□□□ 0.4
CD9-206ENST00000536586 C21orf2O43822 256 aa17.57■□□□□ 0.4
CD9-206ENST00000536586 FAM89AQ96GI7 184 aa17.57■□□□□ 0.4
CD9-206ENST00000536586 CDHR2Q9BYE9 1310 aa17.56■□□□□ 0.4
CD9-206ENST00000536586 NEURL1BA8MQ27 555 aa17.56■□□□□ 0.4
CD9-206ENST00000536586 CT47B1P0C2W7 299 aaPredicted RBP17.56■□□□□ 0.4
CD9-206ENST00000536586 HCLS1P14317 486 aaPredicted RBP17.56■□□□□ 0.4
CD9-206ENST00000536586 BRPF1P55201 1214 aaPredicted RBP17.56■□□□□ 0.4
CD9-206ENST00000536586 MRPL50Q8N5N7 158 aaKnown RBP17.56■□□□□ 0.4
CD9-206ENST00000536586 H7C1W4 665 aa17.55■□□□□ 0.4
CD9-206ENST00000536586 CASP7P55210 303 aa17.55■□□□□ 0.4
CD9-206ENST00000536586 SOGA3Q5TF21 947 aa17.55■□□□□ 0.4
CD9-206ENST00000536586 DNAAF4Q8WXU2 420 aa17.55■□□□□ 0.4
CD9-206ENST00000536586 CWC25Q9NXE8 425 aaPredicted RBP17.55■□□□□ 0.4
CD9-206ENST00000536586 ZC3H4Q9UPT8 1303 aaKnown RBP17.54■□□□□ 0.4
CD9-206ENST00000536586 RASSF7Q02833 373 aa17.54■□□□□ 0.4
CD9-206ENST00000536586 ALDH1L2Q3SY69 923 aa17.54■□□□□ 0.4
CD9-206ENST00000536586 C9orf131Q5VYM1 1079 aa17.54■□□□□ 0.4
CD9-206ENST00000536586 LINS1Q8NG48 757 aa17.54■□□□□ 0.4
CD9-206ENST00000536586 ABCC4O15439 1325 aa17.53■□□□□ 0.4
CD9-206ENST00000536586 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
CD9-206ENST00000536586 LMNB1P20700 586 aa17.53■□□□□ 0.4
CD9-206ENST00000536586 FKBP5Q13451 457 aaPredicted RBP17.53■□□□□ 0.4
CD9-206ENST00000536586 CWF19L2Q2TBE0 894 aaKnown RBP17.53■□□□□ 0.4
CD9-206ENST00000536586 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
CD9-206ENST00000536586 CC2D2BQ6DHV5 1058 aa17.53■□□□□ 0.4
CD9-206ENST00000536586 OLFM4Q6UX06 510 aa17.53■□□□□ 0.4
CD9-206ENST00000536586 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
CD9-206ENST00000536586 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
CD9-206ENST00000536586 RBM17Q96I25 401 aaKnown RBP17.53■□□□□ 0.4
CD9-206ENST00000536586 SPEF2Q9C093 1822 aa17.53■□□□□ 0.4
CD9-206ENST00000536586 GCKRQ14397 625 aa17.52■□□□□ 0.4
CD9-206ENST00000536586 CCDC93Q567U6 631 aa17.52■□□□□ 0.4
CD9-206ENST00000536586 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.4
CD9-206ENST00000536586 BBOX1O75936 387 aa17.51■□□□□ 0.39
CD9-206ENST00000536586 GRIPAP1Q4V328 841 aa17.51■□□□□ 0.39
CD9-206ENST00000536586 SLC51AQ86UW1 340 aa17.51■□□□□ 0.39
CD9-206ENST00000536586 RTKN2Q8IZC4 609 aa17.51■□□□□ 0.39
CD9-206ENST00000536586 PSMD1Q99460 953 aa17.51■□□□□ 0.39
CD9-206ENST00000536586 DUOX1Q9NRD9 1551 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms