RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 MBD3O95983 291 aa9.49□□□□□ -0.89
CPSF7-216ENST00000536548 INTS3Q68E01 1043 aaKnown RBP9.49□□□□□ -0.89
CPSF7-216ENST00000536548 USHBP1Q8N6Y0 703 aa9.49□□□□□ -0.89
CPSF7-216ENST00000536548 PDLIM2Q96JY6 352 aa9.49□□□□□ -0.89
CPSF7-216ENST00000536548 TERF2IPQ9NYB0 399 aa9.49□□□□□ -0.89
CPSF7-216ENST00000536548 KDM6AO15550 1401 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-216ENST00000536548 LOC102724428A0A0B4J2F2 783 aa9.48□□□□□ -0.89
CPSF7-216ENST00000536548 DYNC1I1O14576 645 aa9.48□□□□□ -0.89
CPSF7-216ENST00000536548 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-216ENST00000536548 CYP2E1P05181 493 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-216ENST00000536548 FBLN1P23142 703 aa9.48□□□□□ -0.89
CPSF7-216ENST00000536548 HMGB2P26583 209 aaKnown RBP9.48□□□□□ -0.89
CPSF7-216ENST00000536548 SIK1P57059 783 aa9.48□□□□□ -0.89
CPSF7-216ENST00000536548 ZSCAN23Q3MJ62 389 aa9.48□□□□□ -0.89
CPSF7-216ENST00000536548 CHADLQ6NUI6 762 aa9.48□□□□□ -0.89
CPSF7-216ENST00000536548 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
CPSF7-216ENST00000536548 PARP3Q9Y6F1 533 aa9.48□□□□□ -0.89
CPSF7-216ENST00000536548 ANKRD26Q9UPS8 1709 aa9.48□□□□□ -0.89
CPSF7-216ENST00000536548 GYS1P13807 737 aa9.47□□□□□ -0.89
CPSF7-216ENST00000536548 NCLP19338 710 aaKnown RBP9.47□□□□□ -0.89
CPSF7-216ENST00000536548 LMNB1P20700 586 aa9.47□□□□□ -0.89
CPSF7-216ENST00000536548 GNAI1P63096 354 aa9.47□□□□□ -0.89
CPSF7-216ENST00000536548 LMOD3Q0VAK6 560 aa9.47□□□□□ -0.89
CPSF7-216ENST00000536548 TRAPPC3LQ5T215 181 aa9.47□□□□□ -0.89
CPSF7-216ENST00000536548 MCTP1Q6DN14 999 aa9.47□□□□□ -0.89
CPSF7-216ENST00000536548 MRPL50Q8N5N7 158 aaKnown RBP9.47□□□□□ -0.89
CPSF7-216ENST00000536548 PIGBQ92521 554 aa9.47□□□□□ -0.89
CPSF7-216ENST00000536548 SMARCC1Q92922 1105 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-216ENST00000536548 SYAP1Q96A49 352 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-216ENST00000536548 ZKSCAN5Q9Y2L8 839 aa9.47□□□□□ -0.89
CPSF7-216ENST00000536548 ABCC4O15439 1325 aa9.47□□□□□ -0.89
CPSF7-216ENST00000536548 ZC3H4Q9UPT8 1303 aaKnown RBP9.47□□□□□ -0.89
CPSF7-216ENST00000536548 ATP6V1AP38606 617 aa9.46□□□□□ -0.9
CPSF7-216ENST00000536548 MCM2P49736 904 aa9.46□□□□□ -0.9
CPSF7-216ENST00000536548 NBPF6Q5VWK0 638 aa9.46□□□□□ -0.9
CPSF7-216ENST00000536548 CAVIN1Q6NZI2 390 aaKnown RBP9.46□□□□□ -0.9
CPSF7-216ENST00000536548 SASS6Q6UVJ0 657 aa9.46□□□□□ -0.9
CPSF7-216ENST00000536548 LRSAM1Q6UWE0 723 aa9.46□□□□□ -0.9
CPSF7-216ENST00000536548 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.9
CPSF7-216ENST00000536548 NBPF4Q96M43 638 aa9.46□□□□□ -0.9
CPSF7-216ENST00000536548 FOXD4L1Q9NU39 408 aa9.46□□□□□ -0.9
CPSF7-216ENST00000536548 LMBRD1Q9NUN5 540 aa9.46□□□□□ -0.9
CPSF7-216ENST00000536548 TSKSQ9UJT2 592 aa9.46□□□□□ -0.9
CPSF7-216ENST00000536548 R3HCC1Q9Y3T6 440 aaKnown RBP9.46□□□□□ -0.9
CPSF7-216ENST00000536548 CYP27B1O15528 508 aa9.45□□□□□ -0.9
CPSF7-216ENST00000536548 REC8O95072 547 aa9.45□□□□□ -0.9
CPSF7-216ENST00000536548 TTC22Q5TAA0 569 aa9.45□□□□□ -0.9
CPSF7-216ENST00000536548 HDGFL2Q7Z4V5 671 aaPredicted RBP9.45□□□□□ -0.9
CPSF7-216ENST00000536548 SMAP1Q8IYB5 467 aaPredicted RBP9.45□□□□□ -0.9
CPSF7-216ENST00000536548 IFT57Q9NWB7 429 aa9.45□□□□□ -0.9
CPSF7-216ENST00000536548 ASAP1Q9ULH1 1129 aa9.45□□□□□ -0.9
CPSF7-216ENST00000536548 PASKQ96RG2 1323 aa9.45□□□□□ -0.9
CPSF7-216ENST00000536548 A0A1W2PP64 1363 aa9.45□□□□□ -0.9
CPSF7-216ENST00000536548 MKI67P46013 3256 aaKnown RBP9.44□□□□□ -0.9
CPSF7-216ENST00000536548 SZT2Q5T011 3432 aa9.44□□□□□ -0.9
CPSF7-216ENST00000536548 UQCRHLA0A096LP55 91 aa9.44□□□□□ -0.9
CPSF7-216ENST00000536548 TMEM88BA6NKF7 163 aa9.44□□□□□ -0.9
CPSF7-216ENST00000536548 CD2BP2O95400 341 aaKnown RBP9.44□□□□□ -0.9
CPSF7-216ENST00000536548 UQCRHP07919 91 aa9.44□□□□□ -0.9
CPSF7-216ENST00000536548 HOXC9P31274 260 aa9.44□□□□□ -0.9
CPSF7-216ENST00000536548 NFE2L2Q16236 605 aa9.44□□□□□ -0.9
CPSF7-216ENST00000536548 RBSNQ9H1K0 784 aa9.44□□□□□ -0.9
CPSF7-216ENST00000536548 RTCBQ9Y3I0 505 aaKnown RBP9.44□□□□□ -0.9
CPSF7-216ENST00000536548 CASP8AP2Q9UKL3 1982 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 CD163L1Q9NR16 1453 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 MAP3K19Q56UN5 1328 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 PCDH11XQ9BZA7 1347 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 PCDH11YQ9BZA8 1340 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 WDR33Q9C0J8 1336 aaKnown RBP9.43□□□□□ -0.9
CPSF7-216ENST00000536548 VAMP4O75379 141 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 DDR1Q08345 913 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 DPY19L2Q6NUT2 758 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 RBM42Q9BTD8 480 aaKnown RBP9.43□□□□□ -0.9
CPSF7-216ENST00000536548 USP26Q9BXU7 913 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 MCOLN1Q9GZU1 580 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 DCTPP1Q9H773 170 aa9.43□□□□□ -0.9
CPSF7-216ENST00000536548 NFKBIEO00221 500 aa9.42□□□□□ -0.9
CPSF7-216ENST00000536548 PRPF40AO75400 957 aaKnown RBP9.42□□□□□ -0.9
CPSF7-216ENST00000536548 ITGBL1O95965 494 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-216ENST00000536548 MCCP23508 829 aa9.42□□□□□ -0.9
CPSF7-216ENST00000536548 RFC4P35249 363 aa9.42□□□□□ -0.9
CPSF7-216ENST00000536548 HMGN5P82970 282 aaKnown RBP9.42□□□□□ -0.9
CPSF7-216ENST00000536548 MAP2K1Q02750 393 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-216ENST00000536548 KIAA2012Q0VF49 1180 aa9.42□□□□□ -0.9
CPSF7-216ENST00000536548 UVSSAQ2YD98 709 aa9.42□□□□□ -0.9
CPSF7-216ENST00000536548 DEFB115Q30KQ5 88 aa9.42□□□□□ -0.9
CPSF7-216ENST00000536548 PLEKHM2Q8IWE5 1019 aa9.42□□□□□ -0.9
CPSF7-216ENST00000536548 RPAP2Q8IXW5 612 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-216ENST00000536548 FAM184AQ8NB25 1140 aa9.42□□□□□ -0.9
CPSF7-216ENST00000536548 GGNBP2Q9H3C7 697 aa9.42□□□□□ -0.9
CPSF7-216ENST00000536548 FAM13BQ9NYF5 915 aa9.42□□□□□ -0.9
CPSF7-216ENST00000536548 A0A0C4DFX4 3053 aa9.41□□□□□ -0.9
CPSF7-216ENST00000536548 RASSF10A6NK89 507 aa9.41□□□□□ -0.9
CPSF7-216ENST00000536548 DDNO94850 711 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-216ENST00000536548 PTMAP06454 111 aaKnown RBP9.41□□□□□ -0.9
CPSF7-216ENST00000536548 GSPT1P15170 499 aaKnown RBP9.41□□□□□ -0.9
CPSF7-216ENST00000536548 TATP17735 454 aaPredicted RBP9.41□□□□□ -0.9
CPSF7-216ENST00000536548 AMPHP49418 695 aa9.41□□□□□ -0.9
CPSF7-216ENST00000536548 PRIMPOLQ96LW4 560 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms