RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 GJD4Q96KN9 370 aaPredicted RBP23.07■■□□□ 1.28
CLPB-205ENST00000535477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.07■■□□□ 1.28
CLPB-205ENST00000535477 GPTP24298 496 aa23.06■■□□□ 1.28
CLPB-205ENST00000535477 IL6STP40189 918 aaPredicted RBP23.06■■□□□ 1.28
CLPB-205ENST00000535477 GIGYF2Q6Y7W6 1299 aaKnown RBP23.06■■□□□ 1.28
CLPB-205ENST00000535477 COL15A1P39059 1388 aa23.06■■□□□ 1.28
CLPB-205ENST00000535477 CRKLP46109 303 aaKnown RBP23.06■■□□□ 1.28
CLPB-205ENST00000535477 INTS5Q6P9B9 1019 aaKnown RBP23.06■■□□□ 1.28
CLPB-205ENST00000535477 DZIP3Q86Y13 1208 aaKnown RBP23.06■■□□□ 1.28
CLPB-205ENST00000535477 SMARCC1Q92922 1105 aaPredicted RBP23.06■■□□□ 1.28
CLPB-205ENST00000535477 CCDC87Q9NVE4 849 aa23.06■■□□□ 1.28
CLPB-205ENST00000535477 IFIT2P09913 472 aaKnown RBP23.05■■□□□ 1.28
CLPB-205ENST00000535477 RFX5P48382 616 aaPredicted RBP23.05■■□□□ 1.28
CLPB-205ENST00000535477 PTPN12Q05209 780 aaKnown RBP23.05■■□□□ 1.28
CLPB-205ENST00000535477 PTF1AQ7RTS3 328 aa23.05■■□□□ 1.28
CLPB-205ENST00000535477 MAP4K4O95819 1239 aaPredicted RBP23.04■■□□□ 1.28
CLPB-205ENST00000535477 AACSQ86V21 672 aa23.04■■□□□ 1.28
CLPB-205ENST00000535477 AOX1Q06278 1338 aa23.04■■□□□ 1.28
CLPB-205ENST00000535477 PI4K2BQ8TCG2 481 aa23.04■■□□□ 1.28
CLPB-205ENST00000535477 FAM89AQ96GI7 184 aa23.04■■□□□ 1.28
CLPB-205ENST00000535477 COPRSQ9NQ92 184 aa23.04■■□□□ 1.28
CLPB-205ENST00000535477 TRIM28Q13263 835 aaKnown RBP23.03■■□□□ 1.28
CLPB-205ENST00000535477 KCNQ4P56696 695 aa23.02■■□□□ 1.28
CLPB-205ENST00000535477 RBM25P49756 843 aaKnown RBP23.01■■□□□ 1.27
CLPB-205ENST00000535477 EIF5P55010 431 aaKnown RBP23.01■■□□□ 1.27
CLPB-205ENST00000535477 HSP90AB3PQ58FF7 597 aa23.01■■□□□ 1.27
CLPB-205ENST00000535477 EAF2Q96CJ1 260 aaPredicted RBP23.01■■□□□ 1.27
CLPB-205ENST00000535477 CCDC8Q9H0W5 538 aaPredicted RBP23.01■■□□□ 1.27
CLPB-205ENST00000535477 NLRP10Q86W26 655 aa23■■□□□ 1.27
CLPB-205ENST00000535477 SYNE4Q8N205 404 aa23■■□□□ 1.27
CLPB-205ENST00000535477 PCCAP05165 728 aaPredicted RBP22.99■■□□□ 1.27
CLPB-205ENST00000535477 ZBTB38Q8NAP3 1195 aaPredicted RBP22.99■■□□□ 1.27
CLPB-205ENST00000535477 TRPC5Q9UL62 973 aaPredicted RBP22.99■■□□□ 1.27
CLPB-205ENST00000535477 TTC41PQ6P2S7 1318 aa22.99■■□□□ 1.27
CLPB-205ENST00000535477 ERVV-1B6SEH8 477 aa22.99■■□□□ 1.27
CLPB-205ENST00000535477 ECHDC1Q9NTX5 307 aa22.99■■□□□ 1.27
CLPB-205ENST00000535477 TFCP2Q12800 502 aa22.98■■□□□ 1.27
CLPB-205ENST00000535477 BECN1Q14457 450 aa22.98■■□□□ 1.27
CLPB-205ENST00000535477 GPATCH3Q96I76 525 aa22.98■■□□□ 1.27
CLPB-205ENST00000535477 CCDC85AQ96PX6 553 aaPredicted RBP22.98■■□□□ 1.27
CLPB-205ENST00000535477 TLR7Q9NYK1 1049 aaKnown RBP22.98■■□□□ 1.27
CLPB-205ENST00000535477 THSD7AQ9UPZ6 1657 aa22.98■■□□□ 1.27
CLPB-205ENST00000535477 EIF5BO60841 1220 aaKnown RBP22.98■■□□□ 1.27
CLPB-205ENST00000535477 ZNF594Q96JF6 807 aaPredicted RBP22.98■■□□□ 1.27
CLPB-205ENST00000535477 USP42Q9H9J4 1324 aaKnown RBP22.97■■□□□ 1.27
CLPB-205ENST00000535477 ERC2O15083 957 aa22.97■■□□□ 1.27
CLPB-205ENST00000535477 GLRX3O76003 335 aaKnown RBP22.97■■□□□ 1.27
CLPB-205ENST00000535477 CHMLP26374 656 aa22.96■■□□□ 1.27
CLPB-205ENST00000535477 SEPT12Q8IYM1 358 aa22.96■■□□□ 1.27
CLPB-205ENST00000535477 QTRT2Q9H974 415 aaKnown RBP22.96■■□□□ 1.27
CLPB-205ENST00000535477 TRMT112Q9UI30 125 aaKnown RBP22.96■■□□□ 1.27
CLPB-205ENST00000535477 TUBGCP6Q96RT7 1819 aa22.96■■□□□ 1.27
CLPB-205ENST00000535477 LINC00116Q8NCU8 138 aa22.96■■□□□ 1.27
CLPB-205ENST00000535477 USP26Q9BXU7 913 aa22.96■■□□□ 1.27
CLPB-205ENST00000535477 CNTROBQ8N137 903 aa22.95■■□□□ 1.26
CLPB-205ENST00000535477 TBC1D2Q9BYX2 928 aa22.94■■□□□ 1.26
CLPB-205ENST00000535477 ATRNO75882 1429 aa22.94■■□□□ 1.26
CLPB-205ENST00000535477 UBN2Q6ZU65 1347 aa22.94■■□□□ 1.26
CLPB-205ENST00000535477 REC8O95072 547 aa22.94■■□□□ 1.26
CLPB-205ENST00000535477 CCDC57Q2TAC2 916 aa22.94■■□□□ 1.26
CLPB-205ENST00000535477 ZNF34Q8IZ26 560 aa22.94■■□□□ 1.26
CLPB-205ENST00000535477 FAM177BA6PVY3 158 aa22.93■■□□□ 1.26
CLPB-205ENST00000535477 TNNI3KQ59H18 835 aa22.93■■□□□ 1.26
CLPB-205ENST00000535477 ESYT1Q9BSJ8 1104 aa22.93■■□□□ 1.26
CLPB-205ENST00000535477 FPGT-TNNI3KV9GXZ4 949 aa22.93■■□□□ 1.26
CLPB-205ENST00000535477 NUP98P52948 1817 aa22.93■■□□□ 1.26
CLPB-205ENST00000535477 MYH14Q7Z406 1995 aaKnown RBP22.92■■□□□ 1.26
CLPB-205ENST00000535477 ONECUT3O60422 494 aaPredicted RBP22.92■■□□□ 1.26
CLPB-205ENST00000535477 LRRC24Q50LG9 513 aa22.92■■□□□ 1.26
CLPB-205ENST00000535477 ATG9AQ7Z3C6 839 aa22.92■■□□□ 1.26
CLPB-205ENST00000535477 KIF2CQ99661 725 aa22.92■■□□□ 1.26
CLPB-205ENST00000535477 CAMTA2O94983 1202 aa22.92■■□□□ 1.26
CLPB-205ENST00000535477 PLA2G12BQ9BX93 195 aa22.92■■□□□ 1.26
CLPB-205ENST00000535477 IRS4O14654 1257 aaPredicted RBP22.91■■□□□ 1.26
CLPB-205ENST00000535477 CDHR2Q9BYE9 1310 aa22.91■■□□□ 1.26
CLPB-205ENST00000535477 PUS3Q9BZE2 481 aaKnown RBP22.91■■□□□ 1.26
CLPB-205ENST00000535477 ANKRD36CQ5JPF3 1778 aa22.9■■□□□ 1.26
CLPB-205ENST00000535477 EYA2O00167 538 aa22.9■■□□□ 1.26
CLPB-205ENST00000535477 SMIM5Q71RC9 77 aa22.9■■□□□ 1.26
CLPB-205ENST00000535477 BOLA2Q9H3K6 86 aa22.9■■□□□ 1.26
CLPB-205ENST00000535477 DBNLQ9UJU6 430 aaKnown RBP22.9■■□□□ 1.26
CLPB-205ENST00000535477 CSF1RP07333 972 aa22.89■■□□□ 1.26
CLPB-205ENST00000535477 IL15P40933 162 aaPredicted RBP22.89■■□□□ 1.26
CLPB-205ENST00000535477 IFIT5Q13325 482 aaKnown RBP22.89■■□□□ 1.26
CLPB-205ENST00000535477 TAF7LQ5H9L4 462 aa22.89■■□□□ 1.26
CLPB-205ENST00000535477 SUSD4Q5VX71 490 aa22.89■■□□□ 1.26
CLPB-205ENST00000535477 CICQ96RK0 1608 aaPredicted RBP22.89■■□□□ 1.25
CLPB-205ENST00000535477 RREB1Q92766 1687 aa22.89■■□□□ 1.25
CLPB-205ENST00000535477 BTAF1O14981 1849 aa22.88■■□□□ 1.25
CLPB-205ENST00000535477 TTLL11Q8NHH1 800 aa22.88■■□□□ 1.25
CLPB-205ENST00000535477 NEUROD6Q96NK8 337 aa22.88■■□□□ 1.25
CLPB-205ENST00000535477 ANO2Q9NQ90 1003 aa22.88■■□□□ 1.25
CLPB-205ENST00000535477 CCNL1Q9UK58 526 aaPredicted RBP22.88■■□□□ 1.25
CLPB-205ENST00000535477 COL5A3P25940 1745 aaPredicted RBP22.88■■□□□ 1.25
CLPB-205ENST00000535477 CTSWP56202 376 aa22.87■■□□□ 1.25
CLPB-205ENST00000535477 DBNDD2Q9BQY9 259 aa22.87■■□□□ 1.25
CLPB-205ENST00000535477 GREM2Q9H772 168 aa22.87■■□□□ 1.25
CLPB-205ENST00000535477 NIP7Q9Y221 180 aaKnown RBP eCLIP22.87■■□□□ 1.25
CLPB-205ENST00000535477 IL25Q9H293 177 aa22.87■■□□□ 1.25
CLPB-205ENST00000535477 NHSQ6T4R5 1651 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms