RNA–Protein interactions for RNA: ENST00000534903.1

NPIPB3-206, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-206ENST00000534903 ARFGEF2Q9Y6D5 1785 aa6.81□□□□□ -1.32
NPIPB3-206ENST00000534903 COL24A1Q17RW2 1714 aa6.81□□□□□ -1.32
NPIPB3-206ENST00000534903 UBTFL1P0CB47 393 aaPredicted RBP6.8□□□□□ -1.32
NPIPB3-206ENST00000534903 BEND3Q5T5X7 828 aa6.8□□□□□ -1.32
NPIPB3-206ENST00000534903 POTEGQ6S5H5 508 aa6.8□□□□□ -1.32
NPIPB3-206ENST00000534903 KSR2Q6VAB6 950 aa6.8□□□□□ -1.32
NPIPB3-206ENST00000534903 RBM46Q8TBY0 533 aaKnown RBP6.8□□□□□ -1.32
NPIPB3-206ENST00000534903 ACSBG1Q96GR2 724 aa6.8□□□□□ -1.32
NPIPB3-206ENST00000534903 ZNF496Q96IT1 587 aaPredicted RBP6.8□□□□□ -1.32
NPIPB3-206ENST00000534903 DCTPP1Q9H773 170 aa6.8□□□□□ -1.32
NPIPB3-206ENST00000534903 HDAC5Q9UQL6 1122 aa6.8□□□□□ -1.32
NPIPB3-206ENST00000534903 PI4KAP2A4QPH2 592 aa6.79□□□□□ -1.32
NPIPB3-206ENST00000534903 FSTL1Q12841 308 aa6.79□□□□□ -1.32
NPIPB3-206ENST00000534903 PDIA6Q15084 440 aa6.79□□□□□ -1.32
NPIPB3-206ENST00000534903 PROSER3Q2NL68 480 aa6.79□□□□□ -1.32
NPIPB3-206ENST00000534903 PI4KAP1Q8N8J0 262 aa6.79□□□□□ -1.32
NPIPB3-206ENST00000534903 TMOD3Q9NYL9 352 aa6.79□□□□□ -1.32
NPIPB3-206ENST00000534903 ZBTB47Q9UFB7 747 aaPredicted RBP6.79□□□□□ -1.32
NPIPB3-206ENST00000534903 AFDNP55196 1824 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 PRAMEF22A3QJZ6 481 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 ANXA1P04083 346 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 ATP8B2P98198 1209 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 BMP2KLQ5H9B9 411 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 ANKRD45Q5TZF3 282 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 LRP10Q7Z4F1 713 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 VSIG10Q8N0Z9 540 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 FLAD1Q8NFF5 587 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 LINS1Q8NG48 757 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 DDX54Q8TDD1 881 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 LNPKQ9C0E8 428 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 USP44Q9H0E7 712 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 WWC3Q9ULE0 1092 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 MAP3K2Q9Y2U5 619 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 LRRFIP2Q9Y608 721 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 COL15A1P39059 1388 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 TJP1Q07157 1748 aa6.78□□□□□ -1.32
NPIPB3-206ENST00000534903 NHSQ6T4R5 1651 aa6.77□□□□□ -1.32
NPIPB3-206ENST00000534903 UTYO14607 1347 aa6.77□□□□□ -1.32
NPIPB3-206ENST00000534903 EIF5BO60841 1220 aaKnown RBP6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 NEXNQ0ZGT2 675 aa6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 MTX1Q13505 466 aa6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 COL23A1Q86Y22 540 aaPredicted RBP6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 ZNF579Q8NAF0 562 aaKnown RBP6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 SSH3Q8TE77 659 aa6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 XAGE3Q8WTP9 111 aa6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 DDRGK1Q96HY6 314 aa6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 TEX13AQ9BXU3 409 aaPredicted RBP6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 USP16Q9Y5T5 823 aa6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 ZNF831Q5JPB2 1677 aa6.77□□□□□ -1.33
NPIPB3-206ENST00000534903 QSER1Q2KHR3 1735 aa6.76□□□□□ -1.33
NPIPB3-206ENST00000534903 TUBGCP6Q96RT7 1819 aa6.76□□□□□ -1.33
NPIPB3-206ENST00000534903 GRM8O00222 908 aa6.76□□□□□ -1.33
NPIPB3-206ENST00000534903 RIC3Q7Z5B4 369 aa6.76□□□□□ -1.33
NPIPB3-206ENST00000534903 PLBD2Q8NHP8 589 aa6.76□□□□□ -1.33
NPIPB3-206ENST00000534903 METTL22Q9BUU2 404 aaPredicted RBP6.76□□□□□ -1.33
NPIPB3-206ENST00000534903 UPF2Q9HAU5 1272 aaKnown RBP6.76□□□□□ -1.33
NPIPB3-206ENST00000534903 AOX1Q06278 1338 aa6.76□□□□□ -1.33
NPIPB3-206ENST00000534903 PNMA6EA0A0J9YXQ4 647 aa6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 NEURL1BA8MQ27 555 aa6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 RAB11FIP3O75154 756 aa6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 MYL6BP14649 208 aa6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 AIMP1Q12904 312 aaKnown RBP6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 HSP90AB4PQ58FF6 505 aa6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 COPS6Q7L5N1 327 aa6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 PLEKHM2Q8IWE5 1019 aa6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 C16orf71Q8IYS4 520 aaPredicted RBP6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 PIGBQ92521 554 aa6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 LRRCC1Q9C099 1032 aa6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 C9orf78Q9NZ63 289 aaPredicted RBP6.75□□□□□ -1.33
NPIPB3-206ENST00000534903 ANKRD36CQ5JPF3 1778 aa6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 IGKV5-2P06315 115 aa6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 NBPF7P0C2Y1 421 aaPredicted RBP6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 CWF19L2Q2TBE0 894 aaKnown RBP6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 TTC22Q5TAA0 569 aa6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 ANKRD13DQ6ZTN6 518 aa6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 PPP1R42Q7Z4L9 355 aa6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 NPM2Q86SE8 214 aaKnown RBP6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 MYD88Q99836 296 aa6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 OSBPL3Q9H4L5 887 aa6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 NMRK2Q9NPI5 230 aa6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 ATG3Q9NT62 314 aa6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 CCNL1Q9UK58 526 aaPredicted RBP6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 SALL3Q9BXA9 1300 aa6.74□□□□□ -1.33
NPIPB3-206ENST00000534903 NBPF26B4DH59 902 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 SRGAP3O43295 1099 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 GALR2O43603 387 aaPredicted RBP6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 PTCD1O75127 700 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 CDC45O75419 566 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 STARD3NLO95772 234 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 HSPA1AP0DMV8 641 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 HSPA1BP0DMV9 641 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 HTRA3P83110 453 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 GCKRQ14397 625 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 MSL1Q68DK7 614 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 NBPF10Q6P3W6 841 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 ERC1Q8IUD2 1116 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 NBPF15Q8N660 670 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 KIF1BPQ96EK5 621 aa6.73□□□□□ -1.33
NPIPB3-206ENST00000534903 SUCLG2Q96I99 432 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms