RNA–Protein interactions for RNA: ENST00000534055.1

AP001360.1-201, humanhuman

TSL 2 BASIC

Gene AP001360.1, Length 518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001360.1-201ENST00000534055 REM2Q8IYK8 340 aaPredicted RBP13.55□□□□□ -0.24
AP001360.1-201ENST00000534055 VSIG10Q8N0Z9 540 aa13.55□□□□□ -0.24
AP001360.1-201ENST00000534055 PPIP5K2O43314 1243 aa13.54□□□□□ -0.24
AP001360.1-201ENST00000534055 TRPM4Q8TD43 1214 aa13.54□□□□□ -0.24
AP001360.1-201ENST00000534055 HIRAP54198 1017 aaPredicted RBP13.53□□□□□ -0.24
AP001360.1-201ENST00000534055 INTS3Q68E01 1043 aaKnown RBP13.53□□□□□ -0.24
AP001360.1-201ENST00000534055 CC2D2BQ6DHV5 1058 aa13.53□□□□□ -0.24
AP001360.1-201ENST00000534055 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
AP001360.1-201ENST00000534055 POLKQ9UBT6 870 aa13.53□□□□□ -0.24
AP001360.1-201ENST00000534055 NPC1L1Q9UHC9 1359 aa13.53□□□□□ -0.24
AP001360.1-201ENST00000534055 SNED1Q8TER0 1413 aa13.53□□□□□ -0.24
AP001360.1-201ENST00000534055 FAM177BA6PVY3 158 aa13.52□□□□□ -0.25
AP001360.1-201ENST00000534055 GPR25O00155 361 aa13.52□□□□□ -0.25
AP001360.1-201ENST00000534055 CAMTA2O94983 1202 aa13.52□□□□□ -0.25
AP001360.1-201ENST00000534055 NEUROD1Q13562 356 aa13.52□□□□□ -0.25
AP001360.1-201ENST00000534055 KRT26Q7Z3Y9 468 aa13.52□□□□□ -0.25
AP001360.1-201ENST00000534055 TTC5Q8N0Z6 440 aa13.52□□□□□ -0.25
AP001360.1-201ENST00000534055 PAPPA2Q9BXP8 1791 aa13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 CDHR2Q9BYE9 1310 aa13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 KLRG2A4D1S0 409 aaPredicted RBP13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 GTF2E1P29083 439 aaPredicted RBP13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 IL6STP40189 918 aaPredicted RBP13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 CXCL9Q07325 125 aa13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 AOC3Q16853 763 aa13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 TPTE2Q6XPS3 522 aa13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 RASAL3Q86YV0 1011 aa13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 TESK2Q96S53 571 aa13.51□□□□□ -0.25
AP001360.1-201ENST00000534055 CUL9Q8IWT3 2517 aa13.5□□□□□ -0.25
AP001360.1-201ENST00000534055 H0YGN5 161 aa13.5□□□□□ -0.25
AP001360.1-201ENST00000534055 TCERG1O14776 1098 aaKnown RBP13.5□□□□□ -0.25
AP001360.1-201ENST00000534055 SLC24A1O60721 1099 aa13.5□□□□□ -0.25
AP001360.1-201ENST00000534055 EN2P19622 333 aaPredicted RBP13.5□□□□□ -0.25
AP001360.1-201ENST00000534055 DZIP3Q86Y13 1208 aaKnown RBP13.5□□□□□ -0.25
AP001360.1-201ENST00000534055 AEBP1Q8IUX7 1158 aa13.5□□□□□ -0.25
AP001360.1-201ENST00000534055 SIN3AQ96ST3 1273 aa13.5□□□□□ -0.25
AP001360.1-201ENST00000534055 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
AP001360.1-201ENST00000534055 MRC1P22897 1456 aa13.49□□□□□ -0.25
AP001360.1-201ENST00000534055 TRIOBPQ9H2D6 2365 aa13.49□□□□□ -0.25
AP001360.1-201ENST00000534055 ADM5C9JUS6 153 aa13.49□□□□□ -0.25
AP001360.1-201ENST00000534055 H7C1D1 291 aa13.49□□□□□ -0.25
AP001360.1-201ENST00000534055 FKTNO75072 461 aa13.49□□□□□ -0.25
AP001360.1-201ENST00000534055 GRIPAP1Q4V328 841 aa13.49□□□□□ -0.25
AP001360.1-201ENST00000534055 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
AP001360.1-201ENST00000534055 ZNRF3Q9ULT6 936 aa13.49□□□□□ -0.25
AP001360.1-201ENST00000534055 ZNF652Q9Y2D9 606 aa13.49□□□□□ -0.25
AP001360.1-201ENST00000534055 RPGRQ92834 1020 aaKnown RBP13.48□□□□□ -0.25
AP001360.1-201ENST00000534055 DCPSQ96C86 337 aaKnown RBP13.48□□□□□ -0.25
AP001360.1-201ENST00000534055 RBM27Q9P2N5 1060 aaKnown RBP13.48□□□□□ -0.25
AP001360.1-201ENST00000534055 CNOT7Q9UIV1 285 aaKnown RBP13.48□□□□□ -0.25
AP001360.1-201ENST00000534055 RBBP6Q7Z6E9 1792 aaKnown RBP13.48□□□□□ -0.25
AP001360.1-201ENST00000534055 SHTN1A0MZ66 631 aa13.47□□□□□ -0.25
AP001360.1-201ENST00000534055 RAD17O75943 681 aa13.47□□□□□ -0.25
AP001360.1-201ENST00000534055 MICALL2Q8IY33 904 aa13.47□□□□□ -0.25
AP001360.1-201ENST00000534055 TMX4Q9H1E5 349 aaPredicted RBP13.47□□□□□ -0.25
AP001360.1-201ENST00000534055 NIP7Q9Y221 180 aaKnown RBP eCLIP13.47□□□□□ -0.25
AP001360.1-201ENST00000534055 TRIM17Q9Y577 477 aa13.47□□□□□ -0.25
AP001360.1-201ENST00000534055 UBR2Q8IWV8 1755 aa13.46□□□□□ -0.25
AP001360.1-201ENST00000534055 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.25
AP001360.1-201ENST00000534055 TNIP1Q15025 636 aa13.46□□□□□ -0.25
AP001360.1-201ENST00000534055 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.25
AP001360.1-201ENST00000534055 PPEF1O14829 653 aaPredicted RBP13.45□□□□□ -0.26
AP001360.1-201ENST00000534055 A1BGP04217 495 aa13.45□□□□□ -0.26
AP001360.1-201ENST00000534055 NOM1Q5C9Z4 860 aaKnown RBP13.45□□□□□ -0.26
AP001360.1-201ENST00000534055 SULT6B1Q6IMI4 303 aa13.45□□□□□ -0.26
AP001360.1-201ENST00000534055 CLEC4GQ6UXB4 293 aa13.45□□□□□ -0.26
AP001360.1-201ENST00000534055 SAMD7Q7Z3H4 446 aa13.45□□□□□ -0.26
AP001360.1-201ENST00000534055 TMEM106CQ9BVX2 250 aa13.45□□□□□ -0.26
AP001360.1-201ENST00000534055 CARD14Q9BXL6 1004 aa13.45□□□□□ -0.26
AP001360.1-201ENST00000534055 TBC1D10BQ4KMP7 808 aaPredicted RBP13.44□□□□□ -0.26
AP001360.1-201ENST00000534055 SLC51AQ86UW1 340 aa13.44□□□□□ -0.26
AP001360.1-201ENST00000534055 COL25A1Q9BXS0 654 aaPredicted RBP13.44□□□□□ -0.26
AP001360.1-201ENST00000534055 HEG1Q9ULI3 1381 aa13.44□□□□□ -0.26
AP001360.1-201ENST00000534055 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
AP001360.1-201ENST00000534055 SUPT20HQ8NEM7 779 aa13.43□□□□□ -0.26
AP001360.1-201ENST00000534055 ZNF496Q96IT1 587 aaPredicted RBP13.43□□□□□ -0.26
AP001360.1-201ENST00000534055 SZT2Q5T011 3432 aa13.43□□□□□ -0.26
AP001360.1-201ENST00000534055 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
AP001360.1-201ENST00000534055 RBM26Q5T8P6 1007 aaKnown RBP13.42□□□□□ -0.26
AP001360.1-201ENST00000534055 OTOP1Q7RTM1 612 aa13.42□□□□□ -0.26
AP001360.1-201ENST00000534055 VPS33BQ9H267 617 aa13.42□□□□□ -0.26
AP001360.1-201ENST00000534055 PIP4K2AP48426 406 aaPredicted RBP13.41□□□□□ -0.26
AP001360.1-201ENST00000534055 CDCA5Q96FF9 252 aa13.41□□□□□ -0.26
AP001360.1-201ENST00000534055 RBM17Q96I25 401 aaKnown RBP13.41□□□□□ -0.26
AP001360.1-201ENST00000534055 SREBF2Q12772 1141 aa13.4□□□□□ -0.26
AP001360.1-201ENST00000534055 MKRN3Q13064 507 aaKnown RBP13.4□□□□□ -0.26
AP001360.1-201ENST00000534055 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
AP001360.1-201ENST00000534055 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
AP001360.1-201ENST00000534055 ABCC12Q96J65 1359 aa13.4□□□□□ -0.26
AP001360.1-201ENST00000534055 PRAMEF22A3QJZ6 481 aa13.39□□□□□ -0.27
AP001360.1-201ENST00000534055 EGFRP00533 1210 aa13.39□□□□□ -0.27
AP001360.1-201ENST00000534055 TM4SF4P48230 202 aa13.39□□□□□ -0.27
AP001360.1-201ENST00000534055 DPF3Q92784 378 aa13.39□□□□□ -0.27
AP001360.1-201ENST00000534055 ARMC5Q96C12 935 aa13.39□□□□□ -0.27
AP001360.1-201ENST00000534055 R3HDMLQ9H3Y0 253 aa13.39□□□□□ -0.27
AP001360.1-201ENST00000534055 GGA3Q9NZ52 723 aa13.39□□□□□ -0.27
AP001360.1-201ENST00000534055 FKBP1BP68106 108 aa13.38□□□□□ -0.27
AP001360.1-201ENST00000534055 SLC4A8Q2Y0W8 1093 aa13.38□□□□□ -0.27
AP001360.1-201ENST00000534055 CDCA8Q53HL2 280 aa13.38□□□□□ -0.27
AP001360.1-201ENST00000534055 ZNF790Q6PG37 636 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms