RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 WDR63Q8IWG1 891 aa12.39□□□□□ -0.43
FOXRED1-216ENST00000533839 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
FOXRED1-216ENST00000533839 SH3TC1Q8TE82 1336 aa12.38□□□□□ -0.43
FOXRED1-216ENST00000533839 RASSF7Q02833 373 aa12.38□□□□□ -0.43
FOXRED1-216ENST00000533839 CRY2Q49AN0 593 aa12.38□□□□□ -0.43
FOXRED1-216ENST00000533839 CCDC184Q52MB2 194 aa12.38□□□□□ -0.43
FOXRED1-216ENST00000533839 NLRP10Q86W26 655 aa12.38□□□□□ -0.43
FOXRED1-216ENST00000533839 FAM9BQ8IZU0 186 aa12.38□□□□□ -0.43
FOXRED1-216ENST00000533839 RRAGCQ9HB90 399 aa12.38□□□□□ -0.43
FOXRED1-216ENST00000533839 NRXN2Q9P2S2 1712 aa12.37□□□□□ -0.43
FOXRED1-216ENST00000533839 NFKBIEO00221 500 aa12.37□□□□□ -0.43
FOXRED1-216ENST00000533839 KIF3CO14782 793 aa12.37□□□□□ -0.43
FOXRED1-216ENST00000533839 NTSR2O95665 410 aa12.37□□□□□ -0.43
FOXRED1-216ENST00000533839 FKBP4Q02790 459 aaKnown RBP eCLIP12.37□□□□□ -0.43
FOXRED1-216ENST00000533839 TRIM28Q13263 835 aaKnown RBP12.37□□□□□ -0.43
FOXRED1-216ENST00000533839 DDX46Q7L014 1031 aaKnown RBP12.37□□□□□ -0.43
FOXRED1-216ENST00000533839 C7orf43Q8WVR3 580 aa12.37□□□□□ -0.43
FOXRED1-216ENST00000533839 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
FOXRED1-216ENST00000533839 AFDNP55196 1824 aaKnown RBP12.37□□□□□ -0.43
FOXRED1-216ENST00000533839 KDM3BQ7LBC6 1761 aa12.36□□□□□ -0.43
FOXRED1-216ENST00000533839 TMC4Q7Z404 712 aa12.36□□□□□ -0.43
FOXRED1-216ENST00000533839 SYNE4Q8N205 404 aa12.36□□□□□ -0.43
FOXRED1-216ENST00000533839 C8orf58Q8NAV2 365 aa12.36□□□□□ -0.43
FOXRED1-216ENST00000533839 SUPT20HQ8NEM7 779 aa12.36□□□□□ -0.43
FOXRED1-216ENST00000533839 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
FOXRED1-216ENST00000533839 VPS33BQ9H267 617 aa12.36□□□□□ -0.43
FOXRED1-216ENST00000533839 NMRK2Q9NPI5 230 aa12.36□□□□□ -0.43
FOXRED1-216ENST00000533839 UBN2Q6ZU65 1347 aa12.36□□□□□ -0.43
FOXRED1-216ENST00000533839 NEXNQ0ZGT2 675 aa12.35□□□□□ -0.43
FOXRED1-216ENST00000533839 FSTL1Q12841 308 aa12.35□□□□□ -0.43
FOXRED1-216ENST00000533839 TWISTNBQ3B726 338 aaPredicted RBP12.35□□□□□ -0.43
FOXRED1-216ENST00000533839 MYH16Q9H6N6 1097 aa12.35□□□□□ -0.43
FOXRED1-216ENST00000533839 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
FOXRED1-216ENST00000533839 SCN7AQ01118 1682 aa12.35□□□□□ -0.43
FOXRED1-216ENST00000533839 ARFGEF1Q9Y6D6 1849 aa12.34□□□□□ -0.43
FOXRED1-216ENST00000533839 HSPA6P17066 643 aa12.34□□□□□ -0.43
FOXRED1-216ENST00000533839 PSMD1Q99460 953 aa12.34□□□□□ -0.43
FOXRED1-216ENST00000533839 ISCA1Q9BUE6 129 aa12.34□□□□□ -0.43
FOXRED1-216ENST00000533839 KIAA1551Q9HCM1 1747 aa12.34□□□□□ -0.43
FOXRED1-216ENST00000533839 IQCA1LA6NCM1 817 aa12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 ATP5J2-PTCD1G3V325 749 aa12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 PPEF1O14829 653 aaPredicted RBP12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 HCLS1P14317 486 aaPredicted RBP12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 IARSP41252 1262 aaKnown RBP12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 APLP1P51693 650 aa12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 EIF6P56537 245 aaKnown RBP12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 KSR2Q6VAB6 950 aa12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 SP8Q8IXZ3 490 aa12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 CCDC191Q8NCU4 936 aa12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 RIC1Q4ADV7 1423 aa12.33□□□□□ -0.44
FOXRED1-216ENST00000533839 TCERG1O14776 1098 aaKnown RBP12.32□□□□□ -0.44
FOXRED1-216ENST00000533839 ZBTB38Q8NAP3 1195 aaPredicted RBP12.32□□□□□ -0.44
FOXRED1-216ENST00000533839 TSR2Q969E8 191 aaKnown RBP12.32□□□□□ -0.44
FOXRED1-216ENST00000533839 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
FOXRED1-216ENST00000533839 METTL22Q9BUU2 404 aaPredicted RBP12.32□□□□□ -0.44
FOXRED1-216ENST00000533839 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
FOXRED1-216ENST00000533839 ATP6V0A2Q9Y487 856 aa12.32□□□□□ -0.44
FOXRED1-216ENST00000533839 LAMB4A4D0S4 1761 aa12.32□□□□□ -0.44
FOXRED1-216ENST00000533839 GOLGB1Q14789 3259 aaKnown RBP12.32□□□□□ -0.44
FOXRED1-216ENST00000533839 IRS4O14654 1257 aaPredicted RBP12.31□□□□□ -0.44
FOXRED1-216ENST00000533839 GRAPQ13588 217 aa12.31□□□□□ -0.44
FOXRED1-216ENST00000533839 SF3B3Q15393 1217 aaKnown RBP12.31□□□□□ -0.44
FOXRED1-216ENST00000533839 LARGE2Q8N3Y3 721 aa12.31□□□□□ -0.44
FOXRED1-216ENST00000533839 MPNDQ8N594 471 aa12.31□□□□□ -0.44
FOXRED1-216ENST00000533839 TSPYL6Q8N831 410 aa12.31□□□□□ -0.44
FOXRED1-216ENST00000533839 GRAPLQ8TC17 118 aaPredicted RBP12.31□□□□□ -0.44
FOXRED1-216ENST00000533839 MYD88Q99836 296 aa12.31□□□□□ -0.44
FOXRED1-216ENST00000533839 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
FOXRED1-216ENST00000533839 BRCA1P38398 1863 aaKnown RBP12.31□□□□□ -0.44
FOXRED1-216ENST00000533839 BCORQ6W2J9 1755 aa12.3□□□□□ -0.44
FOXRED1-216ENST00000533839 PRELPP51888 382 aa12.3□□□□□ -0.44
FOXRED1-216ENST00000533839 DPP8Q6V1X1 898 aaPredicted RBP12.3□□□□□ -0.44
FOXRED1-216ENST00000533839 NIM1KQ8IY84 436 aa12.3□□□□□ -0.44
FOXRED1-216ENST00000533839 MAP3K2Q9Y2U5 619 aa12.3□□□□□ -0.44
FOXRED1-216ENST00000533839 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
FOXRED1-216ENST00000533839 PI4KAP2A4QPH2 592 aa12.29□□□□□ -0.44
FOXRED1-216ENST00000533839 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
FOXRED1-216ENST00000533839 PCCAP05165 728 aaPredicted RBP12.29□□□□□ -0.44
FOXRED1-216ENST00000533839 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
FOXRED1-216ENST00000533839 CCDC152Q4G0S7 254 aa12.29□□□□□ -0.44
FOXRED1-216ENST00000533839 PI4KAP1Q8N8J0 262 aa12.29□□□□□ -0.44
FOXRED1-216ENST00000533839 NUP98P52948 1817 aa12.29□□□□□ -0.44
FOXRED1-216ENST00000533839 FZD9O00144 591 aa12.28□□□□□ -0.44
FOXRED1-216ENST00000533839 PPIP5K2O43314 1243 aa12.28□□□□□ -0.44
FOXRED1-216ENST00000533839 PDE8AO60658 829 aa12.28□□□□□ -0.44
FOXRED1-216ENST00000533839 VAMP4O75379 141 aa12.28□□□□□ -0.44
FOXRED1-216ENST00000533839 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
FOXRED1-216ENST00000533839 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
FOXRED1-216ENST00000533839 OLFM4Q6UX06 510 aa12.28□□□□□ -0.44
FOXRED1-216ENST00000533839 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
FOXRED1-216ENST00000533839 GPC2Q8N158 579 aa12.28□□□□□ -0.44
FOXRED1-216ENST00000533839 ABCC4O15439 1325 aa12.28□□□□□ -0.44
FOXRED1-216ENST00000533839 G3V3G9 751 aa12.27□□□□□ -0.45
FOXRED1-216ENST00000533839 EXOSC9Q06265 439 aaKnown RBP12.27□□□□□ -0.45
FOXRED1-216ENST00000533839 FKBP5Q13451 457 aaPredicted RBP12.27□□□□□ -0.45
FOXRED1-216ENST00000533839 DCAF8Q5TAQ9 597 aa12.27□□□□□ -0.45
FOXRED1-216ENST00000533839 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms