RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 EIF2S2P20042 333 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 HSPA4P34932 840 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 MTX1Q13505 466 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 BEND3Q5T5X7 828 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ZNF530Q6P9A1 599 aaPredicted RBP9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 CLASRPQ8N2M8 674 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 PHAXQ9H814 394 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 USP42Q9H9J4 1324 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 HIP1O00291 1037 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 PRPF40AO75400 957 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 BRD1O95696 1058 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ZSCAN23Q3MJ62 389 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ESCO1Q5FWF5 840 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 NBPF6Q5VWK0 638 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 GAS2L3Q86XJ1 694 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ZGPATQ8N5A5 531 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 NBPF4Q96M43 638 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 HYPKQ9NX55 129 aa9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 WDR33Q9C0J8 1336 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-212ENST00000533232 PI4KAP2A4QPH2 592 aa9.44□□□□□ -0.9
SOX9-AS1-212ENST00000533232 RIOK3O14730 519 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-212ENST00000533232 OS9Q13438 667 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-212ENST00000533232 CAVIN1Q6NZI2 390 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-212ENST00000533232 PI4KAP1Q8N8J0 262 aa9.44□□□□□ -0.9
SOX9-AS1-212ENST00000533232 CHPF2Q9P2E5 772 aa9.44□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ATP6V1DQ9Y5K8 247 aa9.44□□□□□ -0.9
SOX9-AS1-212ENST00000533232 RAD50Q92878 1312 aa9.44□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 SGSM2O43147 1006 aa9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 RNMTO43148 476 aaKnown RBP9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 PPP4R3BQ5MIZ7 849 aa9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 KSR2Q6VAB6 950 aa9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 USHBP1Q8N6Y0 703 aa9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ZFP91Q96JP5 570 aaPredicted RBP9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 IL1RAPL2Q9NP60 686 aa9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 C9orf78Q9NZ63 289 aaPredicted RBP9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 PLEKHG2Q9H7P9 1386 aa9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 SLIT3O75094 1523 aa9.43□□□□□ -0.9
SOX9-AS1-212ENST00000533232 LETM1O95202 739 aaPredicted RBP9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 GCP02774 474 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 CSPP1Q1MSJ5 1256 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 LRSAM1Q6UWE0 723 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ARHGEF25Q86VW2 580 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 NUTM1Q86Y26 1132 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 PI4K2BQ8TCG2 481 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 LGR6Q9HBX8 967 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 DIAPH3Q9NSV4 1193 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ZDHHC9Q9Y397 364 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 IFIT2P09913 472 aaKnown RBP9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 MSNP26038 577 aaKnown RBP9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 TSHZ3Q63HK5 1081 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 IFNLR1Q8IU57 520 aaPredicted RBP9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 LINS1Q8NG48 757 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ZSCAN31Q96LW9 406 aaPredicted RBP9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ECHDC1Q9NTX5 307 aa9.42□□□□□ -0.9
SOX9-AS1-212ENST00000533232 KIF1AQ12756 1690 aa9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 HEG1Q9ULI3 1381 aa9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 GIGYF1O75420 1035 aaPredicted RBP9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 NBPF7P0C2Y1 421 aaPredicted RBP9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 PKP1Q13835 747 aa9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ZSCAN30Q86W11 494 aa9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 EVI5LQ96CN4 794 aa9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 TM6SF1Q9BZW5 370 aa9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 LIMCH1Q9UPQ0 1083 aa9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 CAMTA1Q9Y6Y1 1673 aa9.41□□□□□ -0.9
SOX9-AS1-212ENST00000533232 SETD1BQ9UPS6 1966 aaKnown RBP9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 ADCY9O60503 1353 aa9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 CRYBG1Q9Y4K1 1723 aa9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 KDM4FA0A1W2PPD8 638 aa9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 MCM5P33992 734 aa9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 NEXNQ0ZGT2 675 aa9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 UNC5CLQ8IV45 518 aa9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 TMC2Q8TDI7 906 aa9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 DDX21Q9NR30 783 aaKnown RBP eCLIP9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 SH2B1Q9NRF2 756 aaPredicted RBP9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 PALD1Q9ULE6 856 aa9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 MAP3K2Q9Y2U5 619 aa9.4□□□□□ -0.9
SOX9-AS1-212ENST00000533232 MST1RQ04912 1400 aa9.4□□□□□ -0.91
SOX9-AS1-212ENST00000533232 UTYO14607 1347 aa9.4□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ZBTB7CA1YPR0 619 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ZKSCAN1P17029 563 aaPredicted RBP9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 PSMA5P28066 241 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 G3BP1Q13283 466 aaKnown RBP eCLIP9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 LARP1Q6PKG0 1096 aaKnown RBP9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 MPRIPQ6WCQ1 1025 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 FAM184AQ8NB25 1140 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 GPT2Q8TD30 523 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ANKRD24Q8TF21 1146 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 LSG1Q9H089 658 aaKnown RBP9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 SNX14Q9Y5W7 946 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 NPHP4O75161 1426 aaPredicted RBP9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 GRM8O00222 908 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 VPS53Q5VIR6 699 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 RNF20Q5VTR2 975 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 TMEM87AQ8NBN3 555 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 NAP1L5Q96NT1 182 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms