RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 GOLGA2Q08379 1002 aa16.67■□□□□ 0.26
TRAPPC4-212ENST00000533058 CCDC30Q5VVM6 783 aa16.67■□□□□ 0.26
TRAPPC4-212ENST00000533058 MYH16Q9H6N6 1097 aa16.67■□□□□ 0.26
TRAPPC4-212ENST00000533058 ABCC12Q96J65 1359 aa16.66■□□□□ 0.26
TRAPPC4-212ENST00000533058 NFKBIEO00221 500 aa16.66■□□□□ 0.26
TRAPPC4-212ENST00000533058 ELL2O00472 640 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC4-212ENST00000533058 COL11A2P13942 1736 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC4-212ENST00000533058 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
TRAPPC4-212ENST00000533058 NLRP10Q86W26 655 aa16.66■□□□□ 0.26
TRAPPC4-212ENST00000533058 RNF181Q9P0P0 153 aa16.66■□□□□ 0.26
TRAPPC4-212ENST00000533058 TSPYL6Q8N831 410 aa16.65■□□□□ 0.26
TRAPPC4-212ENST00000533058 YTHDC1Q96MU7 727 aaKnown RBP16.65■□□□□ 0.26
TRAPPC4-212ENST00000533058 ISCA1Q9BUE6 129 aa16.65■□□□□ 0.26
TRAPPC4-212ENST00000533058 C1QTNF8P60827 252 aa16.64■□□□□ 0.25
TRAPPC4-212ENST00000533058 RASSF7Q02833 373 aa16.64■□□□□ 0.25
TRAPPC4-212ENST00000533058 NLRP3Q96P20 1036 aa16.64■□□□□ 0.25
TRAPPC4-212ENST00000533058 CRAMP1Q96RY5 1269 aa16.64■□□□□ 0.25
TRAPPC4-212ENST00000533058 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
TRAPPC4-212ENST00000533058 E9PSI1 815 aa16.63■□□□□ 0.25
TRAPPC4-212ENST00000533058 PRELPP51888 382 aa16.63■□□□□ 0.25
TRAPPC4-212ENST00000533058 CC2D2BQ6DHV5 1058 aa16.63■□□□□ 0.25
TRAPPC4-212ENST00000533058 TAOK3Q9H2K8 898 aa16.63■□□□□ 0.25
TRAPPC4-212ENST00000533058 FANCIQ9NVI1 1328 aa16.63■□□□□ 0.25
TRAPPC4-212ENST00000533058 SLX4Q8IY92 1834 aa16.62■□□□□ 0.25
TRAPPC4-212ENST00000533058 TWISTNBQ3B726 338 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC4-212ENST00000533058 GRIPAP1Q4V328 841 aa16.62■□□□□ 0.25
TRAPPC4-212ENST00000533058 CCDC93Q567U6 631 aa16.62■□□□□ 0.25
TRAPPC4-212ENST00000533058 RTKN2Q8IZC4 609 aa16.62■□□□□ 0.25
TRAPPC4-212ENST00000533058 RPGRQ92834 1020 aaKnown RBP16.62■□□□□ 0.25
TRAPPC4-212ENST00000533058 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
TRAPPC4-212ENST00000533058 SPINK5Q9NQ38 1064 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC4-212ENST00000533058 TRMT112Q9UI30 125 aaKnown RBP16.62■□□□□ 0.25
TRAPPC4-212ENST00000533058 SH3TC1Q8TE82 1336 aa16.62■□□□□ 0.25
TRAPPC4-212ENST00000533058 ARFGEF2Q9Y6D5 1785 aa16.61■□□□□ 0.25
TRAPPC4-212ENST00000533058 SBF1O95248 1867 aa16.61■□□□□ 0.25
TRAPPC4-212ENST00000533058 KIF3CO14782 793 aa16.61■□□□□ 0.25
TRAPPC4-212ENST00000533058 RIC3Q7Z5B4 369 aa16.61■□□□□ 0.25
TRAPPC4-212ENST00000533058 ZNF526Q8TF50 670 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC4-212ENST00000533058 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
TRAPPC4-212ENST00000533058 RBM17Q96I25 401 aaKnown RBP16.61■□□□□ 0.25
TRAPPC4-212ENST00000533058 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC4-212ENST00000533058 DDX58O95786 925 aaKnown RBP16.6■□□□□ 0.25
TRAPPC4-212ENST00000533058 SLFN5Q08AF3 891 aa16.6■□□□□ 0.25
TRAPPC4-212ENST00000533058 STK31Q9BXU1 1019 aa16.6■□□□□ 0.25
TRAPPC4-212ENST00000533058 ZBED9Q6R2W3 1325 aa16.6■□□□□ 0.25
TRAPPC4-212ENST00000533058 KDM2BQ8NHM5 1336 aa16.6■□□□□ 0.25
TRAPPC4-212ENST00000533058 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
TRAPPC4-212ENST00000533058 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
TRAPPC4-212ENST00000533058 EXOSC9Q06265 439 aaKnown RBP16.59■□□□□ 0.25
TRAPPC4-212ENST00000533058 C3orf67Q6ZVT6 689 aa16.59■□□□□ 0.25
TRAPPC4-212ENST00000533058 ANKRD36CQ5JPF3 1778 aa16.59■□□□□ 0.25
TRAPPC4-212ENST00000533058 GLTPD2A6NH11 291 aa16.58■□□□□ 0.24
TRAPPC4-212ENST00000533058 VAMP4O75379 141 aa16.58■□□□□ 0.24
TRAPPC4-212ENST00000533058 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRAPPC4-212ENST00000533058 KSR2Q6VAB6 950 aa16.58■□□□□ 0.24
TRAPPC4-212ENST00000533058 PSMD1Q99460 953 aa16.58■□□□□ 0.24
TRAPPC4-212ENST00000533058 SNED1Q8TER0 1413 aa16.57■□□□□ 0.24
TRAPPC4-212ENST00000533058 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
TRAPPC4-212ENST00000533058 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
TRAPPC4-212ENST00000533058 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
TRAPPC4-212ENST00000533058 METTL22Q9BUU2 404 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC4-212ENST00000533058 BBOX1O75936 387 aa16.56■□□□□ 0.24
TRAPPC4-212ENST00000533058 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
TRAPPC4-212ENST00000533058 HCLS1P14317 486 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-212ENST00000533058 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
TRAPPC4-212ENST00000533058 SF3B3Q15393 1217 aaKnown RBP16.56■□□□□ 0.24
TRAPPC4-212ENST00000533058 DPY19L2Q6NUT2 758 aa16.56■□□□□ 0.24
TRAPPC4-212ENST00000533058 ZBTB38Q8NAP3 1195 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-212ENST00000533058 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
TRAPPC4-212ENST00000533058 TOMM70O94826 608 aa16.55■□□□□ 0.24
TRAPPC4-212ENST00000533058 FAM89AQ96GI7 184 aa16.55■□□□□ 0.24
TRAPPC4-212ENST00000533058 MYD88Q99836 296 aa16.55■□□□□ 0.24
TRAPPC4-212ENST00000533058 ABCC4O15439 1325 aa16.54■□□□□ 0.24
TRAPPC4-212ENST00000533058 PI4KAP2A4QPH2 592 aa16.54■□□□□ 0.24
TRAPPC4-212ENST00000533058 PPEF1O14829 653 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC4-212ENST00000533058 OLFM4Q6UX06 510 aa16.54■□□□□ 0.24
TRAPPC4-212ENST00000533058 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
TRAPPC4-212ENST00000533058 TMC4Q7Z404 712 aa16.54■□□□□ 0.24
TRAPPC4-212ENST00000533058 PI4KAP1Q8N8J0 262 aa16.54■□□□□ 0.24
TRAPPC4-212ENST00000533058 MAP3K2Q9Y2U5 619 aa16.54■□□□□ 0.24
TRAPPC4-212ENST00000533058 ATP6V0A2Q9Y487 856 aa16.54■□□□□ 0.24
TRAPPC4-212ENST00000533058 IRS4O14654 1257 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC4-212ENST00000533058 TCERG1O14776 1098 aaKnown RBP16.53■□□□□ 0.24
TRAPPC4-212ENST00000533058 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC4-212ENST00000533058 SP8Q8IXZ3 490 aa16.53■□□□□ 0.24
TRAPPC4-212ENST00000533058 TMX4Q9H1E5 349 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC4-212ENST00000533058 VPS33BQ9H267 617 aa16.53■□□□□ 0.24
TRAPPC4-212ENST00000533058 CWC25Q9NXE8 425 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC4-212ENST00000533058 VEGFAP15692 232 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC4-212ENST00000533058 IARSP41252 1262 aaKnown RBP16.52■□□□□ 0.24
TRAPPC4-212ENST00000533058 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
TRAPPC4-212ENST00000533058 FLIIQ13045 1269 aa16.52■□□□□ 0.24
TRAPPC4-212ENST00000533058 GRAPQ13588 217 aa16.52■□□□□ 0.24
TRAPPC4-212ENST00000533058 G2E3Q7L622 706 aa16.52■□□□□ 0.24
TRAPPC4-212ENST00000533058 GRAPLQ8TC17 118 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC4-212ENST00000533058 RRAGCQ9HB90 399 aa16.52■□□□□ 0.24
TRAPPC4-212ENST00000533058 IGKV5-2P06315 115 aa16.51■□□□□ 0.23
TRAPPC4-212ENST00000533058 RBM46Q8TBY0 533 aaKnown RBP16.51■□□□□ 0.23
TRAPPC4-212ENST00000533058 RTFDC1Q9BY42 306 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC4-212ENST00000533058 ZNF277Q9NRM2 450 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms