RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 CCDC136Q96JN2 1154 aa18.56■□□□□ 0.56
NXF1-214ENST00000533048 LAMB2P55268 1798 aa18.55■□□□□ 0.56
NXF1-214ENST00000533048 PHF14O94880 888 aa18.55■□□□□ 0.56
NXF1-214ENST00000533048 HDAC1Q13547 482 aaPredicted RBP18.55■□□□□ 0.56
NXF1-214ENST00000533048 USPL1Q5W0Q7 1092 aa18.55■□□□□ 0.56
NXF1-214ENST00000533048 RPAP2Q8IXW5 612 aaPredicted RBP18.55■□□□□ 0.56
NXF1-214ENST00000533048 C1orf115Q9H7X2 142 aa18.55■□□□□ 0.56
NXF1-214ENST00000533048 ANO8Q9HCE9 1232 aaPredicted RBP18.55■□□□□ 0.56
NXF1-214ENST00000533048 TFCP2L1Q9NZI6 479 aa18.55■□□□□ 0.56
NXF1-214ENST00000533048 SRP68Q9UHB9 627 aaKnown RBP18.55■□□□□ 0.56
NXF1-214ENST00000533048 KDM2BQ8NHM5 1336 aa18.54■□□□□ 0.56
NXF1-214ENST00000533048 PCCAP05165 728 aaPredicted RBP18.54■□□□□ 0.56
NXF1-214ENST00000533048 MTX1Q13505 466 aa18.54■□□□□ 0.56
NXF1-214ENST00000533048 CEP85Q6P2H3 762 aa18.54■□□□□ 0.56
NXF1-214ENST00000533048 ANKRD44Q8N8A2 993 aa18.54■□□□□ 0.56
NXF1-214ENST00000533048 ZBTB38Q8NAP3 1195 aaPredicted RBP18.54■□□□□ 0.56
NXF1-214ENST00000533048 UPF1Q92900 1129 aaKnown RBP eCLIP18.54■□□□□ 0.56
NXF1-214ENST00000533048 LRRFIP2Q9Y608 721 aaKnown RBP18.54■□□□□ 0.56
NXF1-214ENST00000533048 PNPLA7Q6ZV29 1317 aa18.53■□□□□ 0.56
NXF1-214ENST00000533048 CDHR2Q9BYE9 1310 aa18.53■□□□□ 0.56
NXF1-214ENST00000533048 GPTP24298 496 aa18.53■□□□□ 0.56
NXF1-214ENST00000533048 SLC15A2Q16348 729 aa18.53■□□□□ 0.56
NXF1-214ENST00000533048 B4GALNT3Q6L9W6 998 aa18.53■□□□□ 0.56
NXF1-214ENST00000533048 UBE3BQ7Z3V4 1068 aa18.53■□□□□ 0.56
NXF1-214ENST00000533048 SIRT2Q8IXJ6 389 aa18.53■□□□□ 0.56
NXF1-214ENST00000533048 KAZALD1Q96I82 304 aa18.53■□□□□ 0.56
NXF1-214ENST00000533048 GYS1P13807 737 aa18.52■□□□□ 0.56
NXF1-214ENST00000533048 STK32BQ9NY57 414 aa18.52■□□□□ 0.56
NXF1-214ENST00000533048 NIP7Q9Y221 180 aaKnown RBP eCLIP18.52■□□□□ 0.56
NXF1-214ENST00000533048 MYH3P11055 1940 aa18.51■□□□□ 0.55
NXF1-214ENST00000533048 RABL6Q3YEC7 729 aaPredicted RBP18.51■□□□□ 0.55
NXF1-214ENST00000533048 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
NXF1-214ENST00000533048 COL23A1Q86Y22 540 aaPredicted RBP18.51■□□□□ 0.55
NXF1-214ENST00000533048 SUCLG2Q96I99 432 aa18.51■□□□□ 0.55
NXF1-214ENST00000533048 PLA2G12BQ9BX93 195 aa18.51■□□□□ 0.55
NXF1-214ENST00000533048 DDX60Q8IY21 1712 aaKnown RBP18.5■□□□□ 0.55
NXF1-214ENST00000533048 NTSR2O95665 410 aa18.5■□□□□ 0.55
NXF1-214ENST00000533048 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
NXF1-214ENST00000533048 CENPQQ7L2Z9 268 aaPredicted RBP18.5■□□□□ 0.55
NXF1-214ENST00000533048 RWDD1Q9H446 243 aaPredicted RBP18.5■□□□□ 0.55
NXF1-214ENST00000533048 IGHDP01880 384 aa18.49■□□□□ 0.55
NXF1-214ENST00000533048 ATP8B2P98198 1209 aa18.49■□□□□ 0.55
NXF1-214ENST00000533048 PPP1R42Q7Z4L9 355 aa18.49■□□□□ 0.55
NXF1-214ENST00000533048 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
NXF1-214ENST00000533048 CARMIL3Q8ND23 1372 aa18.49■□□□□ 0.55
NXF1-214ENST00000533048 SH3TC1Q8TE82 1336 aa18.49■□□□□ 0.55
NXF1-214ENST00000533048 SSH3Q8TE77 659 aa18.48■□□□□ 0.55
NXF1-214ENST00000533048 BICC1Q9H694 974 aaKnown RBP18.48■□□□□ 0.55
NXF1-214ENST00000533048 TRMT112Q9UI30 125 aaKnown RBP18.48■□□□□ 0.55
NXF1-214ENST00000533048 NRXN2Q9P2S2 1712 aa18.48■□□□□ 0.55
NXF1-214ENST00000533048 HMMRO75330 724 aa18.47■□□□□ 0.55
NXF1-214ENST00000533048 FOXO4P98177 505 aa18.47■□□□□ 0.55
NXF1-214ENST00000533048 POLA2Q14181 598 aa18.47■□□□□ 0.55
NXF1-214ENST00000533048 NFIXQ14938 502 aa18.47■□□□□ 0.55
NXF1-214ENST00000533048 FAM89AQ96GI7 184 aa18.47■□□□□ 0.55
NXF1-214ENST00000533048 SETDB2Q96T68 719 aa18.47■□□□□ 0.55
NXF1-214ENST00000533048 RIC1Q4ADV7 1423 aa18.47■□□□□ 0.55
NXF1-214ENST00000533048 PNMA6EA0A0J9YXQ4 647 aa18.46■□□□□ 0.55
NXF1-214ENST00000533048 TM4SF1P30408 202 aa18.46■□□□□ 0.55
NXF1-214ENST00000533048 EPHA10Q5JZY3 1008 aa18.46■□□□□ 0.55
NXF1-214ENST00000533048 SMC5Q8IY18 1101 aa18.46■□□□□ 0.55
NXF1-214ENST00000533048 NYXQ9GZU5 481 aa18.46■□□□□ 0.55
NXF1-214ENST00000533048 HSP90B1P14625 803 aaKnown RBP18.45■□□□□ 0.54
NXF1-214ENST00000533048 NLGN1Q8N2Q7 840 aa18.45■□□□□ 0.54
NXF1-214ENST00000533048 JARID2Q92833 1246 aaPredicted RBP18.45■□□□□ 0.54
NXF1-214ENST00000533048 CASZ1Q86V15 1759 aa18.45■□□□□ 0.54
NXF1-214ENST00000533048 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
NXF1-214ENST00000533048 SLC10A5Q5PT55 438 aa18.44■□□□□ 0.54
NXF1-214ENST00000533048 GCC1Q96CN9 775 aa18.44■□□□□ 0.54
NXF1-214ENST00000533048 DCTPP1Q9H773 170 aa18.44■□□□□ 0.54
NXF1-214ENST00000533048 SRGAP3O43295 1099 aa18.43■□□□□ 0.54
NXF1-214ENST00000533048 PDE8AO60658 829 aa18.43■□□□□ 0.54
NXF1-214ENST00000533048 CSF1RP07333 972 aa18.43■□□□□ 0.54
NXF1-214ENST00000533048 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
NXF1-214ENST00000533048 SYNE4Q8N205 404 aa18.43■□□□□ 0.54
NXF1-214ENST00000533048 RTL9Q8NET4 1388 aa18.42■□□□□ 0.54
NXF1-214ENST00000533048 ABCC12Q96J65 1359 aa18.42■□□□□ 0.54
NXF1-214ENST00000533048 CTSWP56202 376 aa18.42■□□□□ 0.54
NXF1-214ENST00000533048 TPTE2Q6XPS3 522 aa18.42■□□□□ 0.54
NXF1-214ENST00000533048 BICDL1Q6ZP65 573 aa18.42■□□□□ 0.54
NXF1-214ENST00000533048 ILDR2Q71H61 639 aa18.42■□□□□ 0.54
NXF1-214ENST00000533048 NBPF5PQ86XG9 351 aaPredicted RBP18.42■□□□□ 0.54
NXF1-214ENST00000533048 LRP5O75197 1615 aa18.41■□□□□ 0.54
NXF1-214ENST00000533048 POLRMTO00411 1230 aaKnown RBP18.41■□□□□ 0.54
NXF1-214ENST00000533048 DDR1Q08345 913 aa18.41■□□□□ 0.54
NXF1-214ENST00000533048 LMBR1LQ6UX01 489 aa18.41■□□□□ 0.54
NXF1-214ENST00000533048 NOP58Q9Y2X3 529 aaKnown RBP18.41■□□□□ 0.54
NXF1-214ENST00000533048 RFX5P48382 616 aaPredicted RBP18.4■□□□□ 0.54
NXF1-214ENST00000533048 ERFEQ4G0M1 354 aa18.4■□□□□ 0.54
NXF1-214ENST00000533048 NUTM1Q86Y26 1132 aa18.4■□□□□ 0.54
NXF1-214ENST00000533048 TTLL11Q8NHH1 800 aa18.4■□□□□ 0.54
NXF1-214ENST00000533048 SLC16A10Q8TF71 515 aa18.4■□□□□ 0.54
NXF1-214ENST00000533048 TNRC6CQ9HCJ0 1690 aaKnown RBP18.4■□□□□ 0.54
NXF1-214ENST00000533048 FAM177BA6PVY3 158 aa18.39■□□□□ 0.53
NXF1-214ENST00000533048 MSH5O43196 834 aa18.39■□□□□ 0.53
NXF1-214ENST00000533048 COPRSQ9NQ92 184 aa18.39■□□□□ 0.53
NXF1-214ENST00000533048 SERPINB2P05120 415 aa18.38■□□□□ 0.53
NXF1-214ENST00000533048 HCLS1P14317 486 aaPredicted RBP18.38■□□□□ 0.53
NXF1-214ENST00000533048 SF3B3Q15393 1217 aaKnown RBP18.38■□□□□ 0.53
NXF1-214ENST00000533048 PRR5LQ6MZQ0 368 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms