RNA–Protein interactions for RNA: ENST00000532956.5

SIRT3-215, Transcript of sirtuin 3, humanhuman

TSL 2 BASIC

Gene SIRT3, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRT3-215ENST00000532956 ELL2O00472 640 aaPredicted RBP28.4■■■□□ 2.14
SIRT3-215ENST00000532956 TCIRG1Q13488 830 aa28.4■■■□□ 2.14
SIRT3-215ENST00000532956 OLFM4Q6UX06 510 aa28.4■■■□□ 2.14
SIRT3-215ENST00000532956 HYPKQ9NX55 129 aa28.4■■■□□ 2.14
SIRT3-215ENST00000532956 RIC1Q4ADV7 1423 aa28.4■■■□□ 2.14
SIRT3-215ENST00000532956 FER1L6Q2WGJ9 1857 aa28.4■■■□□ 2.14
SIRT3-215ENST00000532956 GLTPD2A6NH11 291 aa28.39■■■□□ 2.14
SIRT3-215ENST00000532956 NLRP10Q86W26 655 aa28.39■■■□□ 2.14
SIRT3-215ENST00000532956 C16orf71Q8IYS4 520 aaPredicted RBP28.39■■■□□ 2.14
SIRT3-215ENST00000532956 PLBD2Q8NHP8 589 aa28.39■■■□□ 2.14
SIRT3-215ENST00000532956 CCDC27Q2M243 656 aa28.38■■■□□ 2.13
SIRT3-215ENST00000532956 ANKRD13DQ6ZTN6 518 aa28.38■■■□□ 2.13
SIRT3-215ENST00000532956 HOXA10P31260 410 aaPredicted RBP28.37■■■□□ 2.13
SIRT3-215ENST00000532956 C3orf67Q6ZVT6 689 aa28.37■■■□□ 2.13
SIRT3-215ENST00000532956 C8orf58Q8NAV2 365 aa28.37■■■□□ 2.13
SIRT3-215ENST00000532956 NLRP3Q96P20 1036 aa28.37■■■□□ 2.13
SIRT3-215ENST00000532956 HSPA6P17066 643 aa28.36■■■□□ 2.13
SIRT3-215ENST00000532956 SLC10A5Q5PT55 438 aa28.36■■■□□ 2.13
SIRT3-215ENST00000532956 WWC1Q8IX03 1113 aa28.36■■■□□ 2.13
SIRT3-215ENST00000532956 RTKN2Q8IZC4 609 aa28.36■■■□□ 2.13
SIRT3-215ENST00000532956 RBM17Q96I25 401 aaKnown RBP28.36■■■□□ 2.13
SIRT3-215ENST00000532956 FKBP4Q02790 459 aaKnown RBP eCLIP28.35■■■□□ 2.13
SIRT3-215ENST00000532956 DPY19L2Q6NUT2 758 aa28.35■■■□□ 2.13
SIRT3-215ENST00000532956 RNF123Q5XPI4 1314 aa28.35■■■□□ 2.13
SIRT3-215ENST00000532956 CCDC88AQ3V6T2 1871 aa28.34■■■□□ 2.13
SIRT3-215ENST00000532956 CRAMP1Q96RY5 1269 aa28.34■■■□□ 2.13
SIRT3-215ENST00000532956 TRMT112Q9UI30 125 aaKnown RBP28.34■■■□□ 2.13
SIRT3-215ENST00000532956 TIAM2Q8IVF5 1701 aa28.34■■■□□ 2.13
SIRT3-215ENST00000532956 SYNE4Q8N205 404 aa28.33■■■□□ 2.13
SIRT3-215ENST00000532956 RBM46Q8TBY0 533 aaKnown RBP28.33■■■□□ 2.13
SIRT3-215ENST00000532956 TSR2Q969E8 191 aaKnown RBP28.33■■■□□ 2.13
SIRT3-215ENST00000532956 ZNF428Q96B54 188 aa28.33■■■□□ 2.13
SIRT3-215ENST00000532956 ZNF277Q9NRM2 450 aaPredicted RBP28.33■■■□□ 2.13
SIRT3-215ENST00000532956 HCLS1P14317 486 aaPredicted RBP28.32■■■□□ 2.12
SIRT3-215ENST00000532956 CEP350Q5VT06 3117 aa28.31■■■□□ 2.12
SIRT3-215ENST00000532956 TSPYL6Q8N831 410 aa28.31■■■□□ 2.12
SIRT3-215ENST00000532956 ISCA1Q9BUE6 129 aa28.31■■■□□ 2.12
SIRT3-215ENST00000532956 PHAXQ9H814 394 aaKnown RBP28.31■■■□□ 2.12
SIRT3-215ENST00000532956 SH3TC1Q8TE82 1336 aa28.31■■■□□ 2.12
SIRT3-215ENST00000532956 ANKRD36CQ5JPF3 1778 aa28.3■■■□□ 2.12
SIRT3-215ENST00000532956 ATP5J2-PTCD1G3V325 749 aa28.3■■■□□ 2.12
SIRT3-215ENST00000532956 VEGFAP15692 232 aaPredicted RBP28.3■■■□□ 2.12
SIRT3-215ENST00000532956 NCBP3Q53F19 620 aaKnown RBP28.3■■■□□ 2.12
SIRT3-215ENST00000532956 CC2D2BQ6DHV5 1058 aa28.3■■■□□ 2.12
SIRT3-215ENST00000532956 PPEF1O14829 653 aaPredicted RBP28.29■■■□□ 2.12
SIRT3-215ENST00000532956 GOLGA2Q08379 1002 aa28.29■■■□□ 2.12
SIRT3-215ENST00000532956 CCDC30Q5VVM6 783 aa28.29■■■□□ 2.12
SIRT3-215ENST00000532956 RIC3Q7Z5B4 369 aa28.29■■■□□ 2.12
SIRT3-215ENST00000532956 CHMP4AQ9BY43 222 aa28.29■■■□□ 2.12
SIRT3-215ENST00000532956 SALL2Q9Y467 1007 aaPredicted RBP28.29■■■□□ 2.12
SIRT3-215ENST00000532956 TCERG1O14776 1098 aaKnown RBP28.28■■■□□ 2.12
SIRT3-215ENST00000532956 IL16Q14005 1332 aa28.27■■■□□ 2.12
SIRT3-215ENST00000532956 PSMD1Q99460 953 aa28.27■■■□□ 2.12
SIRT3-215ENST00000532956 DICER1Q9UPY3 1922 aaKnown RBP28.27■■■□□ 2.12
SIRT3-215ENST00000532956 SNED1Q8TER0 1413 aa28.26■■■□□ 2.12
SIRT3-215ENST00000532956 IARSP41252 1262 aaKnown RBP28.26■■■□□ 2.11
SIRT3-215ENST00000532956 SLC51AQ86UW1 340 aa28.26■■■□□ 2.11
SIRT3-215ENST00000532956 POTECB2RU33 542 aa28.25■■■□□ 2.11
SIRT3-215ENST00000532956 DDNO94850 711 aaPredicted RBP28.25■■■□□ 2.11
SIRT3-215ENST00000532956 FSTL1Q12841 308 aa28.25■■■□□ 2.11
SIRT3-215ENST00000532956 FAM9BQ8IZU0 186 aa28.25■■■□□ 2.11
SIRT3-215ENST00000532956 ABCC4O15439 1325 aa28.24■■■□□ 2.11
SIRT3-215ENST00000532956 TRIM28Q13263 835 aaKnown RBP28.24■■■□□ 2.11
SIRT3-215ENST00000532956 GRIPAP1Q4V328 841 aa28.24■■■□□ 2.11
SIRT3-215ENST00000532956 FAM89AQ96GI7 184 aa28.24■■■□□ 2.11
SIRT3-215ENST00000532956 TMX4Q9H1E5 349 aaPredicted RBP28.24■■■□□ 2.11
SIRT3-215ENST00000532956 APLP1P51693 650 aa28.22■■■□□ 2.11
SIRT3-215ENST00000532956 TWISTNBQ3B726 338 aaPredicted RBP28.22■■■□□ 2.11
SIRT3-215ENST00000532956 DDX46Q7L014 1031 aaKnown RBP28.22■■■□□ 2.11
SIRT3-215ENST00000532956 SMC1BQ8NDV3 1235 aa28.22■■■□□ 2.11
SIRT3-215ENST00000532956 ATP6V0A2Q9Y487 856 aa28.22■■■□□ 2.11
SIRT3-215ENST00000532956 WDR90Q96KV7 1748 aa28.21■■■□□ 2.11
SIRT3-215ENST00000532956 DDX58O95786 925 aaKnown RBP28.21■■■□□ 2.11
SIRT3-215ENST00000532956 RTL5Q5HYW3 569 aaPredicted RBP28.21■■■□□ 2.11
SIRT3-215ENST00000532956 MYD88Q99836 296 aa28.21■■■□□ 2.11
SIRT3-215ENST00000532956 BBOX1O75936 387 aa28.2■■■□□ 2.1
SIRT3-215ENST00000532956 WDR63Q8IWG1 891 aa28.2■■■□□ 2.1
SIRT3-215ENST00000532956 JDP2Q8WYK2 163 aa28.2■■■□□ 2.1
SIRT3-215ENST00000532956 STK31Q9BXU1 1019 aa28.2■■■□□ 2.1
SIRT3-215ENST00000532956 ZNF541Q9H0D2 1346 aa28.19■■■□□ 2.1
SIRT3-215ENST00000532956 GRAPQ13588 217 aa28.19■■■□□ 2.1
SIRT3-215ENST00000532956 GRAPLQ8TC17 118 aaPredicted RBP28.19■■■□□ 2.1
SIRT3-215ENST00000532956 FANCIQ9NVI1 1328 aa28.18■■■□□ 2.1
SIRT3-215ENST00000532956 FZD9O00144 591 aa28.17■■■□□ 2.1
SIRT3-215ENST00000532956 IRS4O14654 1257 aaPredicted RBP28.17■■■□□ 2.1
SIRT3-215ENST00000532956 SP8Q8IXZ3 490 aa28.17■■■□□ 2.1
SIRT3-215ENST00000532956 METTL22Q9BUU2 404 aaPredicted RBP28.17■■■□□ 2.1
SIRT3-215ENST00000532956 SF3B3Q15393 1217 aaKnown RBP28.16■■■□□ 2.1
SIRT3-215ENST00000532956 LARGE2Q8N3Y3 721 aa28.16■■■□□ 2.1
SIRT3-215ENST00000532956 ZBTB38Q8NAP3 1195 aaPredicted RBP28.16■■■□□ 2.1
SIRT3-215ENST00000532956 CCDC191Q8NCU4 936 aa28.16■■■□□ 2.1
SIRT3-215ENST00000532956 MAP3K2Q9Y2U5 619 aa28.16■■■□□ 2.1
SIRT3-215ENST00000532956 LAMB2P55268 1798 aa28.15■■■□□ 2.1
SIRT3-215ENST00000532956 L3MBTL3Q96JM7 780 aaPredicted RBP28.15■■■□□ 2.1
SIRT3-215ENST00000532956 IQCA1LA6NCM1 817 aa28.14■■■□□ 2.1
SIRT3-215ENST00000532956 SLC4A2P04920 1241 aa28.14■■■□□ 2.1
SIRT3-215ENST00000532956 KSR2Q6VAB6 950 aa28.14■■■□□ 2.1
SIRT3-215ENST00000532956 CWC25Q9NXE8 425 aaPredicted RBP28.14■■■□□ 2.1
SIRT3-215ENST00000532956 PI4KAP2A4QPH2 592 aa28.13■■■□□ 2.09
SIRT3-215ENST00000532956 PI4KAP1Q8N8J0 262 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms