RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 RAB11FIP3O75154 756 aa17.69■□□□□ 0.42
NXF1-213ENST00000532297 CCDC192P0DO97 292 aa17.69■□□□□ 0.42
NXF1-213ENST00000532297 SMC3Q9UQE7 1217 aa17.69■□□□□ 0.42
NXF1-213ENST00000532297 TAF6LQ9Y6J9 622 aa17.69■□□□□ 0.42
NXF1-213ENST00000532297 PSME1Q06323 249 aa17.68■□□□□ 0.42
NXF1-213ENST00000532297 TAF3Q5VWG9 929 aa17.68■□□□□ 0.42
NXF1-213ENST00000532297 NECAB1Q8N987 351 aa17.68■□□□□ 0.42
NXF1-213ENST00000532297 C16orf45Q96MC5 204 aaPredicted RBP17.68■□□□□ 0.42
NXF1-213ENST00000532297 TTC14Q96N46 770 aa17.68■□□□□ 0.42
NXF1-213ENST00000532297 ORAI2Q96SN7 254 aa17.68■□□□□ 0.42
NXF1-213ENST00000532297 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.68■□□□□ 0.42
NXF1-213ENST00000532297 DNM1Q05193 864 aaKnown RBP17.68■□□□□ 0.42
NXF1-213ENST00000532297 CNTROBQ8N137 903 aa17.68■□□□□ 0.42
NXF1-213ENST00000532297 FAM227BQ96M60 508 aa17.68■□□□□ 0.42
NXF1-213ENST00000532297 CCDC8Q9H0W5 538 aaPredicted RBP17.68■□□□□ 0.42
NXF1-213ENST00000532297 CGNQ9P2M7 1197 aaKnown RBP17.68■□□□□ 0.42
NXF1-213ENST00000532297 NFAT5O94916 1531 aa17.68■□□□□ 0.42
NXF1-213ENST00000532297 C9orf78Q9NZ63 289 aaPredicted RBP17.68■□□□□ 0.42
NXF1-213ENST00000532297 NDUFB9Q9Y6M9 179 aa17.68■□□□□ 0.42
NXF1-213ENST00000532297 CHGBP05060 677 aa17.67■□□□□ 0.42
NXF1-213ENST00000532297 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
NXF1-213ENST00000532297 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
NXF1-213ENST00000532297 CTNNA3Q9UI47 895 aa17.67■□□□□ 0.42
NXF1-213ENST00000532297 EDC3Q96F86 508 aaKnown RBP17.67■□□□□ 0.42
NXF1-213ENST00000532297 EPB41L2O43491 1005 aaKnown RBP17.66■□□□□ 0.42
NXF1-213ENST00000532297 ST3GAL1Q11201 340 aa17.66■□□□□ 0.42
NXF1-213ENST00000532297 AACSQ86V21 672 aa17.66■□□□□ 0.42
NXF1-213ENST00000532297 LIMCH1Q9UPQ0 1083 aa17.66■□□□□ 0.42
NXF1-213ENST00000532297 AXIN2Q9Y2T1 843 aa17.66■□□□□ 0.42
NXF1-213ENST00000532297 MED1Q15648 1581 aaPredicted RBP17.66■□□□□ 0.42
NXF1-213ENST00000532297 SMTNL1A8MU46 457 aa17.66■□□□□ 0.42
NXF1-213ENST00000532297 KLHL34Q8N239 644 aa17.66■□□□□ 0.42
NXF1-213ENST00000532297 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
NXF1-213ENST00000532297 ANKARQ7Z5J8 1434 aa17.66■□□□□ 0.42
NXF1-213ENST00000532297 SYCP1Q15431 976 aa17.65■□□□□ 0.42
NXF1-213ENST00000532297 FAM173BQ6P4H8 233 aa17.65■□□□□ 0.42
NXF1-213ENST00000532297 CCDC186Q7Z3E2 898 aa17.65■□□□□ 0.42
NXF1-213ENST00000532297 DRC7Q8IY82 874 aa17.65■□□□□ 0.42
NXF1-213ENST00000532297 CHMP3Q9Y3E7 222 aa17.65■□□□□ 0.42
NXF1-213ENST00000532297 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
NXF1-213ENST00000532297 GABPB1Q06547 395 aaPredicted RBP17.65■□□□□ 0.42
NXF1-213ENST00000532297 LRMPQ12912 555 aa17.65■□□□□ 0.42
NXF1-213ENST00000532297 NAA30Q147X3 362 aaPredicted RBP17.65■□□□□ 0.42
NXF1-213ENST00000532297 FAM200AQ8TCP9 573 aa17.65■□□□□ 0.42
NXF1-213ENST00000532297 RNMTO43148 476 aaKnown RBP17.64■□□□□ 0.41
NXF1-213ENST00000532297 MYL6BP14649 208 aa17.64■□□□□ 0.41
NXF1-213ENST00000532297 LUZP1Q86V48 1076 aa17.64■□□□□ 0.41
NXF1-213ENST00000532297 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
NXF1-213ENST00000532297 CCDC9Q9Y3X0 531 aaKnown RBP17.64■□□□□ 0.41
NXF1-213ENST00000532297 TNNT1P13805 278 aa17.64■□□□□ 0.41
NXF1-213ENST00000532297 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
NXF1-213ENST00000532297 DDX41Q9UJV9 622 aaKnown RBP17.63■□□□□ 0.41
NXF1-213ENST00000532297 GJB2P29033 226 aa17.63■□□□□ 0.41
NXF1-213ENST00000532297 FERMT3Q86UX7 667 aa17.63■□□□□ 0.41
NXF1-213ENST00000532297 VPS37CA5D8V6 355 aaPredicted RBP17.62■□□□□ 0.41
NXF1-213ENST00000532297 IFIT2P09913 472 aaKnown RBP17.62■□□□□ 0.41
NXF1-213ENST00000532297 CAMK4Q16566 473 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 CCDC112Q8NEF3 446 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 GIGYF1O75420 1035 aaPredicted RBP17.62■□□□□ 0.41
NXF1-213ENST00000532297 SASH1O94885 1247 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
NXF1-213ENST00000532297 EAF2Q96CJ1 260 aaPredicted RBP17.62■□□□□ 0.41
NXF1-213ENST00000532297 BOLA2Q9H3K6 86 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 HYPKQ9NX55 129 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 NRBP1Q9UHY1 535 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 MTMR6Q9Y217 621 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 NMIQ13287 307 aaPredicted RBP17.62■□□□□ 0.41
NXF1-213ENST00000532297 MAP3K11Q16584 847 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 AKAP4Q5JQC9 854 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 ANKRD24Q8TF21 1146 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 BCL11BQ9C0K0 894 aaPredicted RBP17.62■□□□□ 0.41
NXF1-213ENST00000532297 MRVI1Q9Y6F6 885 aa17.62■□□□□ 0.41
NXF1-213ENST00000532297 CRYBG1Q9Y4K1 1723 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 TYRO3Q06418 890 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 C1orf141Q5JVX7 400 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 PAXBP1Q9Y5B6 917 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 RGPD5Q99666 1765 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 A0A0D9SFI3 127 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 GLRX3O76003 335 aaKnown RBP17.61■□□□□ 0.41
NXF1-213ENST00000532297 SLFN14P0C7P3 912 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 ME3Q16798 604 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 HSP90AB4PQ58FF6 505 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 DDX17Q92841 729 aaKnown RBP17.61■□□□□ 0.41
NXF1-213ENST00000532297 NUP62CLQ9H1M0 184 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 ECHDC1Q9NTX5 307 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 PDRG1Q9NUG6 133 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 DBF4Q9UBU7 674 aaPredicted RBP17.61■□□□□ 0.41
NXF1-213ENST00000532297 LMO7Q8WWI1 1683 aa17.61■□□□□ 0.41
NXF1-213ENST00000532297 GCP02774 474 aa17.6■□□□□ 0.41
NXF1-213ENST00000532297 ZC3H6P61129 1189 aaKnown RBP17.6■□□□□ 0.41
NXF1-213ENST00000532297 TMEM51Q9NW97 253 aa17.6■□□□□ 0.41
NXF1-213ENST00000532297 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
NXF1-213ENST00000532297 ZSCAN25Q6NSZ9 544 aa17.6■□□□□ 0.41
NXF1-213ENST00000532297 TRIM5Q9C035 493 aa17.6■□□□□ 0.41
NXF1-213ENST00000532297 RBM8AQ9Y5S9 174 aaKnown RBP17.6■□□□□ 0.41
NXF1-213ENST00000532297 MORC2Q9Y6X9 1032 aaPredicted RBP17.6■□□□□ 0.41
NXF1-213ENST00000532297 USP54Q70EL1 1684 aa17.6■□□□□ 0.41
NXF1-213ENST00000532297 KCNJ4P48050 445 aa17.59■□□□□ 0.41
NXF1-213ENST00000532297 STK3Q13188 491 aa17.59■□□□□ 0.41
NXF1-213ENST00000532297 TPD52L1Q16890 204 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms