RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 GRIPAP1Q4V328 841 aa26.35■■□□□ 1.81
PTP4A2-214ENST00000532289 POLR3GLQ9BT43 218 aa26.35■■□□□ 1.81
PTP4A2-214ENST00000532289 PIP4K2AP48426 406 aaPredicted RBP26.34■■□□□ 1.81
PTP4A2-214ENST00000532289 TEFQ10587 303 aa26.34■■□□□ 1.81
PTP4A2-214ENST00000532289 IL17REQ8NFR9 667 aa26.34■■□□□ 1.81
PTP4A2-214ENST00000532289 GCC1Q96CN9 775 aa26.34■■□□□ 1.81
PTP4A2-214ENST00000532289 PANK3Q9H999 370 aa26.34■■□□□ 1.81
PTP4A2-214ENST00000532289 AKAP11Q9UKA4 1901 aa26.33■■□□□ 1.81
PTP4A2-214ENST00000532289 FAM177BA6PVY3 158 aa26.33■■□□□ 1.81
PTP4A2-214ENST00000532289 RGL2O15211 777 aa26.33■■□□□ 1.81
PTP4A2-214ENST00000532289 NIM1KQ8IY84 436 aa26.33■■□□□ 1.81
PTP4A2-214ENST00000532289 FAM155AB1AL88 458 aaPredicted RBP26.32■■□□□ 1.8
PTP4A2-214ENST00000532289 ZC3H15Q8WU90 426 aaKnown RBP26.32■■□□□ 1.8
PTP4A2-214ENST00000532289 USP16Q9Y5T5 823 aa26.32■■□□□ 1.8
PTP4A2-214ENST00000532289 HUNKP57058 714 aa26.31■■□□□ 1.8
PTP4A2-214ENST00000532289 CDC37L1Q7L3B6 337 aa26.31■■□□□ 1.8
PTP4A2-214ENST00000532289 HIRAP54198 1017 aaPredicted RBP26.3■■□□□ 1.8
PTP4A2-214ENST00000532289 CTU1Q7Z7A3 348 aaKnown RBP26.3■■□□□ 1.8
PTP4A2-214ENST00000532289 NBPF15Q8N660 670 aa26.3■■□□□ 1.8
PTP4A2-214ENST00000532289 RNF186Q9NXI6 227 aa26.3■■□□□ 1.8
PTP4A2-214ENST00000532289 NPC1L1Q9UHC9 1359 aa26.3■■□□□ 1.8
PTP4A2-214ENST00000532289 KCNQ3O43525 872 aa26.28■■□□□ 1.8
PTP4A2-214ENST00000532289 TRPA1O75762 1119 aa26.28■■□□□ 1.8
PTP4A2-214ENST00000532289 GTF2E1P29083 439 aaPredicted RBP26.28■■□□□ 1.8
PTP4A2-214ENST00000532289 HOXA10P31260 410 aaPredicted RBP26.28■■□□□ 1.8
PTP4A2-214ENST00000532289 GMPSP49915 693 aaPredicted RBP26.28■■□□□ 1.8
PTP4A2-214ENST00000532289 CXCL9Q07325 125 aa26.28■■□□□ 1.8
PTP4A2-214ENST00000532289 SLC51AQ86UW1 340 aa26.28■■□□□ 1.8
PTP4A2-214ENST00000532289 KIF23Q02241 960 aaPredicted RBP26.27■■□□□ 1.8
PTP4A2-214ENST00000532289 RGMBQ6NW40 437 aa26.27■■□□□ 1.8
PTP4A2-214ENST00000532289 HPS5Q9UPZ3 1129 aa26.27■■□□□ 1.8
PTP4A2-214ENST00000532289 ABCC12Q96J65 1359 aa26.27■■□□□ 1.8
PTP4A2-214ENST00000532289 GNAT3A8MTJ3 354 aa26.26■■□□□ 1.79
PTP4A2-214ENST00000532289 PPIP5K2O43314 1243 aa26.26■■□□□ 1.79
PTP4A2-214ENST00000532289 KIF7Q2M1P5 1343 aa26.25■■□□□ 1.79
PTP4A2-214ENST00000532289 CDHR2Q9BYE9 1310 aa26.25■■□□□ 1.79
PTP4A2-214ENST00000532289 AOC3Q16853 763 aa26.25■■□□□ 1.79
PTP4A2-214ENST00000532289 HABP4Q5JVS0 413 aaKnown RBP26.25■■□□□ 1.79
PTP4A2-214ENST00000532289 VPS33BQ9H267 617 aa26.25■■□□□ 1.79
PTP4A2-214ENST00000532289 ZNRF3Q9ULT6 936 aa26.25■■□□□ 1.79
PTP4A2-214ENST00000532289 RIC1Q4ADV7 1423 aa26.24■■□□□ 1.79
PTP4A2-214ENST00000532289 PRAMEF22A3QJZ6 481 aa26.24■■□□□ 1.79
PTP4A2-214ENST00000532289 HLFQ16534 295 aa26.24■■□□□ 1.79
PTP4A2-214ENST00000532289 RPGRQ92834 1020 aaKnown RBP26.24■■□□□ 1.79
PTP4A2-214ENST00000532289 CCDC102AQ96A19 550 aa26.24■■□□□ 1.79
PTP4A2-214ENST00000532289 USP48Q86UV5 1035 aa26.23■■□□□ 1.79
PTP4A2-214ENST00000532289 TRPM4Q8TD43 1214 aa26.23■■□□□ 1.79
PTP4A2-214ENST00000532289 NBPF26B4DH59 902 aa26.22■■□□□ 1.79
PTP4A2-214ENST00000532289 PPEF1O14829 653 aaPredicted RBP26.22■■□□□ 1.79
PTP4A2-214ENST00000532289 NBPF10Q6P3W6 841 aaKnown RBP26.22■■□□□ 1.79
PTP4A2-214ENST00000532289 DLK2Q6UY11 383 aa26.22■■□□□ 1.79
PTP4A2-214ENST00000532289 NUTM1Q86Y26 1132 aa26.22■■□□□ 1.79
PTP4A2-214ENST00000532289 CEMIPQ8WUJ3 1361 aa26.21■■□□□ 1.79
PTP4A2-214ENST00000532289 BTBD11A6QL63 1104 aa26.21■■□□□ 1.79
PTP4A2-214ENST00000532289 CRAMP1Q96RY5 1269 aa26.21■■□□□ 1.79
PTP4A2-214ENST00000532289 NYXQ9GZU5 481 aa26.21■■□□□ 1.79
PTP4A2-214ENST00000532289 TCERG1O14776 1098 aaKnown RBP26.2■■□□□ 1.78
PTP4A2-214ENST00000532289 POLR2AP24928 1970 aaKnown RBP26.2■■□□□ 1.78
PTP4A2-214ENST00000532289 CSRNP1Q96S65 589 aa26.19■■□□□ 1.78
PTP4A2-214ENST00000532289 BCL2L13Q9BXK5 485 aa26.19■■□□□ 1.78
PTP4A2-214ENST00000532289 NUP98P52948 1817 aa26.18■■□□□ 1.78
PTP4A2-214ENST00000532289 SNRPA1P09661 255 aaKnown RBP26.18■■□□□ 1.78
PTP4A2-214ENST00000532289 ZNF157P51786 506 aaPredicted RBP26.18■■□□□ 1.78
PTP4A2-214ENST00000532289 PKN2Q16513 984 aaKnown RBP26.18■■□□□ 1.78
PTP4A2-214ENST00000532289 GAS2L2Q8NHY3 880 aa26.18■■□□□ 1.78
PTP4A2-214ENST00000532289 RBM17Q96I25 401 aaKnown RBP26.18■■□□□ 1.78
PTP4A2-214ENST00000532289 GBA2Q9HCG7 927 aaPredicted RBP26.18■■□□□ 1.78
PTP4A2-214ENST00000532289 DIAPH1O60610 1272 aaKnown RBP26.17■■□□□ 1.78
PTP4A2-214ENST00000532289 C2orf69Q8N8R5 385 aa26.16■■□□□ 1.78
PTP4A2-214ENST00000532289 RTFDC1Q9BY42 306 aaPredicted RBP26.16■■□□□ 1.78
PTP4A2-214ENST00000532289 CNOT7Q9UIV1 285 aaKnown RBP26.16■■□□□ 1.78
PTP4A2-214ENST00000532289 MKI67P46013 3256 aaKnown RBP26.15■■□□□ 1.78
PTP4A2-214ENST00000532289 SHTN1A0MZ66 631 aa26.15■■□□□ 1.78
PTP4A2-214ENST00000532289 TNIP1Q15025 636 aa26.15■■□□□ 1.78
PTP4A2-214ENST00000532289 SLC10A3P09131 477 aa26.14■■□□□ 1.78
PTP4A2-214ENST00000532289 SUPT20HQ8NEM7 779 aa26.14■■□□□ 1.78
PTP4A2-214ENST00000532289 KNSTRNQ9Y448 316 aa26.14■■□□□ 1.78
PTP4A2-214ENST00000532289 ATP6V0A2Q9Y487 856 aa26.14■■□□□ 1.78
PTP4A2-214ENST00000532289 H7C1D1 291 aa26.13■■□□□ 1.77
PTP4A2-214ENST00000532289 RAD17O75943 681 aa26.13■■□□□ 1.77
PTP4A2-214ENST00000532289 IBTKQ9P2D0 1353 aaPredicted RBP26.12■■□□□ 1.77
PTP4A2-214ENST00000532289 KRT26Q7Z3Y9 468 aa26.12■■□□□ 1.77
PTP4A2-214ENST00000532289 REM2Q8IYK8 340 aaPredicted RBP26.11■■□□□ 1.77
PTP4A2-214ENST00000532289 TMX4Q9H1E5 349 aaPredicted RBP26.11■■□□□ 1.77
PTP4A2-214ENST00000532289 KIAA2012Q0VF49 1180 aa26.1■■□□□ 1.77
PTP4A2-214ENST00000532289 C3orf67Q6ZVT6 689 aa26.1■■□□□ 1.77
PTP4A2-214ENST00000532289 MICALL2Q8IY33 904 aa26.1■■□□□ 1.77
PTP4A2-214ENST00000532289 ERVV-1B6SEH8 477 aa26.09■■□□□ 1.77
PTP4A2-214ENST00000532289 FXR1P51114 621 aaKnown RBP eCLIP26.09■■□□□ 1.77
PTP4A2-214ENST00000532289 AMER1Q5JTC6 1135 aaPredicted RBP26.09■■□□□ 1.77
PTP4A2-214ENST00000532289 HDAC9Q9UKV0 1011 aa26.08■■□□□ 1.77
PTP4A2-214ENST00000532289 UBN2Q6ZU65 1347 aa26.08■■□□□ 1.77
PTP4A2-214ENST00000532289 YDJCA8MPS7 323 aa26.07■■□□□ 1.76
PTP4A2-214ENST00000532289 ADM5C9JUS6 153 aa26.07■■□□□ 1.76
PTP4A2-214ENST00000532289 SAMD7Q7Z3H4 446 aa26.07■■□□□ 1.76
PTP4A2-214ENST00000532289 ZNF296Q8WUU4 475 aaPredicted RBP26.07■■□□□ 1.76
PTP4A2-214ENST00000532289 SUSD4Q5VX71 490 aa26.06■■□□□ 1.76
PTP4A2-214ENST00000532289 DPP8Q6V1X1 898 aaPredicted RBP26.06■■□□□ 1.76
PTP4A2-214ENST00000532289 DPF2Q92785 391 aa26.06■■□□□ 1.76
PTP4A2-214ENST00000532289 LAMB4A4D0S4 1761 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms