RNA–Protein interactions for RNA: ENST00000531951.5

PUF60-217, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 973 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-217ENST00000531951 R3HDM1Q15032 1099 aaKnown RBP23.79■■□□□ 1.4
PUF60-217ENST00000531951 NLGN1Q8N2Q7 840 aa23.79■■□□□ 1.4
PUF60-217ENST00000531951 PDGFDQ9GZP0 370 aaPredicted RBP23.79■■□□□ 1.4
PUF60-217ENST00000531951 NFIXQ14938 502 aa23.78■■□□□ 1.4
PUF60-217ENST00000531951 SLC16A10Q8TF71 515 aa23.78■■□□□ 1.4
PUF60-217ENST00000531951 SETDB2Q96T68 719 aa23.78■■□□□ 1.4
PUF60-217ENST00000531951 USP44Q9H0E7 712 aa23.78■■□□□ 1.4
PUF60-217ENST00000531951 CARMIL3Q8ND23 1372 aa23.78■■□□□ 1.4
PUF60-217ENST00000531951 GRM8O00222 908 aa23.77■■□□□ 1.4
PUF60-217ENST00000531951 ZBTB7BO15156 539 aaPredicted RBP23.77■■□□□ 1.4
PUF60-217ENST00000531951 BICDL1Q6ZP65 573 aa23.77■■□□□ 1.4
PUF60-217ENST00000531951 UTYO14607 1347 aa23.77■■□□□ 1.4
PUF60-217ENST00000531951 SOCS7O14512 581 aa23.76■■□□□ 1.39
PUF60-217ENST00000531951 TM4SF1P30408 202 aa23.76■■□□□ 1.39
PUF60-217ENST00000531951 MEIS3Q99687 375 aa23.76■■□□□ 1.39
PUF60-217ENST00000531951 CHMP4BQ9H444 224 aaKnown RBP23.76■■□□□ 1.39
PUF60-217ENST00000531951 C9orf78Q9NZ63 289 aaPredicted RBP23.76■■□□□ 1.39
PUF60-217ENST00000531951 SUSD4Q5VX71 490 aa23.75■■□□□ 1.39
PUF60-217ENST00000531951 PPP1R42Q7Z4L9 355 aa23.75■■□□□ 1.39
PUF60-217ENST00000531951 EXOC6Q8TAG9 804 aa23.75■■□□□ 1.39
PUF60-217ENST00000531951 PCCAP05165 728 aaPredicted RBP23.74■■□□□ 1.39
PUF60-217ENST00000531951 GNAI3P08754 354 aa23.74■■□□□ 1.39
PUF60-217ENST00000531951 UTP14AQ9BVJ6 771 aaKnown RBP23.74■■□□□ 1.39
PUF60-217ENST00000531951 ANKRD31Q8N7Z5 1873 aa23.73■■□□□ 1.39
PUF60-217ENST00000531951 H7C1W4 665 aa23.73■■□□□ 1.39
PUF60-217ENST00000531951 NTSR2O95665 410 aa23.73■■□□□ 1.39
PUF60-217ENST00000531951 NBPF7P0C2Y1 421 aaPredicted RBP23.73■■□□□ 1.39
PUF60-217ENST00000531951 MSL1Q68DK7 614 aa23.73■■□□□ 1.39
PUF60-217ENST00000531951 UBE3BQ7Z3V4 1068 aa23.73■■□□□ 1.39
PUF60-217ENST00000531951 ZBTB38Q8NAP3 1195 aaPredicted RBP23.73■■□□□ 1.39
PUF60-217ENST00000531951 ZBTB40Q9NUA8 1239 aa23.73■■□□□ 1.39
PUF60-217ENST00000531951 TRMT112Q9UI30 125 aaKnown RBP23.73■■□□□ 1.39
PUF60-217ENST00000531951 PSDA5PKW4 1024 aaPredicted RBP23.72■■□□□ 1.39
PUF60-217ENST00000531951 UBTFL1P0CB47 393 aaPredicted RBP23.72■■□□□ 1.39
PUF60-217ENST00000531951 CASP7P55210 303 aa23.72■■□□□ 1.39
PUF60-217ENST00000531951 DDR1Q08345 913 aa23.72■■□□□ 1.39
PUF60-217ENST00000531951 NYXQ9GZU5 481 aa23.72■■□□□ 1.39
PUF60-217ENST00000531951 FAM177BA6PVY3 158 aa23.71■■□□□ 1.39
PUF60-217ENST00000531951 POLRMTO00411 1230 aaKnown RBP23.71■■□□□ 1.39
PUF60-217ENST00000531951 AAMPQ13685 434 aa23.71■■□□□ 1.39
PUF60-217ENST00000531951 NBPF5PQ86XG9 351 aaPredicted RBP23.71■■□□□ 1.39
PUF60-217ENST00000531951 TNRC6CQ9HCJ0 1690 aaKnown RBP23.7■■□□□ 1.39
PUF60-217ENST00000531951 SH3TC1Q8TE82 1336 aa23.7■■□□□ 1.38
PUF60-217ENST00000531951 CDHR2Q9BYE9 1310 aa23.7■■□□□ 1.38
PUF60-217ENST00000531951 MMP10P09238 476 aa23.7■■□□□ 1.38
PUF60-217ENST00000531951 FAM89AQ96GI7 184 aa23.7■■□□□ 1.38
PUF60-217ENST00000531951 KIF13BQ9NQT8 1826 aa23.69■■□□□ 1.38
PUF60-217ENST00000531951 RTL5Q5HYW3 569 aaPredicted RBP23.69■■□□□ 1.38
PUF60-217ENST00000531951 JARID2Q92833 1246 aaPredicted RBP23.69■■□□□ 1.38
PUF60-217ENST00000531951 GNAI2P04899 355 aa23.68■■□□□ 1.38
PUF60-217ENST00000531951 SERPINB2P05120 415 aa23.68■■□□□ 1.38
PUF60-217ENST00000531951 TPTE2Q6XPS3 522 aa23.68■■□□□ 1.38
PUF60-217ENST00000531951 MTFR1LQ9H019 292 aa23.68■■□□□ 1.38
PUF60-217ENST00000531951 HDAC5Q9UQL6 1122 aa23.68■■□□□ 1.38
PUF60-217ENST00000531951 RIC1Q4ADV7 1423 aa23.67■■□□□ 1.38
PUF60-217ENST00000531951 NUTM1Q86Y26 1132 aa23.67■■□□□ 1.38
PUF60-217ENST00000531951 SYNE4Q8N205 404 aa23.67■■□□□ 1.38
PUF60-217ENST00000531951 CNBD1Q8NA66 436 aa23.67■■□□□ 1.38
PUF60-217ENST00000531951 SUCLG2Q96I99 432 aa23.67■■□□□ 1.38
PUF60-217ENST00000531951 PARP3Q9Y6F1 533 aa23.67■■□□□ 1.38
PUF60-217ENST00000531951 ABCC12Q96J65 1359 aa23.66■■□□□ 1.38
PUF60-217ENST00000531951 ZBTB7AO95365 584 aa23.66■■□□□ 1.38
PUF60-217ENST00000531951 ERFEQ4G0M1 354 aa23.66■■□□□ 1.38
PUF60-217ENST00000531951 KAZALD1Q96I82 304 aa23.66■■□□□ 1.38
PUF60-217ENST00000531951 LRRFIP2Q9Y608 721 aaKnown RBP23.66■■□□□ 1.38
PUF60-217ENST00000531951 IRS4O14654 1257 aaPredicted RBP23.65■■□□□ 1.38
PUF60-217ENST00000531951 GTF2E1P29083 439 aaPredicted RBP23.65■■□□□ 1.38
PUF60-217ENST00000531951 ERICH6BQ5W0A0 696 aa23.65■■□□□ 1.38
PUF60-217ENST00000531951 PRR5LQ6MZQ0 368 aa23.65■■□□□ 1.38
PUF60-217ENST00000531951 PLA2G12BQ9BX93 195 aa23.65■■□□□ 1.38
PUF60-217ENST00000531951 C1orf115Q9H7X2 142 aa23.65■■□□□ 1.38
PUF60-217ENST00000531951 SPEF2Q9C093 1822 aa23.63■■□□□ 1.37
PUF60-217ENST00000531951 NPHP1O15259 732 aa23.63■■□□□ 1.37
PUF60-217ENST00000531951 HSP90B1P14625 803 aaKnown RBP23.63■■□□□ 1.37
PUF60-217ENST00000531951 TAF1P21675 1872 aa23.63■■□□□ 1.37
PUF60-217ENST00000531951 SLC10A5Q5PT55 438 aa23.63■■□□□ 1.37
PUF60-217ENST00000531951 BICC1Q9H694 974 aaKnown RBP23.63■■□□□ 1.37
PUF60-217ENST00000531951 COL11A2P13942 1736 aaPredicted RBP23.62■■□□□ 1.37
PUF60-217ENST00000531951 PDE8AO60658 829 aa23.62■■□□□ 1.37
PUF60-217ENST00000531951 ST5P78524 1137 aa23.62■■□□□ 1.37
PUF60-217ENST00000531951 FOXO4P98177 505 aa23.62■■□□□ 1.37
PUF60-217ENST00000531951 EPHA10Q5JZY3 1008 aa23.62■■□□□ 1.37
PUF60-217ENST00000531951 DLEC1Q9Y238 1755 aa23.61■■□□□ 1.37
PUF60-217ENST00000531951 HCLS1P14317 486 aaPredicted RBP23.61■■□□□ 1.37
PUF60-217ENST00000531951 ANKRD44Q8N8A2 993 aa23.61■■□□□ 1.37
PUF60-217ENST00000531951 ATF5Q9Y2D1 282 aaPredicted RBP23.61■■□□□ 1.37
PUF60-217ENST00000531951 RABL6Q3YEC7 729 aaPredicted RBP23.6■■□□□ 1.37
PUF60-217ENST00000531951 CCDC24Q8N4L8 307 aa23.6■■□□□ 1.37
PUF60-217ENST00000531951 PCDHB15Q9Y5E8 787 aa23.6■■□□□ 1.37
PUF60-217ENST00000531951 CACNA1SQ13698 1873 aa23.6■■□□□ 1.37
PUF60-217ENST00000531951 POLD1P28340 1107 aa23.59■■□□□ 1.37
PUF60-217ENST00000531951 CTSWP56202 376 aa23.59■■□□□ 1.37
PUF60-217ENST00000531951 MTX1Q13505 466 aa23.59■■□□□ 1.37
PUF60-217ENST00000531951 CEP85Q6P2H3 762 aa23.59■■□□□ 1.37
PUF60-217ENST00000531951 RPAP2Q8IXW5 612 aaPredicted RBP23.58■■□□□ 1.37
PUF60-217ENST00000531951 SGIP1Q9BQI5 828 aa23.58■■□□□ 1.37
PUF60-217ENST00000531951 C10orf71Q711Q0 1435 aa23.58■■□□□ 1.36
PUF60-217ENST00000531951 KIAA1551Q9HCM1 1747 aa23.57■■□□□ 1.36
PUF60-217ENST00000531951 CSF1RP07333 972 aa23.57■■□□□ 1.36
PUF60-217ENST00000531951 LMBR1LQ6UX01 489 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms