RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 NBPF26B4DH59 902 aa10.51□□□□□ -0.73
NXF1-212ENST00000531872 SNRPA1P09661 255 aaKnown RBP10.51□□□□□ -0.73
NXF1-212ENST00000531872 GRM1Q13255 1194 aa10.51□□□□□ -0.73
NXF1-212ENST00000531872 GRIPAP1Q4V328 841 aa10.51□□□□□ -0.73
NXF1-212ENST00000531872 NBPF10Q6P3W6 841 aaKnown RBP10.51□□□□□ -0.73
NXF1-212ENST00000531872 SAPCD2Q86UD0 394 aa10.51□□□□□ -0.73
NXF1-212ENST00000531872 NBPF15Q8N660 670 aa10.51□□□□□ -0.73
NXF1-212ENST00000531872 HHIPL1Q96JK4 782 aa10.51□□□□□ -0.73
NXF1-212ENST00000531872 FAM177BA6PVY3 158 aa10.5□□□□□ -0.73
NXF1-212ENST00000531872 PER1O15534 1290 aaPredicted RBP10.5□□□□□ -0.73
NXF1-212ENST00000531872 HOXA10P31260 410 aaPredicted RBP10.5□□□□□ -0.73
NXF1-212ENST00000531872 BRPF1P55201 1214 aaPredicted RBP10.5□□□□□ -0.73
NXF1-212ENST00000531872 HLFQ16534 295 aa10.5□□□□□ -0.73
NXF1-212ENST00000531872 LARGE2Q8N3Y3 721 aa10.5□□□□□ -0.73
NXF1-212ENST00000531872 ADARB2Q9NS39 739 aaKnown RBP10.5□□□□□ -0.73
NXF1-212ENST00000531872 CASP8AP2Q9UKL3 1982 aa10.5□□□□□ -0.73
NXF1-212ENST00000531872 ABCC12Q96J65 1359 aa10.5□□□□□ -0.73
NXF1-212ENST00000531872 PDE4DIPQ5VU43 2346 aa10.5□□□□□ -0.73
NXF1-212ENST00000531872 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
NXF1-212ENST00000531872 U2SURPO15042 1029 aaKnown RBP10.49□□□□□ -0.73
NXF1-212ENST00000531872 GTF2E1P29083 439 aaPredicted RBP10.49□□□□□ -0.73
NXF1-212ENST00000531872 PHACTR3Q96KR7 559 aa10.49□□□□□ -0.73
NXF1-212ENST00000531872 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
NXF1-212ENST00000531872 NYXQ9GZU5 481 aa10.49□□□□□ -0.73
NXF1-212ENST00000531872 PGAP2Q9UHJ9 254 aa10.49□□□□□ -0.73
NXF1-212ENST00000531872 KIF7Q2M1P5 1343 aa10.49□□□□□ -0.73
NXF1-212ENST00000531872 CLSPNQ9HAW4 1339 aa10.49□□□□□ -0.73
NXF1-212ENST00000531872 CELF2O95319 508 aaKnown RBP10.48□□□□□ -0.73
NXF1-212ENST00000531872 DGKZQ13574 1117 aa10.48□□□□□ -0.73
NXF1-212ENST00000531872 NUTM1Q86Y26 1132 aa10.48□□□□□ -0.73
NXF1-212ENST00000531872 GPRC5DQ9NZD1 345 aa10.48□□□□□ -0.73
NXF1-212ENST00000531872 ERVV-1B6SEH8 477 aa10.47□□□□□ -0.73
NXF1-212ENST00000531872 CC2D1BQ5T0F9 858 aaKnown RBP10.47□□□□□ -0.73
NXF1-212ENST00000531872 SLC51AQ86UW1 340 aa10.47□□□□□ -0.73
NXF1-212ENST00000531872 NIM1KQ8IY84 436 aa10.47□□□□□ -0.73
NXF1-212ENST00000531872 CRAMP1Q96RY5 1269 aa10.47□□□□□ -0.73
NXF1-212ENST00000531872 VPS33BQ9H267 617 aa10.47□□□□□ -0.73
NXF1-212ENST00000531872 IBTKQ9P2D0 1353 aaPredicted RBP10.47□□□□□ -0.73
NXF1-212ENST00000531872 PPIP5K2O43314 1243 aa10.46□□□□□ -0.73
NXF1-212ENST00000531872 PRKAR2BP31323 418 aa10.46□□□□□ -0.73
NXF1-212ENST00000531872 CXCL9Q07325 125 aa10.46□□□□□ -0.73
NXF1-212ENST00000531872 CIAPIN1Q6FI81 312 aa10.46□□□□□ -0.73
NXF1-212ENST00000531872 ZC3H15Q8WU90 426 aaKnown RBP10.46□□□□□ -0.73
NXF1-212ENST00000531872 RPGRQ92834 1020 aaKnown RBP10.46□□□□□ -0.73
NXF1-212ENST00000531872 GLIS2Q9BZE0 524 aaPredicted RBP10.46□□□□□ -0.73
NXF1-212ENST00000531872 RSPH6AQ9H0K4 717 aa10.46□□□□□ -0.73
NXF1-212ENST00000531872 NPC1L1Q9UHC9 1359 aa10.46□□□□□ -0.74
NXF1-212ENST00000531872 CDHR2Q9BYE9 1310 aa10.45□□□□□ -0.74
NXF1-212ENST00000531872 PPEF1O14829 653 aaPredicted RBP10.45□□□□□ -0.74
NXF1-212ENST00000531872 HIRAP54198 1017 aaPredicted RBP10.45□□□□□ -0.74
NXF1-212ENST00000531872 NOGQ13253 232 aa10.45□□□□□ -0.74
NXF1-212ENST00000531872 AOC3Q16853 763 aa10.45□□□□□ -0.74
NXF1-212ENST00000531872 MCM10Q7L590 875 aa10.45□□□□□ -0.74
NXF1-212ENST00000531872 RBM17Q96I25 401 aaKnown RBP10.45□□□□□ -0.74
NXF1-212ENST00000531872 ZIC5Q96T25 663 aa10.45□□□□□ -0.74
NXF1-212ENST00000531872 RTFDC1Q9BY42 306 aaPredicted RBP10.45□□□□□ -0.74
NXF1-212ENST00000531872 ZNRF3Q9ULT6 936 aa10.45□□□□□ -0.74
NXF1-212ENST00000531872 NUP98P52948 1817 aa10.44□□□□□ -0.74
NXF1-212ENST00000531872 MAP3K15Q6ZN16 1313 aa10.44□□□□□ -0.74
NXF1-212ENST00000531872 UBN2Q6ZU65 1347 aa10.44□□□□□ -0.74
NXF1-212ENST00000531872 GMPSP49915 693 aaPredicted RBP10.44□□□□□ -0.74
NXF1-212ENST00000531872 CDC37L1Q7L3B6 337 aa10.44□□□□□ -0.74
NXF1-212ENST00000531872 RTF1Q92541 710 aaKnown RBP10.44□□□□□ -0.74
NXF1-212ENST00000531872 ATP6V0A2Q9Y487 856 aa10.44□□□□□ -0.74
NXF1-212ENST00000531872 TCERG1O14776 1098 aaKnown RBP10.43□□□□□ -0.74
NXF1-212ENST00000531872 HTATSF1O43719 755 aaKnown RBP10.43□□□□□ -0.74
NXF1-212ENST00000531872 NTSR2O95665 410 aa10.43□□□□□ -0.74
NXF1-212ENST00000531872 SUSD4Q5VX71 490 aa10.43□□□□□ -0.74
NXF1-212ENST00000531872 TTLL7Q6ZT98 887 aa10.43□□□□□ -0.74
NXF1-212ENST00000531872 C3orf67Q6ZVT6 689 aa10.43□□□□□ -0.74
NXF1-212ENST00000531872 ZNF34Q8IZ26 560 aa10.43□□□□□ -0.74
NXF1-212ENST00000531872 ZNF408Q9H9D4 720 aa10.43□□□□□ -0.74
NXF1-212ENST00000531872 SAGE1Q9NXZ1 904 aa10.43□□□□□ -0.74
NXF1-212ENST00000531872 LAMB4A4D0S4 1761 aa10.43□□□□□ -0.74
NXF1-212ENST00000531872 GPTP24298 496 aa10.42□□□□□ -0.74
NXF1-212ENST00000531872 HUNKP57058 714 aa10.42□□□□□ -0.74
NXF1-212ENST00000531872 TRIM26Q12899 539 aaPredicted RBP10.42□□□□□ -0.74
NXF1-212ENST00000531872 DCTN1Q14203 1278 aa10.42□□□□□ -0.74
NXF1-212ENST00000531872 TAF7Q15545 349 aaPredicted RBP10.42□□□□□ -0.74
NXF1-212ENST00000531872 SUPT20HQ8NEM7 779 aa10.42□□□□□ -0.74
NXF1-212ENST00000531872 TRPM4Q8TD43 1214 aa10.42□□□□□ -0.74
NXF1-212ENST00000531872 FAM155AB1AL88 458 aaPredicted RBP10.41□□□□□ -0.74
NXF1-212ENST00000531872 SOX10P56693 466 aa10.41□□□□□ -0.74
NXF1-212ENST00000531872 KIAA2012Q0VF49 1180 aa10.41□□□□□ -0.74
NXF1-212ENST00000531872 SLC10A5Q5PT55 438 aa10.41□□□□□ -0.74
NXF1-212ENST00000531872 PRPF38BQ5VTL8 546 aaKnown RBP10.41□□□□□ -0.74
NXF1-212ENST00000531872 KIF6Q6ZMV9 814 aa10.41□□□□□ -0.74
NXF1-212ENST00000531872 NGEFQ8N5V2 710 aa10.41□□□□□ -0.74
NXF1-212ENST00000531872 NLRP3Q96P20 1036 aa10.41□□□□□ -0.74
NXF1-212ENST00000531872 TMX4Q9H1E5 349 aaPredicted RBP10.41□□□□□ -0.74
NXF1-212ENST00000531872 ABCC4O15439 1325 aa10.4□□□□□ -0.74
NXF1-212ENST00000531872 TNIP1Q15025 636 aa10.4□□□□□ -0.74
NXF1-212ENST00000531872 RGMBQ6NW40 437 aa10.4□□□□□ -0.74
NXF1-212ENST00000531872 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
NXF1-212ENST00000531872 PPP4R3CPQ6ZMV5 832 aa10.4□□□□□ -0.74
NXF1-212ENST00000531872 PPP1R42Q7Z4L9 355 aa10.4□□□□□ -0.74
NXF1-212ENST00000531872 USP48Q86UV5 1035 aa10.4□□□□□ -0.74
NXF1-212ENST00000531872 SP8Q8IXZ3 490 aa10.4□□□□□ -0.74
NXF1-212ENST00000531872 BCL2L13Q9BXK5 485 aa10.4□□□□□ -0.74
NXF1-212ENST00000531872 ZBTB3Q9H5J0 574 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms