RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 SPTLC1O15269 473 aa9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 DXOO77932 396 aaKnown RBP9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 GJA5P36382 358 aa9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 RETREG3Q86VR2 466 aa9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 KCNH5Q8NCM2 988 aa9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 IRX2Q9BZI1 471 aaPredicted RBP9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 TIMELESSQ9UNS1 1208 aa9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 CCDC7Q96M83 1385 aa9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 IL2RBP14784 551 aa9.82□□□□□ -0.84
TRIM53CP-201ENST00000531490 POLD1P28340 1107 aa9.82□□□□□ -0.84
TRIM53CP-201ENST00000531490 MYSM1Q5VVJ2 828 aa9.82□□□□□ -0.84
TRIM53CP-201ENST00000531490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRIM53CP-201ENST00000531490 DDX54Q8TDD1 881 aaKnown RBP9.82□□□□□ -0.84
TRIM53CP-201ENST00000531490 TESK2Q96S53 571 aa9.82□□□□□ -0.84
TRIM53CP-201ENST00000531490 TFCP2L1Q9NZI6 479 aa9.82□□□□□ -0.84
TRIM53CP-201ENST00000531490 PCDHB15Q9Y5E8 787 aa9.82□□□□□ -0.84
TRIM53CP-201ENST00000531490 PIK3C2AO00443 1686 aa9.82□□□□□ -0.84
TRIM53CP-201ENST00000531490 SPRYD7Q5W111 196 aa9.81□□□□□ -0.84
TRIM53CP-201ENST00000531490 MSL1Q68DK7 614 aa9.81□□□□□ -0.84
TRIM53CP-201ENST00000531490 RIC3Q7Z5B4 369 aa9.81□□□□□ -0.84
TRIM53CP-201ENST00000531490 NME9Q86XW9 330 aa9.81□□□□□ -0.84
TRIM53CP-201ENST00000531490 ANKRD24Q8TF21 1146 aa9.8□□□□□ -0.84
TRIM53CP-201ENST00000531490 ZNF526Q8TF50 670 aaPredicted RBP9.8□□□□□ -0.84
TRIM53CP-201ENST00000531490 SYTL4Q96C24 671 aaPredicted RBP9.8□□□□□ -0.84
TRIM53CP-201ENST00000531490 SLC12A5Q9H2X9 1139 aa9.8□□□□□ -0.84
TRIM53CP-201ENST00000531490 PAPPAQ13219 1627 aa9.8□□□□□ -0.84
TRIM53CP-201ENST00000531490 NFAT5O94916 1531 aa9.8□□□□□ -0.84
TRIM53CP-201ENST00000531490 JUNDP17535 347 aa9.79□□□□□ -0.84
TRIM53CP-201ENST00000531490 MTMR2Q13614 643 aa9.79□□□□□ -0.84
TRIM53CP-201ENST00000531490 SLC16A10Q8TF71 515 aa9.79□□□□□ -0.84
TRIM53CP-201ENST00000531490 LTV1Q96GA3 475 aaPredicted RBP9.79□□□□□ -0.84
TRIM53CP-201ENST00000531490 FAM117AQ9C073 453 aa9.79□□□□□ -0.84
TRIM53CP-201ENST00000531490 LIMD1Q9UGP4 676 aa9.79□□□□□ -0.84
TRIM53CP-201ENST00000531490 WWC3Q9ULE0 1092 aa9.79□□□□□ -0.84
TRIM53CP-201ENST00000531490 ATP10DQ9P241 1426 aa9.79□□□□□ -0.84
TRIM53CP-201ENST00000531490 KTN1Q86UP2 1357 aaKnown RBP9.78□□□□□ -0.84
TRIM53CP-201ENST00000531490 SLC27A3Q5K4L6 730 aa9.78□□□□□ -0.84
TRIM53CP-201ENST00000531490 TMC1Q8TDI8 760 aa9.78□□□□□ -0.84
TRIM53CP-201ENST00000531490 SHANK3Q9BYB0 1731 aa9.78□□□□□ -0.84
TRIM53CP-201ENST00000531490 TTC21AQ8NDW8 1320 aa9.78□□□□□ -0.84
TRIM53CP-201ENST00000531490 SBNO2Q9Y2G9 1366 aa9.78□□□□□ -0.84
TRIM53CP-201ENST00000531490 ZNF598Q86UK7 904 aaKnown RBP9.77□□□□□ -0.84
TRIM53CP-201ENST00000531490 COL23A1Q86Y22 540 aaPredicted RBP9.77□□□□□ -0.84
TRIM53CP-201ENST00000531490 NHSQ6T4R5 1651 aa9.77□□□□□ -0.85
TRIM53CP-201ENST00000531490 ABCC6O95255 1503 aa9.77□□□□□ -0.85
TRIM53CP-201ENST00000531490 SPDYE5A6NIY4 337 aa9.76□□□□□ -0.85
TRIM53CP-201ENST00000531490 GRIN3BO60391 1043 aa9.76□□□□□ -0.85
TRIM53CP-201ENST00000531490 RPIAP49247 311 aa9.76□□□□□ -0.85
TRIM53CP-201ENST00000531490 CSPP1Q1MSJ5 1256 aa9.76□□□□□ -0.85
TRIM53CP-201ENST00000531490 PRR7Q8TB68 274 aa9.76□□□□□ -0.85
TRIM53CP-201ENST00000531490 RSPH6AQ9H0K4 717 aa9.76□□□□□ -0.85
TRIM53CP-201ENST00000531490 USP47Q96K76 1375 aa9.76□□□□□ -0.85
TRIM53CP-201ENST00000531490 WNK3Q9BYP7 1800 aa9.76□□□□□ -0.85
TRIM53CP-201ENST00000531490 FBLN1P23142 703 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 ZNF697Q5TEC3 545 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 SMIM5Q71RC9 77 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 DDRGK1Q96HY6 314 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 ZBTB3Q9H5J0 574 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 CCNL1Q9UK58 526 aaPredicted RBP9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 AKAP12Q02952 1782 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 CHD4Q14839 1912 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 GFRA3O60609 400 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 HSPA6P17066 643 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 NEUROD2Q15784 382 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 TUSC1Q2TAM9 212 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 PRPF38BQ5VTL8 546 aaKnown RBP9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 TRIM67Q6ZTA4 783 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 CCDC24Q8N4L8 307 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 POLR3EQ9NVU0 708 aa9.75□□□□□ -0.85
TRIM53CP-201ENST00000531490 RGPD5Q99666 1765 aa9.74□□□□□ -0.85
TRIM53CP-201ENST00000531490 NSD2O96028 1365 aa9.74□□□□□ -0.85
TRIM53CP-201ENST00000531490 USP31Q70CQ4 1352 aa9.74□□□□□ -0.85
TRIM53CP-201ENST00000531490 CD163L1Q9NR16 1453 aa9.74□□□□□ -0.85
TRIM53CP-201ENST00000531490 CLK2P49760 499 aaKnown RBP9.74□□□□□ -0.85
TRIM53CP-201ENST00000531490 QPCTQ16769 361 aa9.74□□□□□ -0.85
TRIM53CP-201ENST00000531490 PUS7Q96PZ0 661 aaKnown RBP9.74□□□□□ -0.85
TRIM53CP-201ENST00000531490 PDZRN3Q9UPQ7 1066 aa9.74□□□□□ -0.85
TRIM53CP-201ENST00000531490 BTAF1O14981 1849 aa9.73□□□□□ -0.85
TRIM53CP-201ENST00000531490 CFAP99D6REC4 459 aa9.73□□□□□ -0.85
TRIM53CP-201ENST00000531490 ZBTB24O43167 697 aaPredicted RBP9.73□□□□□ -0.85
TRIM53CP-201ENST00000531490 HSPA5P11021 654 aaKnown RBP9.73□□□□□ -0.85
TRIM53CP-201ENST00000531490 TMF1P82094 1093 aa9.73□□□□□ -0.85
TRIM53CP-201ENST00000531490 AMIGO3Q86WK7 504 aa9.73□□□□□ -0.85
TRIM53CP-201ENST00000531490 NUDT12Q9BQG2 462 aa9.73□□□□□ -0.85
TRIM53CP-201ENST00000531490 ANKRD36BQ8N2N9 1353 aa9.72□□□□□ -0.85
TRIM53CP-201ENST00000531490 LILRB3O75022 631 aa9.72□□□□□ -0.85
TRIM53CP-201ENST00000531490 CD2BP2O95400 341 aaKnown RBP9.72□□□□□ -0.85
TRIM53CP-201ENST00000531490 BRPF1P55201 1214 aaPredicted RBP9.72□□□□□ -0.85
TRIM53CP-201ENST00000531490 DESI1Q6ICB0 168 aa9.72□□□□□ -0.85
TRIM53CP-201ENST00000531490 IP6K1Q92551 441 aa9.72□□□□□ -0.85
TRIM53CP-201ENST00000531490 GDF9O60383 454 aa9.71□□□□□ -0.86
TRIM53CP-201ENST00000531490 LAPTM4AQ15012 233 aa9.71□□□□□ -0.86
TRIM53CP-201ENST00000531490 SKIV2LQ15477 1246 aaKnown RBP9.71□□□□□ -0.86
TRIM53CP-201ENST00000531490 SH3D19Q5HYK7 790 aa9.71□□□□□ -0.86
TRIM53CP-201ENST00000531490 USHBP1Q8N6Y0 703 aa9.71□□□□□ -0.86
TRIM53CP-201ENST00000531490 ZCRB1Q8TBF4 217 aaKnown RBP9.71□□□□□ -0.86
TRIM53CP-201ENST00000531490 ADCY9O60503 1353 aa9.71□□□□□ -0.86
TRIM53CP-201ENST00000531490 NRG2O14511 850 aaPredicted RBP9.7□□□□□ -0.86
TRIM53CP-201ENST00000531490 PRKCSHP14314 528 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms