RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 ISCA1Q9BUE6 129 aa24.39■■□□□ 1.49
PACSIN3-208ENST00000531226 RNF123Q5XPI4 1314 aa24.38■■□□□ 1.49
PACSIN3-208ENST00000531226 SLX4Q8IY92 1834 aa24.38■■□□□ 1.49
PACSIN3-208ENST00000531226 ERFEQ4G0M1 354 aa24.38■■□□□ 1.49
PACSIN3-208ENST00000531226 G2E3Q7L622 706 aa24.38■■□□□ 1.49
PACSIN3-208ENST00000531226 UTP14AQ9BVJ6 771 aaKnown RBP24.38■■□□□ 1.49
PACSIN3-208ENST00000531226 DALRD3Q5D0E6 543 aaKnown RBP24.37■■□□□ 1.49
PACSIN3-208ENST00000531226 ADCY9O60503 1353 aa24.37■■□□□ 1.49
PACSIN3-208ENST00000531226 KLRG2A4D1S0 409 aaPredicted RBP24.36■■□□□ 1.49
PACSIN3-208ENST00000531226 FLIIQ13045 1269 aa24.36■■□□□ 1.49
PACSIN3-208ENST00000531226 KSR2Q6VAB6 950 aa24.36■■□□□ 1.49
PACSIN3-208ENST00000531226 GOLGB1Q14789 3259 aaKnown RBP24.36■■□□□ 1.49
PACSIN3-208ENST00000531226 ATP5J2-PTCD1G3V325 749 aa24.35■■□□□ 1.49
PACSIN3-208ENST00000531226 SRGNP10124 158 aa24.35■■□□□ 1.49
PACSIN3-208ENST00000531226 METTL22Q9BUU2 404 aaPredicted RBP24.35■■□□□ 1.49
PACSIN3-208ENST00000531226 MAP3K2Q9Y2U5 619 aa24.35■■□□□ 1.49
PACSIN3-208ENST00000531226 SBF1O95248 1867 aa24.34■■□□□ 1.49
PACSIN3-208ENST00000531226 PI4KAP2A4QPH2 592 aa24.34■■□□□ 1.49
PACSIN3-208ENST00000531226 TRIM28Q13263 835 aaKnown RBP24.34■■□□□ 1.49
PACSIN3-208ENST00000531226 TTLL6Q8N841 843 aa24.34■■□□□ 1.49
PACSIN3-208ENST00000531226 PI4KAP1Q8N8J0 262 aa24.34■■□□□ 1.49
PACSIN3-208ENST00000531226 MYD88Q99836 296 aa24.34■■□□□ 1.49
PACSIN3-208ENST00000531226 MYH3P11055 1940 aa24.33■■□□□ 1.49
PACSIN3-208ENST00000531226 CCDC88AQ3V6T2 1871 aa24.33■■□□□ 1.49
PACSIN3-208ENST00000531226 STYK1Q6J9G0 422 aa24.33■■□□□ 1.49
PACSIN3-208ENST00000531226 ZNF622Q969S3 477 aaKnown RBP eCLIP24.33■■□□□ 1.49
PACSIN3-208ENST00000531226 MASTLQ96GX5 879 aa24.33■■□□□ 1.49
PACSIN3-208ENST00000531226 SH3TC1Q8TE82 1336 aa24.33■■□□□ 1.48
PACSIN3-208ENST00000531226 FER1L6Q2WGJ9 1857 aa24.32■■□□□ 1.48
PACSIN3-208ENST00000531226 FKBP5Q13451 457 aaPredicted RBP24.32■■□□□ 1.48
PACSIN3-208ENST00000531226 TRMT112Q9UI30 125 aaKnown RBP24.32■■□□□ 1.48
PACSIN3-208ENST00000531226 NPR1P16066 1061 aa24.31■■□□□ 1.48
PACSIN3-208ENST00000531226 CRY2Q49AN0 593 aa24.31■■□□□ 1.48
PACSIN3-208ENST00000531226 SLC10A5Q5PT55 438 aa24.31■■□□□ 1.48
PACSIN3-208ENST00000531226 ZNF428Q96B54 188 aa24.31■■□□□ 1.48
PACSIN3-208ENST00000531226 CNKSR1Q969H4 720 aa24.3■■□□□ 1.48
PACSIN3-208ENST00000531226 ZBED9Q6R2W3 1325 aa24.3■■□□□ 1.48
PACSIN3-208ENST00000531226 CT47B1P0C2W7 299 aaPredicted RBP24.29■■□□□ 1.48
PACSIN3-208ENST00000531226 CCDC191Q8NCU4 936 aa24.29■■□□□ 1.48
PACSIN3-208ENST00000531226 TAF1P21675 1872 aa24.29■■□□□ 1.48
PACSIN3-208ENST00000531226 UTRNP46939 3433 aa24.29■■□□□ 1.48
PACSIN3-208ENST00000531226 NEXNQ0ZGT2 675 aa24.28■■□□□ 1.48
PACSIN3-208ENST00000531226 SYNE4Q8N205 404 aa24.28■■□□□ 1.48
PACSIN3-208ENST00000531226 DNAAF4Q8WXU2 420 aa24.27■■□□□ 1.48
PACSIN3-208ENST00000531226 NLRP3Q96P20 1036 aa24.27■■□□□ 1.48
PACSIN3-208ENST00000531226 CWC25Q9NXE8 425 aaPredicted RBP24.27■■□□□ 1.48
PACSIN3-208ENST00000531226 IGKV5-2P06315 115 aa24.26■■□□□ 1.47
PACSIN3-208ENST00000531226 ALDH1L2Q3SY69 923 aa24.26■■□□□ 1.47
PACSIN3-208ENST00000531226 PRPF40BQ6NWY9 871 aaKnown RBP24.26■■□□□ 1.47
PACSIN3-208ENST00000531226 C3orf67Q6ZVT6 689 aa24.26■■□□□ 1.47
PACSIN3-208ENST00000531226 MRPL50Q8N5N7 158 aaKnown RBP24.26■■□□□ 1.47
PACSIN3-208ENST00000531226 SSH1Q8WYL5 1049 aa24.26■■□□□ 1.47
PACSIN3-208ENST00000531226 RPGRQ92834 1020 aaKnown RBP24.26■■□□□ 1.47
PACSIN3-208ENST00000531226 FAM89AQ96GI7 184 aa24.26■■□□□ 1.47
PACSIN3-208ENST00000531226 DICER1Q9UPY3 1922 aaKnown RBP24.25■■□□□ 1.47
PACSIN3-208ENST00000531226 HCLS1P14317 486 aaPredicted RBP24.25■■□□□ 1.47
PACSIN3-208ENST00000531226 YY1P25490 414 aa24.25■■□□□ 1.47
PACSIN3-208ENST00000531226 ARHGAP27Q6ZUM4 889 aa24.25■■□□□ 1.47
PACSIN3-208ENST00000531226 ZBTB38Q8NAP3 1195 aaPredicted RBP24.25■■□□□ 1.47
PACSIN3-208ENST00000531226 NEURL1BA8MQ27 555 aa24.24■■□□□ 1.47
PACSIN3-208ENST00000531226 HOXA10P31260 410 aaPredicted RBP24.24■■□□□ 1.47
PACSIN3-208ENST00000531226 PCCAP05165 728 aaPredicted RBP24.23■■□□□ 1.47
PACSIN3-208ENST00000531226 ALDH1B1P30837 517 aa24.23■■□□□ 1.47
PACSIN3-208ENST00000531226 CWF19L2Q2TBE0 894 aaKnown RBP24.23■■□□□ 1.47
PACSIN3-208ENST00000531226 RTL5Q5HYW3 569 aaPredicted RBP24.23■■□□□ 1.47
PACSIN3-208ENST00000531226 F6X3S4 739 aa24.22■■□□□ 1.47
PACSIN3-208ENST00000531226 BCL2L13Q9BXK5 485 aa24.22■■□□□ 1.47
PACSIN3-208ENST00000531226 IRS4O14654 1257 aaPredicted RBP24.21■■□□□ 1.47
PACSIN3-208ENST00000531226 C21orf2O43822 256 aa24.21■■□□□ 1.47
PACSIN3-208ENST00000531226 LINS1Q8NG48 757 aa24.21■■□□□ 1.47
PACSIN3-208ENST00000531226 RBM17Q96I25 401 aaKnown RBP24.21■■□□□ 1.47
PACSIN3-208ENST00000531226 CRAMP1Q96RY5 1269 aa24.21■■□□□ 1.47
PACSIN3-208ENST00000531226 PTPRCP08575 1304 aa24.2■■□□□ 1.46
PACSIN3-208ENST00000531226 CDHR2Q9BYE9 1310 aa24.2■■□□□ 1.46
PACSIN3-208ENST00000531226 SMC4Q9NTJ3 1288 aa24.2■■□□□ 1.46
PACSIN3-208ENST00000531226 ZNF219Q9P2Y4 722 aaPredicted RBP24.2■■□□□ 1.46
PACSIN3-208ENST00000531226 TIAM2Q8IVF5 1701 aa24.19■■□□□ 1.46
PACSIN3-208ENST00000531226 HSP90B1P14625 803 aaKnown RBP24.19■■□□□ 1.46
PACSIN3-208ENST00000531226 SOGA3Q5TF21 947 aa24.19■■□□□ 1.46
PACSIN3-208ENST00000531226 C7orf43Q8WVR3 580 aa24.19■■□□□ 1.46
PACSIN3-208ENST00000531226 GCKRQ14397 625 aa24.18■■□□□ 1.46
PACSIN3-208ENST00000531226 SF3B3Q15393 1217 aaKnown RBP24.18■■□□□ 1.46
PACSIN3-208ENST00000531226 BEND3Q5T5X7 828 aa24.18■■□□□ 1.46
PACSIN3-208ENST00000531226 LRRC37AA6NMS7 1700 aa24.18■■□□□ 1.46
PACSIN3-208ENST00000531226 ABCC4O15439 1325 aa24.17■■□□□ 1.46
PACSIN3-208ENST00000531226 JARID2Q92833 1246 aaPredicted RBP24.17■■□□□ 1.46
PACSIN3-208ENST00000531226 SPEF2Q9C093 1822 aa24.17■■□□□ 1.46
PACSIN3-208ENST00000531226 NFKBIEO00221 500 aa24.16■■□□□ 1.46
PACSIN3-208ENST00000531226 RARSP54136 660 aaKnown RBP24.16■■□□□ 1.46
PACSIN3-208ENST00000531226 BRPF1P55201 1214 aaPredicted RBP24.16■■□□□ 1.46
PACSIN3-208ENST00000531226 RASSF7Q02833 373 aa24.16■■□□□ 1.46
PACSIN3-208ENST00000531226 H7C1W4 665 aa24.15■■□□□ 1.46
PACSIN3-208ENST00000531226 PDE8AO60658 829 aa24.15■■□□□ 1.46
PACSIN3-208ENST00000531226 CCDC93Q567U6 631 aa24.15■■□□□ 1.46
PACSIN3-208ENST00000531226 DDX46Q7L014 1031 aaKnown RBP24.15■■□□□ 1.46
PACSIN3-208ENST00000531226 SNED1Q8TER0 1413 aa24.15■■□□□ 1.46
PACSIN3-208ENST00000531226 COL4A1P02462 1669 aa24.15■■□□□ 1.46
PACSIN3-208ENST00000531226 LTBP3Q9NS15 1303 aa24.14■■□□□ 1.46
PACSIN3-208ENST00000531226 PPEF1O14829 653 aaPredicted RBP24.14■■□□□ 1.45
PACSIN3-208ENST00000531226 SLC4A10Q6U841 1118 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms