RNA–Protein interactions for RNA: ENST00000531201.5

IFT46-208, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-208ENST00000531201 IFIT2P09913 472 aaKnown RBP11.4□□□□□ -0.58
IFT46-208ENST00000531201 CSB-PGBD3P0DP91 1061 aa11.4□□□□□ -0.58
IFT46-208ENST00000531201 MCTP1Q6DN14 999 aa11.4□□□□□ -0.58
IFT46-208ENST00000531201 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
IFT46-208ENST00000531201 KIAA1211Q6ZU35 1233 aa11.4□□□□□ -0.58
IFT46-208ENST00000531201 RIC3Q7Z5B4 369 aa11.4□□□□□ -0.58
IFT46-208ENST00000531201 TTC5Q8N0Z6 440 aa11.4□□□□□ -0.58
IFT46-208ENST00000531201 BICC1Q9H694 974 aaKnown RBP11.4□□□□□ -0.58
IFT46-208ENST00000531201 DIAPH3Q9NSV4 1193 aa11.4□□□□□ -0.58
IFT46-208ENST00000531201 TJP1Q07157 1748 aa11.4□□□□□ -0.58
IFT46-208ENST00000531201 CYP27B1O15528 508 aa11.39□□□□□ -0.59
IFT46-208ENST00000531201 PKP1Q13835 747 aa11.39□□□□□ -0.59
IFT46-208ENST00000531201 GCKRQ14397 625 aa11.39□□□□□ -0.59
IFT46-208ENST00000531201 ZNF496Q96IT1 587 aaPredicted RBP11.39□□□□□ -0.59
IFT46-208ENST00000531201 TTC14Q96N46 770 aa11.39□□□□□ -0.59
IFT46-208ENST00000531201 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
IFT46-208ENST00000531201 SNX14Q9Y5W7 946 aa11.39□□□□□ -0.59
IFT46-208ENST00000531201 JCADQ9P266 1359 aa11.39□□□□□ -0.59
IFT46-208ENST00000531201 KCPQ6ZWJ8 1503 aa11.39□□□□□ -0.59
IFT46-208ENST00000531201 NHSL1Q5SYE7 1610 aa11.39□□□□□ -0.59
IFT46-208ENST00000531201 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 SASH1O94885 1247 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 G3BP1Q13283 466 aaKnown RBP eCLIP11.38□□□□□ -0.59
IFT46-208ENST00000531201 SLC39A6Q13433 755 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 AACSQ86V21 672 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 NFATC2IPQ8NCF5 419 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 XAGE3Q8WTP9 111 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 COPRSQ9NQ92 184 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 COL5A2P05997 1499 aaPredicted RBP11.38□□□□□ -0.59
IFT46-208ENST00000531201 WDR17Q8IZU2 1322 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 PCDH11XQ9BZA7 1347 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 PCDH11YQ9BZA8 1340 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 TNS2Q63HR2 1409 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 MAP4K4O95819 1239 aaPredicted RBP11.38□□□□□ -0.59
IFT46-208ENST00000531201 MBD3O95983 291 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 RABL6Q3YEC7 729 aaPredicted RBP11.38□□□□□ -0.59
IFT46-208ENST00000531201 PANK2Q9BZ23 570 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
IFT46-208ENST00000531201 PA2G4Q9UQ80 394 aaKnown RBP11.38□□□□□ -0.59
IFT46-208ENST00000531201 WDR33Q9C0J8 1336 aaKnown RBP11.37□□□□□ -0.59
IFT46-208ENST00000531201 STRCQ7RTU9 1775 aa11.37□□□□□ -0.59
IFT46-208ENST00000531201 AIMP1Q12904 312 aaKnown RBP11.37□□□□□ -0.59
IFT46-208ENST00000531201 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
IFT46-208ENST00000531201 COPS6Q7L5N1 327 aa11.37□□□□□ -0.59
IFT46-208ENST00000531201 GAS2L3Q86XJ1 694 aa11.37□□□□□ -0.59
IFT46-208ENST00000531201 UPF3BQ9BZI7 483 aaKnown RBP11.37□□□□□ -0.59
IFT46-208ENST00000531201 MED23Q9ULK4 1368 aa11.37□□□□□ -0.59
IFT46-208ENST00000531201 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
IFT46-208ENST00000531201 CCDC171Q6TFL3 1326 aa11.36□□□□□ -0.59
IFT46-208ENST00000531201 SPEF2Q9C093 1822 aa11.36□□□□□ -0.59
IFT46-208ENST00000531201 CABP4P57796 275 aa11.36□□□□□ -0.59
IFT46-208ENST00000531201 VPS53Q5VIR6 699 aa11.36□□□□□ -0.59
IFT46-208ENST00000531201 CWC27Q6UX04 472 aaKnown RBP11.36□□□□□ -0.59
IFT46-208ENST00000531201 TICAM2Q86XR7 235 aa11.36□□□□□ -0.59
IFT46-208ENST00000531201 PLBD2Q8NHP8 589 aa11.36□□□□□ -0.59
IFT46-208ENST00000531201 EAF2Q96CJ1 260 aaPredicted RBP11.36□□□□□ -0.59
IFT46-208ENST00000531201 MYD88Q99836 296 aa11.36□□□□□ -0.59
IFT46-208ENST00000531201 PCDH10Q9P2E7 1040 aa11.36□□□□□ -0.59
IFT46-208ENST00000531201 RPAP1Q9BWH6 1393 aaPredicted RBP11.35□□□□□ -0.59
IFT46-208ENST00000531201 ERVV-2B6SEH9 535 aa11.35□□□□□ -0.59
IFT46-208ENST00000531201 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
IFT46-208ENST00000531201 NKX1-1Q15270 411 aaPredicted RBP11.35□□□□□ -0.59
IFT46-208ENST00000531201 CHRNA2Q15822 529 aa11.35□□□□□ -0.59
IFT46-208ENST00000531201 ZSCAN23Q3MJ62 389 aa11.35□□□□□ -0.59
IFT46-208ENST00000531201 BRINP3Q76B58 766 aa11.35□□□□□ -0.59
IFT46-208ENST00000531201 DDX17Q92841 729 aaKnown RBP11.35□□□□□ -0.59
IFT46-208ENST00000531201 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
IFT46-208ENST00000531201 LIMCH1Q9UPQ0 1083 aa11.35□□□□□ -0.59
IFT46-208ENST00000531201 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.35□□□□□ -0.59
IFT46-208ENST00000531201 TOGARAM1Q9Y4F4 1720 aa11.35□□□□□ -0.59
IFT46-208ENST00000531201 PDIA4P13667 645 aaKnown RBP11.34□□□□□ -0.59
IFT46-208ENST00000531201 MYL6BP14649 208 aa11.34□□□□□ -0.59
IFT46-208ENST00000531201 AK2P54819 239 aa11.34□□□□□ -0.59
IFT46-208ENST00000531201 CCDC173Q0VFZ6 552 aa11.34□□□□□ -0.59
IFT46-208ENST00000531201 NECTIN1Q15223 517 aa11.34□□□□□ -0.59
IFT46-208ENST00000531201 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
IFT46-208ENST00000531201 TMEM87AQ8NBN3 555 aa11.34□□□□□ -0.59
IFT46-208ENST00000531201 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
IFT46-208ENST00000531201 ZSCAN31Q96LW9 406 aaPredicted RBP11.34□□□□□ -0.59
IFT46-208ENST00000531201 PPP1R9BQ96SB3 815 aa11.34□□□□□ -0.59
IFT46-208ENST00000531201 ZSWIM6Q9HCJ5 1215 aa11.34□□□□□ -0.59
IFT46-208ENST00000531201 SH2B1Q9NRF2 756 aaPredicted RBP11.34□□□□□ -0.59
IFT46-208ENST00000531201 PRPF40AO75400 957 aaKnown RBP11.33□□□□□ -0.6
IFT46-208ENST00000531201 ATP5JP18859 108 aa11.33□□□□□ -0.6
IFT46-208ENST00000531201 CASP7P55210 303 aa11.33□□□□□ -0.6
IFT46-208ENST00000531201 EPHA10Q5JZY3 1008 aa11.33□□□□□ -0.6
IFT46-208ENST00000531201 CAVIN1Q6NZI2 390 aaKnown RBP11.33□□□□□ -0.6
IFT46-208ENST00000531201 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
IFT46-208ENST00000531201 GPT2Q8TD30 523 aa11.33□□□□□ -0.6
IFT46-208ENST00000531201 MAP4K1Q92918 833 aa11.33□□□□□ -0.6
IFT46-208ENST00000531201 USP16Q9Y5T5 823 aa11.33□□□□□ -0.6
IFT46-208ENST00000531201 PLCH1Q4KWH8 1693 aa11.33□□□□□ -0.6
IFT46-208ENST00000531201 ZKSCAN1P17029 563 aaPredicted RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 NASPP49321 788 aaPredicted RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 PTPN12Q05209 780 aaKnown RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 RUFY3Q7L099 469 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 ZCRB1Q8TBF4 217 aaKnown RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 ARXQ96QS3 562 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 CARD10Q9BWT7 1032 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 ALDH8A1Q9H2A2 487 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms