RNA–Protein interactions for RNA: ENST00000531168.1

MMP8-204, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-204ENST00000531168 ISCA1Q9BUE6 129 aa11.72□□□□□ -0.53
MMP8-204ENST00000531168 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
MMP8-204ENST00000531168 BCS1LQ9Y276 419 aa11.72□□□□□ -0.53
MMP8-204ENST00000531168 DUOX1Q9NRD9 1551 aa11.71□□□□□ -0.53
MMP8-204ENST00000531168 VAMP4O75379 141 aa11.71□□□□□ -0.53
MMP8-204ENST00000531168 ERFEQ4G0M1 354 aa11.71□□□□□ -0.53
MMP8-204ENST00000531168 DALRD3Q5D0E6 543 aaKnown RBP11.71□□□□□ -0.53
MMP8-204ENST00000531168 TPTE2Q6XPS3 522 aa11.71□□□□□ -0.53
MMP8-204ENST00000531168 ANKRD13DQ6ZTN6 518 aa11.71□□□□□ -0.53
MMP8-204ENST00000531168 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
MMP8-204ENST00000531168 NYXQ9GZU5 481 aa11.71□□□□□ -0.53
MMP8-204ENST00000531168 ZNF646O15015 1829 aaPredicted RBP11.7□□□□□ -0.54
MMP8-204ENST00000531168 FAM177BA6PVY3 158 aa11.7□□□□□ -0.54
MMP8-204ENST00000531168 H0YIN7 160 aa11.7□□□□□ -0.54
MMP8-204ENST00000531168 YY1P25490 414 aa11.7□□□□□ -0.54
MMP8-204ENST00000531168 GOLGA2Q08379 1002 aa11.7□□□□□ -0.54
MMP8-204ENST00000531168 STYK1Q6J9G0 422 aa11.7□□□□□ -0.54
MMP8-204ENST00000531168 G2E3Q7L622 706 aa11.7□□□□□ -0.54
MMP8-204ENST00000531168 TRMT2AQ8IZ69 625 aaKnown RBP11.7□□□□□ -0.54
MMP8-204ENST00000531168 MYH16Q9H6N6 1097 aa11.7□□□□□ -0.54
MMP8-204ENST00000531168 PSME4Q14997 1843 aa11.7□□□□□ -0.54
MMP8-204ENST00000531168 SLFN5Q08AF3 891 aa11.69□□□□□ -0.54
MMP8-204ENST00000531168 C3orf67Q6ZVT6 689 aa11.69□□□□□ -0.54
MMP8-204ENST00000531168 TTLL6Q8N841 843 aa11.69□□□□□ -0.54
MMP8-204ENST00000531168 MASTLQ96GX5 879 aa11.69□□□□□ -0.54
MMP8-204ENST00000531168 E9PSI1 815 aa11.68□□□□□ -0.54
MMP8-204ENST00000531168 TCERG1O14776 1098 aaKnown RBP11.68□□□□□ -0.54
MMP8-204ENST00000531168 PRELPP51888 382 aa11.68□□□□□ -0.54
MMP8-204ENST00000531168 TRIM28Q13263 835 aaKnown RBP11.68□□□□□ -0.54
MMP8-204ENST00000531168 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
MMP8-204ENST00000531168 PPP1R42Q7Z4L9 355 aa11.68□□□□□ -0.54
MMP8-204ENST00000531168 UTP14AQ9BVJ6 771 aaKnown RBP11.68□□□□□ -0.54
MMP8-204ENST00000531168 CHMP4AQ9BY43 222 aa11.68□□□□□ -0.54
MMP8-204ENST00000531168 WDR90Q96KV7 1748 aa11.68□□□□□ -0.54
MMP8-204ENST00000531168 COL4A5P29400 1685 aa11.68□□□□□ -0.54
MMP8-204ENST00000531168 NFKBIEO00221 500 aa11.67□□□□□ -0.54
MMP8-204ENST00000531168 NPHP1O15259 732 aa11.67□□□□□ -0.54
MMP8-204ENST00000531168 NPR1P16066 1061 aa11.67□□□□□ -0.54
MMP8-204ENST00000531168 FLIIQ13045 1269 aa11.67□□□□□ -0.54
MMP8-204ENST00000531168 PRPF40BQ6NWY9 871 aaKnown RBP11.67□□□□□ -0.54
MMP8-204ENST00000531168 SYNE4Q8N205 404 aa11.67□□□□□ -0.54
MMP8-204ENST00000531168 C7orf43Q8WVR3 580 aa11.67□□□□□ -0.54
MMP8-204ENST00000531168 CDCA7LQ96GN5 454 aa11.67□□□□□ -0.54
MMP8-204ENST00000531168 METTL22Q9BUU2 404 aaPredicted RBP11.67□□□□□ -0.54
MMP8-204ENST00000531168 STK31Q9BXU1 1019 aa11.67□□□□□ -0.54
MMP8-204ENST00000531168 SH3TC1Q8TE82 1336 aa11.66□□□□□ -0.54
MMP8-204ENST00000531168 LTBP3Q9NS15 1303 aa11.66□□□□□ -0.54
MMP8-204ENST00000531168 ATP5J2-PTCD1G3V325 749 aa11.66□□□□□ -0.54
MMP8-204ENST00000531168 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
MMP8-204ENST00000531168 IGKV5-2P06315 115 aa11.66□□□□□ -0.54
MMP8-204ENST00000531168 HOXA10P31260 410 aaPredicted RBP11.66□□□□□ -0.54
MMP8-204ENST00000531168 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
MMP8-204ENST00000531168 CNKSR1Q969H4 720 aa11.66□□□□□ -0.54
MMP8-204ENST00000531168 ZNF622Q969S3 477 aaKnown RBP eCLIP11.66□□□□□ -0.54
MMP8-204ENST00000531168 MAP3K2Q9Y2U5 619 aa11.66□□□□□ -0.54
MMP8-204ENST00000531168 PI4KAP2A4QPH2 592 aa11.65□□□□□ -0.54
MMP8-204ENST00000531168 RASSF7Q02833 373 aa11.65□□□□□ -0.54
MMP8-204ENST00000531168 RIC3Q7Z5B4 369 aa11.65□□□□□ -0.54
MMP8-204ENST00000531168 SLC51AQ86UW1 340 aa11.65□□□□□ -0.54
MMP8-204ENST00000531168 PI4KAP1Q8N8J0 262 aa11.65□□□□□ -0.54
MMP8-204ENST00000531168 ZNF784Q8NCA9 323 aaPredicted RBP11.65□□□□□ -0.54
MMP8-204ENST00000531168 MYD88Q99836 296 aa11.65□□□□□ -0.54
MMP8-204ENST00000531168 ABCC4O15439 1325 aa11.64□□□□□ -0.55
MMP8-204ENST00000531168 C21orf2O43822 256 aa11.64□□□□□ -0.55
MMP8-204ENST00000531168 DDX58O95786 925 aaKnown RBP11.64□□□□□ -0.55
MMP8-204ENST00000531168 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
MMP8-204ENST00000531168 ARHGAP27Q6ZUM4 889 aa11.64□□□□□ -0.55
MMP8-204ENST00000531168 CCDC191Q8NCU4 936 aa11.64□□□□□ -0.55
MMP8-204ENST00000531168 CRAMP1Q96RY5 1269 aa11.64□□□□□ -0.55
MMP8-204ENST00000531168 TRMT112Q9UI30 125 aaKnown RBP11.64□□□□□ -0.55
MMP8-204ENST00000531168 SCN4AP35499 1836 aa11.64□□□□□ -0.55
MMP8-204ENST00000531168 CDHR2Q9BYE9 1310 aa11.63□□□□□ -0.55
MMP8-204ENST00000531168 NEURL1BA8MQ27 555 aa11.63□□□□□ -0.55
MMP8-204ENST00000531168 PCCAP05165 728 aaPredicted RBP11.63□□□□□ -0.55
MMP8-204ENST00000531168 ZNF428Q96B54 188 aa11.63□□□□□ -0.55
MMP8-204ENST00000531168 FAM89AQ96GI7 184 aa11.63□□□□□ -0.55
MMP8-204ENST00000531168 ADAMTSL1Q8N6G6 1762 aa11.62□□□□□ -0.55
MMP8-204ENST00000531168 SCN9AQ15858 1988 aa11.62□□□□□ -0.55
MMP8-204ENST00000531168 CT47B1P0C2W7 299 aaPredicted RBP11.62□□□□□ -0.55
MMP8-204ENST00000531168 HCLS1P14317 486 aaPredicted RBP11.62□□□□□ -0.55
MMP8-204ENST00000531168 FKBP5Q13451 457 aaPredicted RBP11.62□□□□□ -0.55
MMP8-204ENST00000531168 CWF19L2Q2TBE0 894 aaKnown RBP11.62□□□□□ -0.55
MMP8-204ENST00000531168 OLFM4Q6UX06 510 aa11.62□□□□□ -0.55
MMP8-204ENST00000531168 ZBTB38Q8NAP3 1195 aaPredicted RBP11.62□□□□□ -0.55
MMP8-204ENST00000531168 DNAAF4Q8WXU2 420 aa11.62□□□□□ -0.55
MMP8-204ENST00000531168 NLRP3Q96P20 1036 aa11.62□□□□□ -0.55
MMP8-204ENST00000531168 CWC25Q9NXE8 425 aaPredicted RBP11.62□□□□□ -0.55
MMP8-204ENST00000531168 ZC3H4Q9UPT8 1303 aaKnown RBP11.61□□□□□ -0.55
MMP8-204ENST00000531168 ALDH1B1P30837 517 aa11.61□□□□□ -0.55
MMP8-204ENST00000531168 CASP7P55210 303 aa11.61□□□□□ -0.55
MMP8-204ENST00000531168 SF3B3Q15393 1217 aaKnown RBP11.61□□□□□ -0.55
MMP8-204ENST00000531168 CCDC93Q567U6 631 aa11.61□□□□□ -0.55
MMP8-204ENST00000531168 SOGA3Q5TF21 947 aa11.61□□□□□ -0.55
MMP8-204ENST00000531168 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
MMP8-204ENST00000531168 MRPL50Q8N5N7 158 aaKnown RBP11.61□□□□□ -0.55
MMP8-204ENST00000531168 RPGRQ92834 1020 aaKnown RBP11.61□□□□□ -0.55
MMP8-204ENST00000531168 RTL9Q8NET4 1388 aa11.6□□□□□ -0.55
MMP8-204ENST00000531168 F6X3S4 739 aa11.6□□□□□ -0.55
MMP8-204ENST00000531168 IRS4O14654 1257 aaPredicted RBP11.6□□□□□ -0.55
MMP8-204ENST00000531168 LMNB1P20700 586 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms