RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
CTSF-208ENST00000530565 CT47B1P0C2W7 299 aaPredicted RBP10.99□□□□□ -0.65
CTSF-208ENST00000530565 AIMP1Q12904 312 aaKnown RBP10.99□□□□□ -0.65
CTSF-208ENST00000530565 COPS6Q7L5N1 327 aa10.99□□□□□ -0.65
CTSF-208ENST00000530565 MAP3K15Q6ZN16 1313 aa10.99□□□□□ -0.65
CTSF-208ENST00000530565 CACNA1FO60840 1977 aa10.99□□□□□ -0.65
CTSF-208ENST00000530565 SLX4Q8IY92 1834 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 ERVV-1B6SEH8 477 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 H0YIN7 160 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 RGL2O15211 777 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 CLEC4GQ6UXB4 293 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 ZNF428Q96B54 188 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 ZBTB3Q9H5J0 574 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 PHAXQ9H814 394 aaKnown RBP10.98□□□□□ -0.65
CTSF-208ENST00000530565 ZNF652Q9Y2D9 606 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 NUP98P52948 1817 aa10.98□□□□□ -0.65
CTSF-208ENST00000530565 HLFQ16534 295 aa10.97□□□□□ -0.65
CTSF-208ENST00000530565 G2E3Q7L622 706 aa10.97□□□□□ -0.65
CTSF-208ENST00000530565 ADAMTSL1Q8N6G6 1762 aa10.96□□□□□ -0.65
CTSF-208ENST00000530565 LTBP3Q9NS15 1303 aa10.96□□□□□ -0.65
CTSF-208ENST00000530565 ALDH1L2Q3SY69 923 aa10.96□□□□□ -0.65
CTSF-208ENST00000530565 TBC1D9BQ66K14 1250 aa10.96□□□□□ -0.65
CTSF-208ENST00000530565 GIGYF2Q6Y7W6 1299 aaKnown RBP10.96□□□□□ -0.65
CTSF-208ENST00000530565 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
CTSF-208ENST00000530565 PLBD2Q8NHP8 589 aa10.96□□□□□ -0.65
CTSF-208ENST00000530565 SSH1Q8WYL5 1049 aa10.96□□□□□ -0.65
CTSF-208ENST00000530565 CREBZFQ9NS37 354 aa10.96□□□□□ -0.65
CTSF-208ENST00000530565 SCN4AP35499 1836 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 CNTNAP1P78357 1384 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 PASKQ96RG2 1323 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 C21orf2O43822 256 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 DDX58O95786 925 aaKnown RBP10.95□□□□□ -0.66
CTSF-208ENST00000530565 FLIIQ13045 1269 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 PRR5LQ6MZQ0 368 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 BICDL1Q6ZP65 573 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 CCDC24Q8N4L8 307 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 MRPL50Q8N5N7 158 aaKnown RBP10.95□□□□□ -0.66
CTSF-208ENST00000530565 BRIP1Q9BX63 1249 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 MKRN1Q9UHC7 482 aaKnown RBP10.95□□□□□ -0.66
CTSF-208ENST00000530565 ANKRD36CQ5JPF3 1778 aa10.95□□□□□ -0.66
CTSF-208ENST00000530565 FOXN1O15353 648 aa10.94□□□□□ -0.66
CTSF-208ENST00000530565 DDNO94850 711 aaPredicted RBP10.94□□□□□ -0.66
CTSF-208ENST00000530565 RARSP54136 660 aaKnown RBP10.94□□□□□ -0.66
CTSF-208ENST00000530565 FKBP5Q13451 457 aaPredicted RBP10.94□□□□□ -0.66
CTSF-208ENST00000530565 ERFEQ4G0M1 354 aa10.94□□□□□ -0.66
CTSF-208ENST00000530565 HSP90AB3PQ58FF7 597 aa10.94□□□□□ -0.66
CTSF-208ENST00000530565 DPY19L2Q6NUT2 758 aa10.94□□□□□ -0.66
CTSF-208ENST00000530565 KSR2Q6VAB6 950 aa10.94□□□□□ -0.66
CTSF-208ENST00000530565 RIC3Q7Z5B4 369 aa10.94□□□□□ -0.66
CTSF-208ENST00000530565 ZNF622Q969S3 477 aaKnown RBP eCLIP10.94□□□□□ -0.66
CTSF-208ENST00000530565 SETDB2Q96T68 719 aa10.94□□□□□ -0.66
CTSF-208ENST00000530565 BCL2L13Q9BXK5 485 aa10.94□□□□□ -0.66
CTSF-208ENST00000530565 SMC4Q9NTJ3 1288 aa10.94□□□□□ -0.66
CTSF-208ENST00000530565 ZNF219Q9P2Y4 722 aaPredicted RBP10.94□□□□□ -0.66
CTSF-208ENST00000530565 NIP7Q9Y221 180 aaKnown RBP eCLIP10.94□□□□□ -0.66
CTSF-208ENST00000530565 PI4KAP2A4QPH2 592 aa10.93□□□□□ -0.66
CTSF-208ENST00000530565 PDE6BP35913 854 aa10.93□□□□□ -0.66
CTSF-208ENST00000530565 TCIRG1Q13488 830 aa10.93□□□□□ -0.66
CTSF-208ENST00000530565 ZNF34Q8IZ26 560 aa10.93□□□□□ -0.66
CTSF-208ENST00000530565 PI4KAP1Q8N8J0 262 aa10.93□□□□□ -0.66
CTSF-208ENST00000530565 PDZRN3Q9UPQ7 1066 aa10.93□□□□□ -0.66
CTSF-208ENST00000530565 GPTP24298 496 aa10.92□□□□□ -0.66
CTSF-208ENST00000530565 TAOK3Q9H2K8 898 aa10.92□□□□□ -0.66
CTSF-208ENST00000530565 PRDM10Q9NQV6 1147 aa10.92□□□□□ -0.66
CTSF-208ENST00000530565 MAP3K2Q9Y2U5 619 aa10.92□□□□□ -0.66
CTSF-208ENST00000530565 PTPRCP08575 1304 aa10.91□□□□□ -0.66
CTSF-208ENST00000530565 UBN2Q6ZU65 1347 aa10.91□□□□□ -0.66
CTSF-208ENST00000530565 SRGNP10124 158 aa10.91□□□□□ -0.66
CTSF-208ENST00000530565 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
CTSF-208ENST00000530565 PARP10Q53GL7 1025 aa10.91□□□□□ -0.66
CTSF-208ENST00000530565 STYK1Q6J9G0 422 aa10.91□□□□□ -0.66
CTSF-208ENST00000530565 PRPF40BQ6NWY9 871 aaKnown RBP10.91□□□□□ -0.66
CTSF-208ENST00000530565 C7orf43Q8WVR3 580 aa10.91□□□□□ -0.66
CTSF-208ENST00000530565 L3MBTL3Q96JM7 780 aaPredicted RBP10.91□□□□□ -0.66
CTSF-208ENST00000530565 MYD88Q99836 296 aa10.91□□□□□ -0.66
CTSF-208ENST00000530565 ISCA1Q9BUE6 129 aa10.91□□□□□ -0.66
CTSF-208ENST00000530565 METTL22Q9BUU2 404 aaPredicted RBP10.91□□□□□ -0.66
CTSF-208ENST00000530565 FAM177BA6PVY3 158 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 F6X3S4 739 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 ATP5J2-PTCD1G3V325 749 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 BCAR3O75815 825 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 ITGBL1O95965 494 aaPredicted RBP10.9□□□□□ -0.66
CTSF-208ENST00000530565 VEGFBP49765 207 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 SUSD4Q5VX71 490 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 TPTE2Q6XPS3 522 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 NLRP10Q86W26 655 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 LDHDQ86WU2 507 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 NBPF5PQ86XG9 351 aaPredicted RBP10.9□□□□□ -0.66
CTSF-208ENST00000530565 DNAAF4Q8WXU2 420 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 NYXQ9GZU5 481 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 TAF1DQ9H5J8 278 aaPredicted RBP10.9□□□□□ -0.66
CTSF-208ENST00000530565 NOB1Q9ULX3 412 aaKnown RBP10.9□□□□□ -0.66
CTSF-208ENST00000530565 THSD7BQ9C0I4 1608 aa10.9□□□□□ -0.66
CTSF-208ENST00000530565 IBTKQ9P2D0 1353 aaPredicted RBP10.9□□□□□ -0.67
CTSF-208ENST00000530565 KIF16BQ96L93 1317 aa10.89□□□□□ -0.67
CTSF-208ENST00000530565 NTSR2O95665 410 aa10.89□□□□□ -0.67
CTSF-208ENST00000530565 NEXNQ0ZGT2 675 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms