RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 CASZ1Q86V15 1759 aa31.2■■■□□ 2.59
ME3-209ENST00000530520 MSL1Q68DK7 614 aa31.2■■■□□ 2.58
ME3-209ENST00000530520 FAM177BA6PVY3 158 aa31.19■■■□□ 2.58
ME3-209ENST00000530520 NFIXQ14938 502 aa31.19■■■□□ 2.58
ME3-209ENST00000530520 EXOC6Q8TAG9 804 aa31.19■■■□□ 2.58
ME3-209ENST00000530520 MEIS3Q99687 375 aa31.19■■■□□ 2.58
ME3-209ENST00000530520 CHMP4BQ9H444 224 aaKnown RBP31.19■■■□□ 2.58
ME3-209ENST00000530520 IBTKQ9P2D0 1353 aaPredicted RBP31.19■■■□□ 2.58
ME3-209ENST00000530520 GRM8O00222 908 aa31.18■■■□□ 2.58
ME3-209ENST00000530520 USP44Q9H0E7 712 aa31.18■■■□□ 2.58
ME3-209ENST00000530520 PSDA5PKW4 1024 aaPredicted RBP31.17■■■□□ 2.58
ME3-209ENST00000530520 ZBTB7BO15156 539 aaPredicted RBP31.17■■■□□ 2.58
ME3-209ENST00000530520 SUSD4Q5VX71 490 aa31.17■■■□□ 2.58
ME3-209ENST00000530520 PPP1R42Q7Z4L9 355 aa31.17■■■□□ 2.58
ME3-209ENST00000530520 CARMIL3Q8ND23 1372 aa31.17■■■□□ 2.58
ME3-209ENST00000530520 SLC16A10Q8TF71 515 aa31.17■■■□□ 2.58
ME3-209ENST00000530520 SOCS7O14512 581 aa31.16■■■□□ 2.58
ME3-209ENST00000530520 GNAI3P08754 354 aa31.16■■■□□ 2.58
ME3-209ENST00000530520 UTP14AQ9BVJ6 771 aaKnown RBP31.16■■■□□ 2.58
ME3-209ENST00000530520 TRMT112Q9UI30 125 aaKnown RBP31.16■■■□□ 2.58
ME3-209ENST00000530520 UBTFL1P0CB47 393 aaPredicted RBP31.15■■■□□ 2.58
ME3-209ENST00000530520 RTL5Q5HYW3 569 aaPredicted RBP31.15■■■□□ 2.58
ME3-209ENST00000530520 UBE3BQ7Z3V4 1068 aa31.15■■■□□ 2.58
ME3-209ENST00000530520 NBPF7P0C2Y1 421 aaPredicted RBP31.14■■■□□ 2.58
ME3-209ENST00000530520 TM4SF1P30408 202 aa31.14■■■□□ 2.58
ME3-209ENST00000530520 JARID2Q92833 1246 aaPredicted RBP31.14■■■□□ 2.58
ME3-209ENST00000530520 NBPF5PQ86XG9 351 aaPredicted RBP31.13■■■□□ 2.57
ME3-209ENST00000530520 ZBTB38Q8NAP3 1195 aaPredicted RBP31.13■■■□□ 2.57
ME3-209ENST00000530520 NTSR2O95665 410 aa31.13■■■□□ 2.57
ME3-209ENST00000530520 PCCAP05165 728 aaPredicted RBP31.13■■■□□ 2.57
ME3-209ENST00000530520 FAM89AQ96GI7 184 aa31.13■■■□□ 2.57
ME3-209ENST00000530520 NYXQ9GZU5 481 aa31.13■■■□□ 2.57
ME3-209ENST00000530520 UTYO14607 1347 aa31.12■■■□□ 2.57
ME3-209ENST00000530520 H7C1W4 665 aa31.12■■■□□ 2.57
ME3-209ENST00000530520 NPHP1O15259 732 aa31.11■■■□□ 2.57
ME3-209ENST00000530520 MMP10P09238 476 aa31.11■■■□□ 2.57
ME3-209ENST00000530520 DDR1Q08345 913 aa31.11■■■□□ 2.57
ME3-209ENST00000530520 ZBTB40Q9NUA8 1239 aa31.11■■■□□ 2.57
ME3-209ENST00000530520 SH3TC1Q8TE82 1336 aa31.1■■■□□ 2.57
ME3-209ENST00000530520 GTF2E1P29083 439 aaPredicted RBP31.1■■■□□ 2.57
ME3-209ENST00000530520 POLRMTO00411 1230 aaKnown RBP31.09■■■□□ 2.57
ME3-209ENST00000530520 TPTE2Q6XPS3 522 aa31.09■■■□□ 2.57
ME3-209ENST00000530520 HDAC5Q9UQL6 1122 aa31.09■■■□□ 2.57
ME3-209ENST00000530520 ZBTB7AO95365 584 aa31.09■■■□□ 2.57
ME3-209ENST00000530520 SERPINB2P05120 415 aa31.09■■■□□ 2.57
ME3-209ENST00000530520 CASP7P55210 303 aa31.09■■■□□ 2.57
ME3-209ENST00000530520 NUTM1Q86Y26 1132 aa31.09■■■□□ 2.57
ME3-209ENST00000530520 C1orf115Q9H7X2 142 aa31.09■■■□□ 2.57
ME3-209ENST00000530520 PARP3Q9Y6F1 533 aa31.09■■■□□ 2.57
ME3-209ENST00000530520 GNAI2P04899 355 aa31.08■■■□□ 2.57
ME3-209ENST00000530520 LAMB2P55268 1798 aa31.07■■■□□ 2.57
ME3-209ENST00000530520 CDHR2Q9BYE9 1310 aa31.07■■■□□ 2.56
ME3-209ENST00000530520 AAMPQ13685 434 aa31.07■■■□□ 2.56
ME3-209ENST00000530520 SYNE4Q8N205 404 aa31.07■■■□□ 2.56
ME3-209ENST00000530520 CNBD1Q8NA66 436 aa31.07■■■□□ 2.56
ME3-209ENST00000530520 LRRFIP2Q9Y608 721 aaKnown RBP31.07■■■□□ 2.56
ME3-209ENST00000530520 SUCLG2Q96I99 432 aa31.06■■■□□ 2.56
ME3-209ENST00000530520 MTFR1LQ9H019 292 aa31.06■■■□□ 2.56
ME3-209ENST00000530520 DDX60Q8IY21 1712 aaKnown RBP31.06■■■□□ 2.56
ME3-209ENST00000530520 MYH3P11055 1940 aa31.06■■■□□ 2.56
ME3-209ENST00000530520 NRXN2Q9P2S2 1712 aa31.05■■■□□ 2.56
ME3-209ENST00000530520 IRS4O14654 1257 aaPredicted RBP31.05■■■□□ 2.56
ME3-209ENST00000530520 ERFEQ4G0M1 354 aa31.05■■■□□ 2.56
ME3-209ENST00000530520 PRR5LQ6MZQ0 368 aa31.03■■■□□ 2.56
ME3-209ENST00000530520 ATF5Q9Y2D1 282 aaPredicted RBP31.03■■■□□ 2.56
ME3-209ENST00000530520 ABCC12Q96J65 1359 aa31.02■■■□□ 2.56
ME3-209ENST00000530520 HSP90B1P14625 803 aaKnown RBP31.02■■■□□ 2.56
ME3-209ENST00000530520 ST5P78524 1137 aa31.02■■■□□ 2.56
ME3-209ENST00000530520 HCLS1P14317 486 aaPredicted RBP31.01■■■□□ 2.56
ME3-209ENST00000530520 CCDC24Q8N4L8 307 aa31.01■■■□□ 2.56
ME3-209ENST00000530520 BICC1Q9H694 974 aaKnown RBP31■■■□□ 2.55
ME3-209ENST00000530520 ERICH6BQ5W0A0 696 aa31■■■□□ 2.55
ME3-209ENST00000530520 KAZALD1Q96I82 304 aa31■■■□□ 2.55
ME3-209ENST00000530520 PDE8AO60658 829 aa30.99■■■□□ 2.55
ME3-209ENST00000530520 EPHA10Q5JZY3 1008 aa30.99■■■□□ 2.55
ME3-209ENST00000530520 PLA2G12BQ9BX93 195 aa30.99■■■□□ 2.55
ME3-209ENST00000530520 POLD1P28340 1107 aa30.98■■■□□ 2.55
ME3-209ENST00000530520 TNRC6CQ9HCJ0 1690 aaKnown RBP30.97■■■□□ 2.55
ME3-209ENST00000530520 FOXO4P98177 505 aa30.96■■■□□ 2.55
ME3-209ENST00000530520 SLC10A5Q5PT55 438 aa30.96■■■□□ 2.55
ME3-209ENST00000530520 ANKRD44Q8N8A2 993 aa30.96■■■□□ 2.55
ME3-209ENST00000530520 PCDHB15Q9Y5E8 787 aa30.96■■■□□ 2.55
ME3-209ENST00000530520 CTSWP56202 376 aa30.95■■■□□ 2.54
ME3-209ENST00000530520 CEP85Q6P2H3 762 aa30.95■■■□□ 2.54
ME3-209ENST00000530520 CHMP3Q9Y3E7 222 aa30.95■■■□□ 2.54
ME3-209ENST00000530520 ANKRD31Q8N7Z5 1873 aa30.95■■■□□ 2.54
ME3-209ENST00000530520 RIC1Q4ADV7 1423 aa30.94■■■□□ 2.54
ME3-209ENST00000530520 LMBR1LQ6UX01 489 aa30.94■■■□□ 2.54
ME3-209ENST00000530520 NLRP3Q96P20 1036 aa30.94■■■□□ 2.54
ME3-209ENST00000530520 RABL6Q3YEC7 729 aaPredicted RBP30.93■■■□□ 2.54
ME3-209ENST00000530520 RPAP2Q8IXW5 612 aaPredicted RBP30.93■■■□□ 2.54
ME3-209ENST00000530520 CCDC85AQ96PX6 553 aaPredicted RBP30.92■■■□□ 2.54
ME3-209ENST00000530520 TTLL11Q8NHH1 800 aa30.91■■■□□ 2.54
ME3-209ENST00000530520 GTF3C3Q9Y5Q9 886 aa30.91■■■□□ 2.54
ME3-209ENST00000530520 SRGAP3O43295 1099 aa30.9■■■□□ 2.54
ME3-209ENST00000530520 ATP8B2P98198 1209 aa30.9■■■□□ 2.54
ME3-209ENST00000530520 MTX1Q13505 466 aa30.9■■■□□ 2.54
ME3-209ENST00000530520 PNMA6EA0A0J9YXQ4 647 aa30.89■■■□□ 2.54
ME3-209ENST00000530520 CSF1RP07333 972 aa30.89■■■□□ 2.54
ME3-209ENST00000530520 C3orf67Q6ZVT6 689 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms