RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 UHRF1BP1Q6BDS2 1440 aa17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 RHPN1Q8TCX5 695 aa17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 CPLX3Q8WVH0 158 aa17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 INSRP06213 1382 aa17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 ALDH1L1O75891 902 aa17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 SSBP05455 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 RBM25P49756 843 aaKnown RBP17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 GNG11P61952 73 aa17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 SEPT7Q16181 437 aaKnown RBP17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 ENOX2Q16206 610 aaKnown RBP17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 NUP88Q99567 741 aaPredicted RBP17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 PAFAH1B1P43034 410 aa17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 DESP17661 470 aa17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 MRPL50Q8N5N7 158 aaKnown RBP17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 GTPBP4Q9BZE4 634 aaKnown RBP17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 ATP10BO94823 1461 aa17.81■□□□□ 0.44
PCDHA4-203ENST00000530339 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 ZSCAN29Q8IWY8 852 aaPredicted RBP17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 GIMAP7Q8NHV1 300 aa17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 NUP153P49790 1475 aaKnown RBP17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 RNF123Q5XPI4 1314 aa17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 ZPR1O75312 459 aa17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 TNNQ9UQP3 1299 aa17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 USO1O60763 962 aaKnown RBP17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 TUBB4AP04350 444 aa17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 LMAN1P49257 510 aa17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 ZNF518AQ6AHZ1 1483 aa17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 ZFYP08048 801 aaPredicted RBP17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 CCDC12Q8WUD4 166 aaPredicted RBP17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 ZBTB40Q9NUA8 1239 aa17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 DACT1Q9NYF0 836 aa17.8■□□□□ 0.44
PCDHA4-203ENST00000530339 A2MP01023 1474 aa17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 A0A087WZG4 1122 aa17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 NECAB1Q8N987 351 aa17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 KDM2BQ8NHM5 1336 aa17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 TMEM266Q2M3C6 531 aa17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 CCDC102BQ68D86 513 aa17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 VPS36Q86VN1 386 aa17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 DCTPP1Q9H773 170 aa17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 ORC3Q9UBD5 711 aaPredicted RBP17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
PCDHA4-203ENST00000530339 TNIP1Q15025 636 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 MICALCLQ6ZW33 695 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 GOLGA8AA7E2F4 631 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 MAP3K2Q9Y2U5 619 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 NPC1L1Q9UHC9 1359 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 MPHOSPH10O00566 681 aaKnown RBP17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 POTEJP0CG39 1038 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 ZNF76P36508 570 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 CCDC85AQ96PX6 553 aaPredicted RBP17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 ABCF2Q9UG63 623 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 BMP15O95972 392 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 UQCRFS1P1P0C7P4 283 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 TMX1Q9H3N1 280 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 SLU7O95391 586 aaKnown RBP17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 CETN2P41208 172 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 USP5P45974 858 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 DNM1Q05193 864 aaKnown RBP17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 CATIPQ7Z7H3 387 aa17.78■□□□□ 0.44
PCDHA4-203ENST00000530339 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.44
PCDHA4-203ENST00000530339 TNRQ92752 1358 aa17.77■□□□□ 0.44
PCDHA4-203ENST00000530339 ARFGAP3Q9NP61 516 aa17.77■□□□□ 0.44
PCDHA4-203ENST00000530339 ACEP12821 1306 aa17.77■□□□□ 0.44
PCDHA4-203ENST00000530339 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.43
PCDHA4-203ENST00000530339 LUZP1Q86V48 1076 aa17.77■□□□□ 0.43
PCDHA4-203ENST00000530339 ZGPATQ8N5A5 531 aaKnown RBP17.77■□□□□ 0.43
PCDHA4-203ENST00000530339 TESK2Q96S53 571 aa17.77■□□□□ 0.43
PCDHA4-203ENST00000530339 MKNK2Q9HBH9 465 aa17.77■□□□□ 0.43
PCDHA4-203ENST00000530339 MPRIPQ6WCQ1 1025 aa17.77■□□□□ 0.43
PCDHA4-203ENST00000530339 CACNA2D4Q7Z3S7 1137 aa17.77■□□□□ 0.43
PCDHA4-203ENST00000530339 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.43
PCDHA4-203ENST00000530339 TEX14Q8IWB6 1497 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 POLR3DP05423 398 aaPredicted RBP17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 KIF5BP33176 963 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 NGLY1Q96IV0 654 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 SRRTQ9BXP5 876 aaKnown RBP17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 TYRO3Q06418 890 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 C16orf71Q8IYS4 520 aaPredicted RBP17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 NCOA7Q8NI08 942 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 PIBF1Q8WXW3 757 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 SEPT11Q9NVA2 429 aaKnown RBP17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 SYCP2Q9BX26 1530 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 AMPD3Q01432 767 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 DNAJC25Q9H1X3 360 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 IARSP41252 1262 aaKnown RBP17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 UBASH3AP57075 661 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 BRF1Q92994 677 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 LRRC27Q9C0I9 530 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 DNAI1Q9UI46 699 aa17.76■□□□□ 0.43
PCDHA4-203ENST00000530339 PI4KAP2A4QPH2 592 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 IFIT3O14879 490 aaKnown RBP17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 CCDC178Q5BJE1 867 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 CTR9Q6PD62 1173 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 PI4KAP1Q8N8J0 262 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 INCENPQ9NQS7 918 aa17.75■□□□□ 0.43
PCDHA4-203ENST00000530339 TRMT112Q9UI30 125 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms