RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 BTBD6Q96KE9 485 aa9.38□□□□□ -0.91
USP47-209ENST00000530041 SLC30A3Q99726 388 aa9.38□□□□□ -0.91
USP47-209ENST00000530041 KLK14Q9P0G3 267 aa9.38□□□□□ -0.91
USP47-209ENST00000530041 DMGDHQ9UI17 866 aaKnown RBP9.38□□□□□ -0.91
USP47-209ENST00000530041 AMPD1P23109 780 aa9.37□□□□□ -0.91
USP47-209ENST00000530041 DGKZQ13574 1117 aa9.37□□□□□ -0.91
USP47-209ENST00000530041 C11orf91Q3C1V1 193 aa9.37□□□□□ -0.91
USP47-209ENST00000530041 CLP1Q92989 425 aaKnown RBP9.37□□□□□ -0.91
USP47-209ENST00000530041 SIN3BO75182 1162 aa9.36□□□□□ -0.91
USP47-209ENST00000530041 SNRPNP63162 240 aaKnown RBP9.36□□□□□ -0.91
USP47-209ENST00000530041 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
USP47-209ENST00000530041 TMEM151AQ8N4L1 468 aa9.36□□□□□ -0.91
USP47-209ENST00000530041 COL26A1Q96A83 441 aa9.36□□□□□ -0.91
USP47-209ENST00000530041 RRAGCQ9HB90 399 aa9.36□□□□□ -0.91
USP47-209ENST00000530041 CXXC1Q9P0U4 656 aaPredicted RBP9.36□□□□□ -0.91
USP47-209ENST00000530041 PPP1R15AO75807 674 aaPredicted RBP9.35□□□□□ -0.91
USP47-209ENST00000530041 GDF11O95390 407 aa9.35□□□□□ -0.91
USP47-209ENST00000530041 HOXB4P17483 251 aaPredicted RBP9.35□□□□□ -0.91
USP47-209ENST00000530041 LRFN2Q9ULH4 789 aa9.35□□□□□ -0.91
USP47-209ENST00000530041 MKL2Q9ULH7 1088 aa9.35□□□□□ -0.91
USP47-209ENST00000530041 ELOA3CA0A087WX78 387 aaPredicted RBP9.34□□□□□ -0.91
USP47-209ENST00000530041 ELOA3DA6NLF2 546 aaPredicted RBP9.34□□□□□ -0.91
USP47-209ENST00000530041 ELOA3BQ3SY89 546 aa9.34□□□□□ -0.91
USP47-209ENST00000530041 CHSY3Q70JA7 882 aa9.34□□□□□ -0.91
USP47-209ENST00000530041 ELOA3Q8NG57 546 aa9.34□□□□□ -0.91
USP47-209ENST00000530041 MDFIQ99750 246 aa9.34□□□□□ -0.91
USP47-209ENST00000530041 ADARB2-AS1A8MUL3 147 aa9.33□□□□□ -0.92
USP47-209ENST00000530041 EPB42P16452 691 aa9.33□□□□□ -0.92
USP47-209ENST00000530041 INPP5BP32019 993 aa9.33□□□□□ -0.92
USP47-209ENST00000530041 IDH3AP50213 366 aa9.33□□□□□ -0.92
USP47-209ENST00000530041 COX20Q5RI15 118 aa9.33□□□□□ -0.92
USP47-209ENST00000530041 RAB44Q7Z6P3 723 aaPredicted RBP9.33□□□□□ -0.92
USP47-209ENST00000530041 TNFRSF25Q93038 417 aa9.33□□□□□ -0.92
USP47-209ENST00000530041 EFCC1Q9HA90 598 aa9.33□□□□□ -0.92
USP47-209ENST00000530041 MICAL2O94851 1124 aa9.32□□□□□ -0.92
USP47-209ENST00000530041 IFT43Q96FT9 208 aa9.32□□□□□ -0.92
USP47-209ENST00000530041 SLAIN2Q9P270 581 aa9.32□□□□□ -0.92
USP47-209ENST00000530041 PTCD1O75127 700 aaKnown RBP9.31□□□□□ -0.92
USP47-209ENST00000530041 ALAS2P22557 587 aa9.31□□□□□ -0.92
USP47-209ENST00000530041 DGKGP49619 791 aa9.31□□□□□ -0.92
USP47-209ENST00000530041 ARSDP51689 593 aa9.31□□□□□ -0.92
USP47-209ENST00000530041 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
USP47-209ENST00000530041 LINC00114Q6XXX2 140 aa9.31□□□□□ -0.92
USP47-209ENST00000530041 BHMTQ93088 406 aa9.31□□□□□ -0.92
USP47-209ENST00000530041 GSX2Q9BZM3 304 aa9.31□□□□□ -0.92
USP47-209ENST00000530041 PIK3R2O00459 728 aa9.3□□□□□ -0.92
USP47-209ENST00000530041 GRNP28799 593 aaKnown RBP9.3□□□□□ -0.92
USP47-209ENST00000530041 CCINQ13939 588 aa9.3□□□□□ -0.92
USP47-209ENST00000530041 MKNK1Q9BUB5 465 aa9.3□□□□□ -0.92
USP47-209ENST00000530041 SAP130Q9H0E3 1048 aa9.3□□□□□ -0.92
USP47-209ENST00000530041 ATP2B4P23634 1241 aa9.29□□□□□ -0.92
USP47-209ENST00000530041 CAPN12Q6ZSI9 719 aa9.29□□□□□ -0.92
USP47-209ENST00000530041 C11orf16Q9NQ32 467 aa9.29□□□□□ -0.92
USP47-209ENST00000530041 GNB5O14775 395 aa9.28□□□□□ -0.92
USP47-209ENST00000530041 OPLAHO14841 1288 aa9.28□□□□□ -0.92
USP47-209ENST00000530041 TREML1Q86YW5 311 aa9.28□□□□□ -0.92
USP47-209ENST00000530041 PNMA5Q96PV4 448 aa9.28□□□□□ -0.92
USP47-209ENST00000530041 TMEM88BA6NKF7 163 aa9.27□□□□□ -0.93
USP47-209ENST00000530041 BRD2P25440 801 aaKnown RBP9.27□□□□□ -0.93
USP47-209ENST00000530041 ADH7P40394 386 aa9.27□□□□□ -0.93
USP47-209ENST00000530041 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
USP47-209ENST00000530041 KCTD17Q8N5Z5 321 aa9.27□□□□□ -0.93
USP47-209ENST00000530041 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.27□□□□□ -0.93
USP47-209ENST00000530041 DCAF5Q96JK2 942 aa9.26□□□□□ -0.93
USP47-209ENST00000530041 TNFRSF10BO14763 440 aa9.25□□□□□ -0.93
USP47-209ENST00000530041 NFKB1P19838 968 aa9.25□□□□□ -0.93
USP47-209ENST00000530041 ALYREFQ86V81 257 aaKnown RBP9.25□□□□□ -0.93
USP47-209ENST00000530041 ETFBKMTQ8IXQ9 262 aa9.25□□□□□ -0.93
USP47-209ENST00000530041 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
USP47-209ENST00000530041 UBE2OQ9C0C9 1292 aaKnown RBP9.24□□□□□ -0.93
USP47-209ENST00000530041 SUV39H2Q9H5I1 410 aa9.24□□□□□ -0.93
USP47-209ENST00000530041 STARD13Q9Y3M8 1113 aa9.24□□□□□ -0.93
USP47-209ENST00000530041 EGFRP00533 1210 aa9.23□□□□□ -0.93
USP47-209ENST00000530041 COL8A1P27658 744 aa9.23□□□□□ -0.93
USP47-209ENST00000530041 RGL4Q8IZJ4 473 aa9.23□□□□□ -0.93
USP47-209ENST00000530041 IGFLR1Q9H665 355 aa9.23□□□□□ -0.93
USP47-209ENST00000530041 NOP53Q9NZM5 478 aaKnown RBP9.23□□□□□ -0.93
USP47-209ENST00000530041 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
USP47-209ENST00000530041 USP20Q9Y2K6 914 aa9.23□□□□□ -0.93
USP47-209ENST00000530041 M0R082 166 aa9.22□□□□□ -0.93
USP47-209ENST00000530041 SUPT5HO00267 1087 aaKnown RBP9.22□□□□□ -0.93
USP47-209ENST00000530041 MAP3K6O95382 1288 aa9.22□□□□□ -0.93
USP47-209ENST00000530041 TBC1D8BQ0IIM8 1120 aa9.22□□□□□ -0.93
USP47-209ENST00000530041 FAM26DQ5JW98 314 aa9.22□□□□□ -0.93
USP47-209ENST00000530041 CMTR1Q8N1G2 835 aaKnown RBP9.22□□□□□ -0.93
USP47-209ENST00000530041 MICALL1Q8N3F8 863 aa9.22□□□□□ -0.93
USP47-209ENST00000530041 ZNF417Q8TAU3 575 aa9.22□□□□□ -0.93
USP47-209ENST00000530041 ZNF587Q96SQ5 575 aaPredicted RBP9.22□□□□□ -0.93
USP47-209ENST00000530041 PRDM6Q9NQX0 595 aa9.22□□□□□ -0.93
USP47-209ENST00000530041 DNAJB12Q9NXW2 375 aaKnown RBP9.22□□□□□ -0.93
USP47-209ENST00000530041 STIM2Q9P246 746 aa9.22□□□□□ -0.93
USP47-209ENST00000530041 SLC6A14Q9UN76 642 aa9.22□□□□□ -0.93
USP47-209ENST00000530041 SASH3O75995 380 aa9.21□□□□□ -0.94
USP47-209ENST00000530041 ALBP02768 609 aa9.21□□□□□ -0.94
USP47-209ENST00000530041 TARSP26639 723 aaKnown RBP9.21□□□□□ -0.94
USP47-209ENST00000530041 SSFA2P28290 1259 aa9.21□□□□□ -0.94
USP47-209ENST00000530041 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
USP47-209ENST00000530041 ZFATQ9P243 1243 aa9.21□□□□□ -0.94
USP47-209ENST00000530041 SEPT3Q9UH03 358 aa9.21□□□□□ -0.94
USP47-209ENST00000530041 KCNMB2Q9Y691 235 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms