RNA–Protein interactions for RNA: ENST00000529950.1

MS4A4A-204, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 5

Gene MS4A4A, Length 658 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-204ENST00000529950 NLRP10Q86W26 655 aa16.6■□□□□ 0.25
MS4A4A-204ENST00000529950 TSR2Q969E8 191 aaKnown RBP16.6■□□□□ 0.25
MS4A4A-204ENST00000529950 NLRP3Q96P20 1036 aa16.6■□□□□ 0.25
MS4A4A-204ENST00000529950 KIF3CO14782 793 aa16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 PRELPP51888 382 aa16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 GOLGA2Q08379 1002 aa16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 RBM17Q96I25 401 aaKnown RBP16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 IL16Q14005 1332 aa16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 RNF123Q5XPI4 1314 aa16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 LTBP3Q9NS15 1303 aa16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 RIC1Q4ADV7 1423 aa16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
MS4A4A-204ENST00000529950 SLC10A5Q5PT55 438 aa16.58■□□□□ 0.24
MS4A4A-204ENST00000529950 RIC3Q7Z5B4 369 aa16.58■□□□□ 0.24
MS4A4A-204ENST00000529950 C7orf43Q8WVR3 580 aa16.58■□□□□ 0.24
MS4A4A-204ENST00000529950 NMRK2Q9NPI5 230 aa16.58■□□□□ 0.24
MS4A4A-204ENST00000529950 SBF1O95248 1867 aa16.58■□□□□ 0.24
MS4A4A-204ENST00000529950 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
MS4A4A-204ENST00000529950 HOXA10P31260 410 aaPredicted RBP16.57■□□□□ 0.24
MS4A4A-204ENST00000529950 C16orf71Q8IYS4 520 aaPredicted RBP16.57■□□□□ 0.24
MS4A4A-204ENST00000529950 RTKN2Q8IZC4 609 aa16.57■□□□□ 0.24
MS4A4A-204ENST00000529950 TSPYL6Q8N831 410 aa16.57■□□□□ 0.24
MS4A4A-204ENST00000529950 PHAXQ9H814 394 aaKnown RBP16.57■□□□□ 0.24
MS4A4A-204ENST00000529950 CACNA1SQ13698 1873 aa16.56■□□□□ 0.24
MS4A4A-204ENST00000529950 TNRC6CQ9HCJ0 1690 aaKnown RBP16.56■□□□□ 0.24
MS4A4A-204ENST00000529950 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
MS4A4A-204ENST00000529950 DPY19L2Q6NUT2 758 aa16.56■□□□□ 0.24
MS4A4A-204ENST00000529950 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
MS4A4A-204ENST00000529950 CRAMP1Q96RY5 1269 aa16.56■□□□□ 0.24
MS4A4A-204ENST00000529950 ISCA1Q9BUE6 129 aa16.56■□□□□ 0.24
MS4A4A-204ENST00000529950 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
MS4A4A-204ENST00000529950 ARFGEF2Q9Y6D5 1785 aa16.56■□□□□ 0.24
MS4A4A-204ENST00000529950 GLTPD2A6NH11 291 aa16.55■□□□□ 0.24
MS4A4A-204ENST00000529950 DDX58O95786 925 aaKnown RBP16.55■□□□□ 0.24
MS4A4A-204ENST00000529950 HCLS1P14317 486 aaPredicted RBP16.55■□□□□ 0.24
MS4A4A-204ENST00000529950 FKBP4Q02790 459 aaKnown RBP eCLIP16.55■□□□□ 0.24
MS4A4A-204ENST00000529950 TWISTNBQ3B726 338 aaPredicted RBP16.55■□□□□ 0.24
MS4A4A-204ENST00000529950 CC2D2BQ6DHV5 1058 aa16.55■□□□□ 0.24
MS4A4A-204ENST00000529950 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
MS4A4A-204ENST00000529950 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
MS4A4A-204ENST00000529950 TMX4Q9H1E5 349 aaPredicted RBP16.55■□□□□ 0.24
MS4A4A-204ENST00000529950 RRAGCQ9HB90 399 aa16.55■□□□□ 0.24
MS4A4A-204ENST00000529950 TOMM70O94826 608 aa16.54■□□□□ 0.24
MS4A4A-204ENST00000529950 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
MS4A4A-204ENST00000529950 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
MS4A4A-204ENST00000529950 FER1L6Q2WGJ9 1857 aa16.54■□□□□ 0.24
MS4A4A-204ENST00000529950 ANKRD36CQ5JPF3 1778 aa16.54■□□□□ 0.24
MS4A4A-204ENST00000529950 TCERG1O14776 1098 aaKnown RBP16.53■□□□□ 0.24
MS4A4A-204ENST00000529950 PPEF1O14829 653 aaPredicted RBP16.53■□□□□ 0.24
MS4A4A-204ENST00000529950 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.24
MS4A4A-204ENST00000529950 TRIM28Q13263 835 aaKnown RBP16.52■□□□□ 0.24
MS4A4A-204ENST00000529950 GRIPAP1Q4V328 841 aa16.52■□□□□ 0.24
MS4A4A-204ENST00000529950 DDX46Q7L014 1031 aaKnown RBP16.52■□□□□ 0.24
MS4A4A-204ENST00000529950 FAM89AQ96GI7 184 aa16.52■□□□□ 0.24
MS4A4A-204ENST00000529950 MYD88Q99836 296 aa16.52■□□□□ 0.24
MS4A4A-204ENST00000529950 ZNF277Q9NRM2 450 aaPredicted RBP16.52■□□□□ 0.24
MS4A4A-204ENST00000529950 CCDC88AQ3V6T2 1871 aa16.51■□□□□ 0.23
MS4A4A-204ENST00000529950 ABCC4O15439 1325 aa16.5■□□□□ 0.23
MS4A4A-204ENST00000529950 VEGFAP15692 232 aaPredicted RBP16.5■□□□□ 0.23
MS4A4A-204ENST00000529950 IARSP41252 1262 aaKnown RBP16.5■□□□□ 0.23
MS4A4A-204ENST00000529950 RTL5Q5HYW3 569 aaPredicted RBP16.5■□□□□ 0.23
MS4A4A-204ENST00000529950 PSMD1Q99460 953 aa16.5■□□□□ 0.23
MS4A4A-204ENST00000529950 METTL22Q9BUU2 404 aaPredicted RBP16.5■□□□□ 0.23
MS4A4A-204ENST00000529950 MYH16Q9H6N6 1097 aa16.5■□□□□ 0.23
MS4A4A-204ENST00000529950 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
MS4A4A-204ENST00000529950 BBOX1O75936 387 aa16.49■□□□□ 0.23
MS4A4A-204ENST00000529950 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
MS4A4A-204ENST00000529950 HSP90B1P14625 803 aaKnown RBP16.49■□□□□ 0.23
MS4A4A-204ENST00000529950 EXOSC9Q06265 439 aaKnown RBP16.49■□□□□ 0.23
MS4A4A-204ENST00000529950 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
MS4A4A-204ENST00000529950 CCDC191Q8NCU4 936 aa16.49■□□□□ 0.23
MS4A4A-204ENST00000529950 RBM46Q8TBY0 533 aaKnown RBP16.49■□□□□ 0.23
MS4A4A-204ENST00000529950 MAP3K2Q9Y2U5 619 aa16.49■□□□□ 0.23
MS4A4A-204ENST00000529950 IRS4O14654 1257 aaPredicted RBP16.48■□□□□ 0.23
MS4A4A-204ENST00000529950 HSPA6P17066 643 aa16.48■□□□□ 0.23
MS4A4A-204ENST00000529950 NEXNQ0ZGT2 675 aa16.48■□□□□ 0.23
MS4A4A-204ENST00000529950 GRAPQ13588 217 aa16.48■□□□□ 0.23
MS4A4A-204ENST00000529950 ZBTB38Q8NAP3 1195 aaPredicted RBP16.48■□□□□ 0.23
MS4A4A-204ENST00000529950 GRAPLQ8TC17 118 aaPredicted RBP16.48■□□□□ 0.23
MS4A4A-204ENST00000529950 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
MS4A4A-204ENST00000529950 CWC25Q9NXE8 425 aaPredicted RBP16.48■□□□□ 0.23
MS4A4A-204ENST00000529950 ATP6V0A2Q9Y487 856 aa16.48■□□□□ 0.23
MS4A4A-204ENST00000529950 PI4KAP2A4QPH2 592 aa16.47■□□□□ 0.23
MS4A4A-204ENST00000529950 VAMP4O75379 141 aa16.47■□□□□ 0.23
MS4A4A-204ENST00000529950 DDNO94850 711 aaPredicted RBP16.47■□□□□ 0.23
MS4A4A-204ENST00000529950 SF3B3Q15393 1217 aaKnown RBP16.47■□□□□ 0.23
MS4A4A-204ENST00000529950 PI4KAP1Q8N8J0 262 aa16.47■□□□□ 0.23
MS4A4A-204ENST00000529950 DICER1Q9UPY3 1922 aaKnown RBP16.47■□□□□ 0.23
MS4A4A-204ENST00000529950 G2E3Q7L622 706 aa16.46■□□□□ 0.23
MS4A4A-204ENST00000529950 TMC4Q7Z404 712 aa16.46■□□□□ 0.23
MS4A4A-204ENST00000529950 SP8Q8IXZ3 490 aa16.46■□□□□ 0.23
MS4A4A-204ENST00000529950 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
MS4A4A-204ENST00000529950 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
MS4A4A-204ENST00000529950 PCCAP05165 728 aaPredicted RBP16.45■□□□□ 0.22
MS4A4A-204ENST00000529950 FSTL1Q12841 308 aa16.45■□□□□ 0.22
MS4A4A-204ENST00000529950 FLIIQ13045 1269 aa16.45■□□□□ 0.22
MS4A4A-204ENST00000529950 LARGE2Q8N3Y3 721 aa16.45■□□□□ 0.22
MS4A4A-204ENST00000529950 SUPT20HQ8NEM7 779 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms