RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
PACS1-209ENST00000529757 LRRC4BQ9NT99 713 aa20.61■□□□□ 0.89
PACS1-209ENST00000529757 ZNF652Q9Y2D9 606 aa20.61■□□□□ 0.89
PACS1-209ENST00000529757 RAB11FIP3O75154 756 aa20.61■□□□□ 0.89
PACS1-209ENST00000529757 HSP90AB4PQ58FF6 505 aa20.61■□□□□ 0.89
PACS1-209ENST00000529757 RTL5Q5HYW3 569 aaPredicted RBP20.61■□□□□ 0.89
PACS1-209ENST00000529757 ZBTB38Q8NAP3 1195 aaPredicted RBP20.61■□□□□ 0.89
PACS1-209ENST00000529757 RTCBQ9Y3I0 505 aaKnown RBP20.61■□□□□ 0.89
PACS1-209ENST00000529757 BCORQ6W2J9 1755 aa20.6■□□□□ 0.89
PACS1-209ENST00000529757 LRRCC1Q9C099 1032 aa20.6■□□□□ 0.89
PACS1-209ENST00000529757 NOP58Q9Y2X3 529 aaKnown RBP20.6■□□□□ 0.89
PACS1-209ENST00000529757 RGL2O15211 777 aa20.59■□□□□ 0.89
PACS1-209ENST00000529757 HMGB2P26583 209 aaKnown RBP20.59■□□□□ 0.89
PACS1-209ENST00000529757 AK7Q96M32 723 aa20.59■□□□□ 0.89
PACS1-209ENST00000529757 SMARCA5O60264 1052 aaPredicted RBP20.58■□□□□ 0.89
PACS1-209ENST00000529757 FOXO4P98177 505 aa20.58■□□□□ 0.89
PACS1-209ENST00000529757 CLEC4GQ6UXB4 293 aa20.58■□□□□ 0.89
PACS1-209ENST00000529757 UBN2Q6ZU65 1347 aa20.58■□□□□ 0.89
PACS1-209ENST00000529757 SCN7AQ01118 1682 aa20.58■□□□□ 0.88
PACS1-209ENST00000529757 PARP10Q53GL7 1025 aa20.58■□□□□ 0.88
PACS1-209ENST00000529757 FAM89AQ96GI7 184 aa20.58■□□□□ 0.88
PACS1-209ENST00000529757 CDHR2Q9BYE9 1310 aa20.58■□□□□ 0.88
PACS1-209ENST00000529757 PLSCR1O15162 318 aa20.57■□□□□ 0.88
PACS1-209ENST00000529757 TXNRD1Q16881 649 aa20.57■□□□□ 0.88
PACS1-209ENST00000529757 LMBR1LQ6UX01 489 aa20.57■□□□□ 0.88
PACS1-209ENST00000529757 NARFQ9UHQ1 456 aa20.57■□□□□ 0.88
PACS1-209ENST00000529757 TRMT112Q9UI30 125 aaKnown RBP20.57■□□□□ 0.88
PACS1-209ENST00000529757 APBA3O96018 575 aa20.56■□□□□ 0.88
PACS1-209ENST00000529757 OS9Q13438 667 aaPredicted RBP20.56■□□□□ 0.88
PACS1-209ENST00000529757 KIF1BPQ96EK5 621 aa20.56■□□□□ 0.88
PACS1-209ENST00000529757 PLA2G12BQ9BX93 195 aa20.56■□□□□ 0.88
PACS1-209ENST00000529757 PA2G4Q9UQ80 394 aaKnown RBP20.56■□□□□ 0.88
PACS1-209ENST00000529757 BCL11AQ9H165 835 aa20.55■□□□□ 0.88
PACS1-209ENST00000529757 NIP7Q9Y221 180 aaKnown RBP eCLIP20.55■□□□□ 0.88
PACS1-209ENST00000529757 ZPR1O75312 459 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 FAM161AQ3B820 660 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 SMIM5Q71RC9 77 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 ERC1Q8IUD2 1116 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 C16orf71Q8IYS4 520 aaPredicted RBP20.54■□□□□ 0.88
PACS1-209ENST00000529757 RHPN1Q8TCX5 695 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 ADRA2BP18089 450 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 RFX5P48382 616 aaPredicted RBP20.54■□□□□ 0.88
PACS1-209ENST00000529757 TRAPPC3LQ5T215 181 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 AMIGO3Q86WK7 504 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 PROM2Q8N271 834 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 ARHGEF1Q92888 912 aaKnown RBP20.54■□□□□ 0.88
PACS1-209ENST00000529757 UTP14AQ9BVJ6 771 aaKnown RBP20.54■□□□□ 0.88
PACS1-209ENST00000529757 COPRSQ9NQ92 184 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 CHMP3Q9Y3E7 222 aa20.54■□□□□ 0.88
PACS1-209ENST00000529757 TNS1Q9HBL0 1735 aaKnown RBP20.53■□□□□ 0.88
PACS1-209ENST00000529757 G3BP1Q13283 466 aaKnown RBP eCLIP20.53■□□□□ 0.88
PACS1-209ENST00000529757 SUSD4Q5VX71 490 aa20.53■□□□□ 0.88
PACS1-209ENST00000529757 PLEKHM2Q8IWE5 1019 aa20.53■□□□□ 0.88
PACS1-209ENST00000529757 BACH2Q9BYV9 841 aa20.53■□□□□ 0.88
PACS1-209ENST00000529757 IRS4O14654 1257 aaPredicted RBP20.52■□□□□ 0.88
PACS1-209ENST00000529757 USPL1Q5W0Q7 1092 aa20.52■□□□□ 0.88
PACS1-209ENST00000529757 SYNE4Q8N205 404 aa20.52■□□□□ 0.88
PACS1-209ENST00000529757 SRP68Q9UHB9 627 aaKnown RBP20.52■□□□□ 0.88
PACS1-209ENST00000529757 SH3TC1Q8TE82 1336 aa20.52■□□□□ 0.87
PACS1-209ENST00000529757 PHF14O94880 888 aa20.51■□□□□ 0.87
PACS1-209ENST00000529757 RFC4P35249 363 aa20.51■□□□□ 0.87
PACS1-209ENST00000529757 PTPN12Q05209 780 aaKnown RBP20.51■□□□□ 0.87
PACS1-209ENST00000529757 OTUD7AQ8TE49 926 aaPredicted RBP20.51■□□□□ 0.87
PACS1-209ENST00000529757 BCL2L12Q9HB09 334 aa20.51■□□□□ 0.87
PACS1-209ENST00000529757 C4AP0C0L4 1744 aa20.51■□□□□ 0.87
PACS1-209ENST00000529757 C8orf34Q49A92 452 aa20.51■□□□□ 0.87
PACS1-209ENST00000529757 KLHDC4Q8TBB5 520 aa20.51■□□□□ 0.87
PACS1-209ENST00000529757 SIL1Q9H173 461 aa20.51■□□□□ 0.87
PACS1-209ENST00000529757 IL1RAPL2Q9NP60 686 aa20.51■□□□□ 0.87
PACS1-209ENST00000529757 UBR3Q6ZT12 1888 aa20.5■□□□□ 0.87
PACS1-209ENST00000529757 USP42Q9H9J4 1324 aaKnown RBP20.5■□□□□ 0.87
PACS1-209ENST00000529757 NTSR2O95665 410 aa20.5■□□□□ 0.87
PACS1-209ENST00000529757 CSF1RP07333 972 aa20.5■□□□□ 0.87
PACS1-209ENST00000529757 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.49■□□□□ 0.87
PACS1-209ENST00000529757 FAM177BA6PVY3 158 aa20.49■□□□□ 0.87
PACS1-209ENST00000529757 PDE8AO60658 829 aa20.49■□□□□ 0.87
PACS1-209ENST00000529757 HSP90B1P14625 803 aaKnown RBP20.49■□□□□ 0.87
PACS1-209ENST00000529757 SSFA2P28290 1259 aa20.49■□□□□ 0.87
PACS1-209ENST00000529757 CTSWP56202 376 aa20.49■□□□□ 0.87
PACS1-209ENST00000529757 BMP2KLQ5H9B9 411 aa20.49■□□□□ 0.87
PACS1-209ENST00000529757 RGPD3A6NKT7 1758 aaPredicted RBP20.49■□□□□ 0.87
PACS1-209ENST00000529757 RGPD4Q7Z3J3 1758 aa20.49■□□□□ 0.87
PACS1-209ENST00000529757 TBC1D9BQ66K14 1250 aa20.48■□□□□ 0.87
PACS1-209ENST00000529757 SALL3Q9BXA9 1300 aa20.48■□□□□ 0.87
PACS1-209ENST00000529757 SASH1O94885 1247 aa20.48■□□□□ 0.87
PACS1-209ENST00000529757 CCDC57Q2TAC2 916 aa20.48■□□□□ 0.87
PACS1-209ENST00000529757 MX1P20591 662 aa20.47■□□□□ 0.87
PACS1-209ENST00000529757 PDE1AP54750 535 aa20.47■□□□□ 0.87
PACS1-209ENST00000529757 BICDL1Q6ZP65 573 aa20.47■□□□□ 0.87
PACS1-209ENST00000529757 CLASRPQ8N2M8 674 aaKnown RBP20.47■□□□□ 0.87
PACS1-209ENST00000529757 TTLL11Q8NHH1 800 aa20.47■□□□□ 0.87
PACS1-209ENST00000529757 SETDB2Q96T68 719 aa20.47■□□□□ 0.87
PACS1-209ENST00000529757 OSBPL3Q9H4L5 887 aa20.47■□□□□ 0.87
PACS1-209ENST00000529757 TTC22Q5TAA0 569 aa20.46■□□□□ 0.87
PACS1-209ENST00000529757 MYH3P11055 1940 aa20.45■□□□□ 0.86
PACS1-209ENST00000529757 IFIT5Q13325 482 aaKnown RBP20.45■□□□□ 0.86
PACS1-209ENST00000529757 COL24A1Q17RW2 1714 aa20.45■□□□□ 0.86
PACS1-209ENST00000529757 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
PACS1-209ENST00000529757 CCDC85AQ96PX6 553 aaPredicted RBP20.45■□□□□ 0.86
PACS1-209ENST00000529757 NYXQ9GZU5 481 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms