RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 TJP1Q07157 1748 aa20.42■□□□□ 0.86
CAPRIN1-207ENST00000529307 COL15A1P39059 1388 aa20.42■□□□□ 0.86
CAPRIN1-207ENST00000529307 KCNQ2O43526 872 aa20.42■□□□□ 0.86
CAPRIN1-207ENST00000529307 HSP90AB4PQ58FF6 505 aa20.42■□□□□ 0.86
CAPRIN1-207ENST00000529307 KLHDC4Q8TBB5 520 aa20.42■□□□□ 0.86
CAPRIN1-207ENST00000529307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.42■□□□□ 0.86
CAPRIN1-207ENST00000529307 RABL6Q3YEC7 729 aaPredicted RBP20.41■□□□□ 0.86
CAPRIN1-207ENST00000529307 CWC25Q9NXE8 425 aaPredicted RBP20.41■□□□□ 0.86
CAPRIN1-207ENST00000529307 ESPNB1AK53 854 aa20.41■□□□□ 0.86
CAPRIN1-207ENST00000529307 OS9Q13438 667 aaPredicted RBP20.41■□□□□ 0.86
CAPRIN1-207ENST00000529307 PDE4CQ08493 712 aa20.4■□□□□ 0.86
CAPRIN1-207ENST00000529307 ISCA1Q9BUE6 129 aa20.4■□□□□ 0.86
CAPRIN1-207ENST00000529307 RFX5P48382 616 aaPredicted RBP20.39■□□□□ 0.86
CAPRIN1-207ENST00000529307 SASH1O94885 1247 aa20.39■□□□□ 0.85
CAPRIN1-207ENST00000529307 TCIRG1Q13488 830 aa20.39■□□□□ 0.85
CAPRIN1-207ENST00000529307 CCDC191Q8NCU4 936 aa20.39■□□□□ 0.85
CAPRIN1-207ENST00000529307 TUBGCP6Q96RT7 1819 aa20.39■□□□□ 0.85
CAPRIN1-207ENST00000529307 FOXO4P98177 505 aa20.38■□□□□ 0.85
CAPRIN1-207ENST00000529307 PANK2Q9BZ23 570 aa20.38■□□□□ 0.85
CAPRIN1-207ENST00000529307 BECN1Q14457 450 aa20.38■□□□□ 0.85
CAPRIN1-207ENST00000529307 HLFQ16534 295 aa20.38■□□□□ 0.85
CAPRIN1-207ENST00000529307 SIL1Q9H173 461 aa20.38■□□□□ 0.85
CAPRIN1-207ENST00000529307 MAP3K15Q6ZN16 1313 aa20.37■□□□□ 0.85
CAPRIN1-207ENST00000529307 MRE11P49959 708 aa20.37■□□□□ 0.85
CAPRIN1-207ENST00000529307 KIF6Q6ZMV9 814 aa20.37■□□□□ 0.85
CAPRIN1-207ENST00000529307 PI4K2BQ8TCG2 481 aa20.37■□□□□ 0.85
CAPRIN1-207ENST00000529307 AOX1Q06278 1338 aa20.37■□□□□ 0.85
CAPRIN1-207ENST00000529307 LOC102724428A0A0B4J2F2 783 aa20.37■□□□□ 0.85
CAPRIN1-207ENST00000529307 RBM25P49756 843 aaKnown RBP20.37■□□□□ 0.85
CAPRIN1-207ENST00000529307 SIK1P57059 783 aa20.37■□□□□ 0.85
CAPRIN1-207ENST00000529307 ARXQ96QS3 562 aa20.37■□□□□ 0.85
CAPRIN1-207ENST00000529307 PTPN12Q05209 780 aaKnown RBP20.36■□□□□ 0.85
CAPRIN1-207ENST00000529307 ITPK1Q13572 414 aa20.36■□□□□ 0.85
CAPRIN1-207ENST00000529307 ERC1Q8IUD2 1116 aa20.36■□□□□ 0.85
CAPRIN1-207ENST00000529307 PALLDQ8WX93 1383 aa20.36■□□□□ 0.85
CAPRIN1-207ENST00000529307 ATP6V1AP38606 617 aa20.36■□□□□ 0.85
CAPRIN1-207ENST00000529307 G3BP1Q13283 466 aaKnown RBP eCLIP20.36■□□□□ 0.857e-7■■□□□ 12.3
CAPRIN1-207ENST00000529307 INTS5Q6P9B9 1019 aaKnown RBP20.36■□□□□ 0.85
CAPRIN1-207ENST00000529307 LMBR1LQ6UX01 489 aa20.36■□□□□ 0.85
CAPRIN1-207ENST00000529307 PTF1AQ7RTS3 328 aa20.36■□□□□ 0.85
CAPRIN1-207ENST00000529307 COPRSQ9NQ92 184 aa20.36■□□□□ 0.85
CAPRIN1-207ENST00000529307 TRIM28Q13263 835 aaKnown RBP20.35■□□□□ 0.85
CAPRIN1-207ENST00000529307 GIGYF2Q6Y7W6 1299 aaKnown RBP20.35■□□□□ 0.85
CAPRIN1-207ENST00000529307 CLASRPQ8N2M8 674 aaKnown RBP20.34■□□□□ 0.85
CAPRIN1-207ENST00000529307 USP42Q9H9J4 1324 aaKnown RBP20.34■□□□□ 0.85
CAPRIN1-207ENST00000529307 IL6STP40189 918 aaPredicted RBP20.34■□□□□ 0.85
CAPRIN1-207ENST00000529307 MEX3CQ5U5Q3 659 aaKnown RBP20.34■□□□□ 0.85
CAPRIN1-207ENST00000529307 EAF2Q96CJ1 260 aaPredicted RBP20.33■□□□□ 0.85
CAPRIN1-207ENST00000529307 THSD7AQ9UPZ6 1657 aa20.33■□□□□ 0.85
CAPRIN1-207ENST00000529307 MAP7D2Q96T17 732 aa20.33■□□□□ 0.84
CAPRIN1-207ENST00000529307 TBC1D2BQ9UPU7 963 aa20.33■□□□□ 0.84
CAPRIN1-207ENST00000529307 TRIM6-TRIM34B2RNG4 842 aa20.32■□□□□ 0.84
CAPRIN1-207ENST00000529307 CRKLP46109 303 aaKnown RBP20.32■□□□□ 0.84
CAPRIN1-207ENST00000529307 RILPL2Q969X0 211 aa20.32■□□□□ 0.84
CAPRIN1-207ENST00000529307 KIF2CQ99661 725 aa20.32■□□□□ 0.84
CAPRIN1-207ENST00000529307 AFF2P51816 1311 aa20.32■□□□□ 0.84
CAPRIN1-207ENST00000529307 MAP4K4O95819 1239 aaPredicted RBP20.32■□□□□ 0.84
CAPRIN1-207ENST00000529307 EIF5P55010 431 aaKnown RBP20.32■□□□□ 0.84
CAPRIN1-207ENST00000529307 AACSQ86V21 672 aa20.32■□□□□ 0.84
CAPRIN1-207ENST00000529307 ANTXR1Q9H6X2 564 aa20.32■□□□□ 0.84
CAPRIN1-207ENST00000529307 CCDC87Q9NVE4 849 aa20.32■□□□□ 0.84
CAPRIN1-207ENST00000529307 GPTP24298 496 aa20.31■□□□□ 0.84
CAPRIN1-207ENST00000529307 FAM182BQ5T319 152 aa20.31■□□□□ 0.84
CAPRIN1-207ENST00000529307 DZIP3Q86Y13 1208 aaKnown RBP20.3■□□□□ 0.84
CAPRIN1-207ENST00000529307 FAM89AQ96GI7 184 aa20.3■□□□□ 0.84
CAPRIN1-207ENST00000529307 GJD4Q96KN9 370 aaPredicted RBP20.3■□□□□ 0.84
CAPRIN1-207ENST00000529307 TLR7Q9NYK1 1049 aaKnown RBP20.3■□□□□ 0.84
CAPRIN1-207ENST00000529307 ISY1Q9ULR0 285 aaKnown RBP20.3■□□□□ 0.84
CAPRIN1-207ENST00000529307 SYNE4Q8N205 404 aa20.3■□□□□ 0.84
CAPRIN1-207ENST00000529307 TTC41PQ6P2S7 1318 aa20.3■□□□□ 0.84
CAPRIN1-207ENST00000529307 IFIT2P09913 472 aaKnown RBP20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 NLRP10Q86W26 655 aa20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 SMARCC1Q92922 1105 aaPredicted RBP20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 USP26Q9BXU7 913 aa20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 TBC1D2Q9BYX2 928 aa20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 CCDC8Q9H0W5 538 aaPredicted RBP20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 CHMP3Q9Y3E7 222 aa20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 MYH14Q7Z406 1995 aaKnown RBP20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 CICQ96RK0 1608 aaPredicted RBP20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 PCCAP05165 728 aaPredicted RBP20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 CHMLP26374 656 aa20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 CASC1Q6TDU7 716 aa20.29■□□□□ 0.84
CAPRIN1-207ENST00000529307 ECHDC1Q9NTX5 307 aa20.28■□□□□ 0.84
CAPRIN1-207ENST00000529307 ERVV-1B6SEH8 477 aa20.28■□□□□ 0.84
CAPRIN1-207ENST00000529307 KCNQ4P56696 695 aa20.28■□□□□ 0.84
CAPRIN1-207ENST00000529307 TFCP2Q12800 502 aa20.28■□□□□ 0.84
CAPRIN1-207ENST00000529307 ZBTB38Q8NAP3 1195 aaPredicted RBP20.28■□□□□ 0.84
CAPRIN1-207ENST00000529307 RREB1Q92766 1687 aa20.28■□□□□ 0.84
CAPRIN1-207ENST00000529307 SMAP1Q8IYB5 467 aaPredicted RBP20.27■□□□□ 0.84
CAPRIN1-207ENST00000529307 SLKQ9H2G2 1235 aaPredicted RBP20.27■□□□□ 0.84
CAPRIN1-207ENST00000529307 ATRNO75882 1429 aa20.26■□□□□ 0.83
CAPRIN1-207ENST00000529307 UBN2Q6ZU65 1347 aa20.26■□□□□ 0.83
CAPRIN1-207ENST00000529307 ERC2O15083 957 aa20.26■□□□□ 0.83
CAPRIN1-207ENST00000529307 GLRX3O76003 335 aaKnown RBP20.26■□□□□ 0.83
CAPRIN1-207ENST00000529307 TERF1P54274 439 aa20.26■□□□□ 0.83
CAPRIN1-207ENST00000529307 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
CAPRIN1-207ENST00000529307 ATG9AQ7Z3C6 839 aa20.26■□□□□ 0.83
CAPRIN1-207ENST00000529307 ZNF594Q96JF6 807 aaPredicted RBP20.26■□□□□ 0.83
CAPRIN1-207ENST00000529307 ESYT1Q9BSJ8 1104 aa20.26■□□□□ 0.83
CAPRIN1-207ENST00000529307 NUP98P52948 1817 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms