RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 MTFR1LQ9H019 292 aa14.49□□□□□ -0.09
CAPN1-217ENST00000529133 CWC25Q9NXE8 425 aaPredicted RBP14.49□□□□□ -0.09
CAPN1-217ENST00000529133 MMP10P09238 476 aa14.48□□□□□ -0.09
CAPN1-217ENST00000529133 GCKRQ14397 625 aa14.48□□□□□ -0.09
CAPN1-217ENST00000529133 SUSD4Q5VX71 490 aa14.48□□□□□ -0.09
CAPN1-217ENST00000529133 POLRMTO00411 1230 aaKnown RBP14.47□□□□□ -0.09
CAPN1-217ENST00000529133 NTSR2O95665 410 aa14.47□□□□□ -0.09
CAPN1-217ENST00000529133 ITPRIPQ8IWB1 547 aa14.47□□□□□ -0.09
CAPN1-217ENST00000529133 COG6Q9Y2V7 657 aa14.47□□□□□ -0.09
CAPN1-217ENST00000529133 FAM177BA6PVY3 158 aa14.46□□□□□ -0.09
CAPN1-217ENST00000529133 MVPQ14764 893 aaKnown RBP14.46□□□□□ -0.09
CAPN1-217ENST00000529133 PPP1R42Q7Z4L9 355 aa14.46□□□□□ -0.09
CAPN1-217ENST00000529133 UTP14AQ9BVJ6 771 aaKnown RBP14.46□□□□□ -0.09
CAPN1-217ENST00000529133 ATF5Q9Y2D1 282 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-217ENST00000529133 AFDNP55196 1824 aaKnown RBP14.45□□□□□ -0.1
CAPN1-217ENST00000529133 GRM8O00222 908 aa14.45□□□□□ -0.1
CAPN1-217ENST00000529133 SERPINB2P05120 415 aa14.45□□□□□ -0.1
CAPN1-217ENST00000529133 NBPF5PQ86XG9 351 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-217ENST00000529133 TRMT112Q9UI30 125 aaKnown RBP14.45□□□□□ -0.1
CAPN1-217ENST00000529133 PARP3Q9Y6F1 533 aa14.45□□□□□ -0.1
CAPN1-217ENST00000529133 UTYO14607 1347 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 NRXN2Q9P2S2 1712 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 H7C1W4 665 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 PCCAP05165 728 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-217ENST00000529133 CASP7P55210 303 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 NUTM1Q86Y26 1132 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 CNBD1Q8NA66 436 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 ZBTB38Q8NAP3 1195 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-217ENST00000529133 JARID2Q92833 1246 aaPredicted RBP14.44□□□□□ -0.1
CAPN1-217ENST00000529133 CRBNQ96SW2 442 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 MEIS3Q99687 375 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 SGIP1Q9BQI5 828 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 NYXQ9GZU5 481 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 USP44Q9H0E7 712 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 ABCC12Q96J65 1359 aa14.44□□□□□ -0.1
CAPN1-217ENST00000529133 SH3TC1Q8TE82 1336 aa14.43□□□□□ -0.1
CAPN1-217ENST00000529133 NBPF7P0C2Y1 421 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-217ENST00000529133 PTGER2P43116 358 aa14.43□□□□□ -0.1
CAPN1-217ENST00000529133 IRX6P78412 446 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-217ENST00000529133 ERFEQ4G0M1 354 aa14.43□□□□□ -0.1
CAPN1-217ENST00000529133 RTL5Q5HYW3 569 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-217ENST00000529133 PRR5LQ6MZQ0 368 aa14.43□□□□□ -0.1
CAPN1-217ENST00000529133 TPTE2Q6XPS3 522 aa14.43□□□□□ -0.1
CAPN1-217ENST00000529133 UBE3BQ7Z3V4 1068 aa14.43□□□□□ -0.1
CAPN1-217ENST00000529133 SYNE4Q8N205 404 aa14.43□□□□□ -0.1
CAPN1-217ENST00000529133 FAM89AQ96GI7 184 aa14.43□□□□□ -0.1
CAPN1-217ENST00000529133 C9orf78Q9NZ63 289 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-217ENST00000529133 DDX19BQ9UMR2 479 aa14.43□□□□□ -0.1
CAPN1-217ENST00000529133 CDHR2Q9BYE9 1310 aa14.42□□□□□ -0.1
CAPN1-217ENST00000529133 ZBTB7BO15156 539 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-217ENST00000529133 POLD1P28340 1107 aa14.42□□□□□ -0.1
CAPN1-217ENST00000529133 CCDC24Q8N4L8 307 aa14.42□□□□□ -0.1
CAPN1-217ENST00000529133 RIC1Q4ADV7 1423 aa14.41□□□□□ -0.1
CAPN1-217ENST00000529133 NPHP1O15259 732 aa14.41□□□□□ -0.1
CAPN1-217ENST00000529133 UBTFL1P0CB47 393 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-217ENST00000529133 GTF2E1P29083 439 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-217ENST00000529133 SPON1Q9HCB6 807 aa14.41□□□□□ -0.1
CAPN1-217ENST00000529133 C10orf71Q711Q0 1435 aa14.41□□□□□ -0.1
CAPN1-217ENST00000529133 IRS4O14654 1257 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-217ENST00000529133 GNAI3P08754 354 aa14.4□□□□□ -0.1
CAPN1-217ENST00000529133 ST5P78524 1137 aa14.4□□□□□ -0.1
CAPN1-217ENST00000529133 SLC10A5Q5PT55 438 aa14.4□□□□□ -0.1
CAPN1-217ENST00000529133 SUCLG2Q96I99 432 aa14.4□□□□□ -0.1
CAPN1-217ENST00000529133 LAMB2P55268 1798 aa14.39□□□□□ -0.11
CAPN1-217ENST00000529133 TNRC6CQ9HCJ0 1690 aaKnown RBP14.39□□□□□ -0.11
CAPN1-217ENST00000529133 HCLS1P14317 486 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-217ENST00000529133 EXOC6Q8TAG9 804 aa14.39□□□□□ -0.11
CAPN1-217ENST00000529133 KAZALD1Q96I82 304 aa14.39□□□□□ -0.11
CAPN1-217ENST00000529133 PLA2G12BQ9BX93 195 aa14.39□□□□□ -0.11
CAPN1-217ENST00000529133 ZBTB40Q9NUA8 1239 aa14.39□□□□□ -0.11
CAPN1-217ENST00000529133 DDX60Q8IY21 1712 aaKnown RBP14.38□□□□□ -0.11
CAPN1-217ENST00000529133 EPHA10Q5JZY3 1008 aa14.38□□□□□ -0.11
CAPN1-217ENST00000529133 C3orf67Q6ZVT6 689 aa14.38□□□□□ -0.11
CAPN1-217ENST00000529133 CHMP4BQ9H444 224 aaKnown RBP14.38□□□□□ -0.11
CAPN1-217ENST00000529133 C1orf115Q9H7X2 142 aa14.38□□□□□ -0.11
CAPN1-217ENST00000529133 LRRFIP2Q9Y608 721 aaKnown RBP14.38□□□□□ -0.11
CAPN1-217ENST00000529133 PDE8AO60658 829 aa14.37□□□□□ -0.11
CAPN1-217ENST00000529133 GNAI2P04899 355 aa14.37□□□□□ -0.11
CAPN1-217ENST00000529133 HSP90B1P14625 803 aaKnown RBP14.37□□□□□ -0.11
CAPN1-217ENST00000529133 FOXO4P98177 505 aa14.37□□□□□ -0.11
CAPN1-217ENST00000529133 ANKRD44Q8N8A2 993 aa14.37□□□□□ -0.11
CAPN1-217ENST00000529133 BRIP1Q9BX63 1249 aa14.37□□□□□ -0.11
CAPN1-217ENST00000529133 NEFLP07196 543 aa14.36□□□□□ -0.11
CAPN1-217ENST00000529133 CTSWP56202 376 aa14.36□□□□□ -0.11
CAPN1-217ENST00000529133 BICC1Q9H694 974 aaKnown RBP14.36□□□□□ -0.11
CAPN1-217ENST00000529133 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
CAPN1-217ENST00000529133 ANKRD31Q8N7Z5 1873 aa14.35□□□□□ -0.11
CAPN1-217ENST00000529133 KLRG2A4D1S0 409 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-217ENST00000529133 RABL6Q3YEC7 729 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-217ENST00000529133 NLRP3Q96P20 1036 aa14.35□□□□□ -0.11
CAPN1-217ENST00000529133 CSF1RP07333 972 aa14.34□□□□□ -0.11
CAPN1-217ENST00000529133 PDE6BP35913 854 aa14.34□□□□□ -0.11
CAPN1-217ENST00000529133 SF3B3Q15393 1217 aaKnown RBP14.34□□□□□ -0.11
CAPN1-217ENST00000529133 CRY2Q49AN0 593 aa14.34□□□□□ -0.11
CAPN1-217ENST00000529133 LMBR1LQ6UX01 489 aa14.34□□□□□ -0.11
CAPN1-217ENST00000529133 TTLL11Q8NHH1 800 aa14.34□□□□□ -0.11
CAPN1-217ENST00000529133 LRP5O75197 1615 aa14.33□□□□□ -0.11
CAPN1-217ENST00000529133 COL11A2P13942 1736 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-217ENST00000529133 MTX1Q13505 466 aa14.33□□□□□ -0.12
CAPN1-217ENST00000529133 AAMPQ13685 434 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms