RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 PRAMEF22A3QJZ6 481 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 NEURL1BA8MQ27 555 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 SLC27A2O14975 620 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 CPA1P15085 419 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 GJB2P29033 226 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 RFX5P48382 616 aaPredicted RBP10.02□□□□□ -0.81
CSTF3-208ENST00000528865 NMIQ13287 307 aaPredicted RBP10.02□□□□□ -0.81
CSTF3-208ENST00000528865 ANKRD1Q15327 319 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 ME3Q16798 604 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 USPL1Q5W0Q7 1092 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 KRT28Q7Z3Y7 464 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 LRP10Q7Z4F1 713 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 TICAM2Q86XR7 235 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 CCDC83Q8IWF9 413 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.02□□□□□ -0.81
CSTF3-208ENST00000528865 ZNF142P52746 1687 aaPredicted RBP10.02□□□□□ -0.81
CSTF3-208ENST00000528865 ABCC6O95255 1503 aa10.02□□□□□ -0.81
CSTF3-208ENST00000528865 TMEM94Q12767 1356 aa10.01□□□□□ -0.81
CSTF3-208ENST00000528865 RFX7Q2KHR2 1363 aa10.01□□□□□ -0.81
CSTF3-208ENST00000528865 MED23Q9ULK4 1368 aa10.01□□□□□ -0.81
CSTF3-208ENST00000528865 NPHP4O75161 1426 aaPredicted RBP10.01□□□□□ -0.81
CSTF3-208ENST00000528865 ATP5JP18859 108 aa10.01□□□□□ -0.81
CSTF3-208ENST00000528865 GCKRQ14397 625 aa10.01□□□□□ -0.81
CSTF3-208ENST00000528865 RABL6Q3YEC7 729 aaPredicted RBP10.01□□□□□ -0.81
CSTF3-208ENST00000528865 ZNF790Q6PG37 636 aa10.01□□□□□ -0.81
CSTF3-208ENST00000528865 RNF214Q8ND24 703 aa10.01□□□□□ -0.81
CSTF3-208ENST00000528865 SLC52A2Q9HAB3 445 aa10.01□□□□□ -0.81
CSTF3-208ENST00000528865 HMG20BQ9P0W2 317 aa10.01□□□□□ -0.81
CSTF3-208ENST00000528865 TPCN1Q9ULQ1 816 aa10.01□□□□□ -0.81
CSTF3-208ENST00000528865 TRPM3Q9HCF6 1732 aaPredicted RBP10.01□□□□□ -0.81
CSTF3-208ENST00000528865 ZBTB7CA1YPR0 619 aa10□□□□□ -0.81
CSTF3-208ENST00000528865 TAF5LO75529 589 aa10□□□□□ -0.81
CSTF3-208ENST00000528865 PHKG2P15735 406 aa10□□□□□ -0.81
CSTF3-208ENST00000528865 PDCP20941 246 aa10□□□□□ -0.81
CSTF3-208ENST00000528865 RPS6KB1P23443 525 aa10□□□□□ -0.81
CSTF3-208ENST00000528865 RNF20Q5VTR2 975 aa10□□□□□ -0.81
CSTF3-208ENST00000528865 RIC3Q7Z5B4 369 aa10□□□□□ -0.81
CSTF3-208ENST00000528865 RBM33Q96EV2 1170 aaKnown RBP10□□□□□ -0.81
CSTF3-208ENST00000528865 FAM227BQ96M60 508 aa10□□□□□ -0.81
CSTF3-208ENST00000528865 CCDC8Q9H0W5 538 aaPredicted RBP10□□□□□ -0.81
CSTF3-208ENST00000528865 ELP1O95163 1332 aa10□□□□□ -0.81
CSTF3-208ENST00000528865 KDM4AO75164 1064 aa9.99□□□□□ -0.81
CSTF3-208ENST00000528865 DNM1Q05193 864 aaKnown RBP9.99□□□□□ -0.81
CSTF3-208ENST00000528865 NEXNQ0ZGT2 675 aa9.99□□□□□ -0.81
CSTF3-208ENST00000528865 KRT32Q14532 448 aa9.99□□□□□ -0.81
CSTF3-208ENST00000528865 HSP90AA2PQ14568 343 aaPredicted RBP9.99□□□□□ -0.81
CSTF3-208ENST00000528865 EPHA10Q5JZY3 1008 aa9.99□□□□□ -0.81
CSTF3-208ENST00000528865 XAGE3Q8WTP9 111 aa9.99□□□□□ -0.81
CSTF3-208ENST00000528865 LARP6Q9BRS8 491 aaKnown RBP9.99□□□□□ -0.81
CSTF3-208ENST00000528865 BOLA2Q9H3K6 86 aa9.99□□□□□ -0.81
CSTF3-208ENST00000528865 ERBB3P21860 1342 aa9.99□□□□□ -0.81
CSTF3-208ENST00000528865 NPHP3Q7Z494 1330 aa9.99□□□□□ -0.81
CSTF3-208ENST00000528865 TCHHQ07283 1943 aa9.99□□□□□ -0.81
CSTF3-208ENST00000528865 SETD1BQ9UPS6 1966 aaKnown RBP9.99□□□□□ -0.81
CSTF3-208ENST00000528865 KDM6AO15550 1401 aaPredicted RBP9.99□□□□□ -0.81
CSTF3-208ENST00000528865 C1orf167Q5SNV9 1468 aa9.98□□□□□ -0.81
CSTF3-208ENST00000528865 A0A0D9SFI3 127 aa9.98□□□□□ -0.81
CSTF3-208ENST00000528865 SNRPA1P09661 255 aaKnown RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 PRKCSHP14314 528 aaPredicted RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 TATP17735 454 aaPredicted RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 CASP7P55210 303 aa9.98□□□□□ -0.81
CSTF3-208ENST00000528865 XPCQ01831 940 aaPredicted RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 PTPN12Q05209 780 aaKnown RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 TOB2Q14106 344 aaPredicted RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 FOXD4L6Q3SYB3 417 aaPredicted RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 LARP1BQ659C4 914 aaKnown RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 BLOC1S2Q6QNY1 142 aa9.98□□□□□ -0.81
CSTF3-208ENST00000528865 FOXD4L3Q6VB84 417 aaPredicted RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 ANKRD13DQ6ZTN6 518 aa9.98□□□□□ -0.81
CSTF3-208ENST00000528865 COPS6Q7L5N1 327 aa9.98□□□□□ -0.81
CSTF3-208ENST00000528865 IFNL2Q8IZJ0 200 aa9.98□□□□□ -0.81
CSTF3-208ENST00000528865 PDCL3Q9H2J4 239 aa9.98□□□□□ -0.81
CSTF3-208ENST00000528865 TLR7Q9NYK1 1049 aaKnown RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 R3HCC1Q9Y3T6 440 aaKnown RBP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.98□□□□□ -0.81
CSTF3-208ENST00000528865 KIF1AQ12756 1690 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 FIBPO43427 364 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 ADCY5O95622 1261 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 TPM3P06753 285 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 KRT85P78386 507 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 AIMP1Q12904 312 aaKnown RBP9.97□□□□□ -0.81
CSTF3-208ENST00000528865 TNNI3KQ59H18 835 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 SASS6Q6UVJ0 657 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 TTC6Q86TZ1 520 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 NECAB1Q8N987 351 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 RAPGEF4Q8WZA2 1011 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 MYD88Q99836 296 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 FSD1Q9BTV5 496 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 C19orf44Q9H6X5 657 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 FPGT-TNNI3KV9GXZ4 949 aa9.97□□□□□ -0.81
CSTF3-208ENST00000528865 SCN11AQ9UI33 1791 aa9.96□□□□□ -0.81
CSTF3-208ENST00000528865 HCLS1P14317 486 aaPredicted RBP9.96□□□□□ -0.82
CSTF3-208ENST00000528865 KCNJ4P48050 445 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 KIAA2012Q0VF49 1180 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 SLC39A6Q13433 755 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 RBM43Q6ZSC3 357 aaKnown RBP9.96□□□□□ -0.82
CSTF3-208ENST00000528865 NFATC2IPQ8NCF5 419 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 PIBF1Q8WXW3 757 aa9.96□□□□□ -0.82
CSTF3-208ENST00000528865 ZNF496Q96IT1 587 aaPredicted RBP9.96□□□□□ -0.82
CSTF3-208ENST00000528865 DCAF5Q96JK2 942 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms