RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 DNAJC10Q8IXB1 793 aa17.93■□□□□ 0.46
ECHDC1-220ENST00000528402 EAF2Q96CJ1 260 aaPredicted RBP17.93■□□□□ 0.46
ECHDC1-220ENST00000528402 RBM42Q9BTD8 480 aaKnown RBP17.93■□□□□ 0.46
ECHDC1-220ENST00000528402 CWC22Q9HCG8 908 aaKnown RBP17.93■□□□□ 0.46
ECHDC1-220ENST00000528402 ANO2Q9NQ90 1003 aa17.93■□□□□ 0.46
ECHDC1-220ENST00000528402 DIAPH3Q9NSV4 1193 aa17.92■□□□□ 0.46
ECHDC1-220ENST00000528402 SPATA31A5Q5VU36 1347 aa17.92■□□□□ 0.46
ECHDC1-220ENST00000528402 SPATA31A7Q8IWB4 1347 aa17.92■□□□□ 0.46
ECHDC1-220ENST00000528402 FRAT2O75474 233 aaPredicted RBP17.91■□□□□ 0.46
ECHDC1-220ENST00000528402 LMBR1LQ6UX01 489 aa17.91■□□□□ 0.46
ECHDC1-220ENST00000528402 PLA2G12BQ9BX93 195 aa17.91■□□□□ 0.46
ECHDC1-220ENST00000528402 ZBTB3Q9H5J0 574 aa17.91■□□□□ 0.46
ECHDC1-220ENST00000528402 MAP3K15Q6ZN16 1313 aa17.91■□□□□ 0.46
ECHDC1-220ENST00000528402 ERVV-1B6SEH8 477 aa17.9■□□□□ 0.46
ECHDC1-220ENST00000528402 CIAO1O76071 339 aa17.9■□□□□ 0.46
ECHDC1-220ENST00000528402 PCCAP05165 728 aaPredicted RBP17.9■□□□□ 0.46
ECHDC1-220ENST00000528402 CYP19A1P11511 503 aaPredicted RBP17.9■□□□□ 0.46
ECHDC1-220ENST00000528402 HSPA4P34932 840 aa17.9■□□□□ 0.46
ECHDC1-220ENST00000528402 IL15P40933 162 aaPredicted RBP17.9■□□□□ 0.46
ECHDC1-220ENST00000528402 GIGYF2Q6Y7W6 1299 aaKnown RBP17.9■□□□□ 0.46
ECHDC1-220ENST00000528402 RAD50Q92878 1312 aa17.9■□□□□ 0.46
ECHDC1-220ENST00000528402 KAT6BQ8WYB5 2073 aa17.9■□□□□ 0.46
ECHDC1-220ENST00000528402 ADAMTS2O95450 1211 aa17.89■□□□□ 0.46
ECHDC1-220ENST00000528402 ATP5JP18859 108 aa17.89■□□□□ 0.46
ECHDC1-220ENST00000528402 PTMSP20962 102 aa17.89■□□□□ 0.46
ECHDC1-220ENST00000528402 IL6STP40189 918 aaPredicted RBP17.89■□□□□ 0.46
ECHDC1-220ENST00000528402 TNNI3KQ59H18 835 aa17.89■□□□□ 0.46
ECHDC1-220ENST00000528402 SIL1Q9H173 461 aa17.89■□□□□ 0.46
ECHDC1-220ENST00000528402 FPGT-TNNI3KV9GXZ4 949 aa17.89■□□□□ 0.46
ECHDC1-220ENST00000528402 SLIT2O94813 1529 aa17.89■□□□□ 0.46
ECHDC1-220ENST00000528402 TJP1Q07157 1748 aa17.89■□□□□ 0.45
ECHDC1-220ENST00000528402 SPRYD3Q8NCJ5 442 aa17.89■□□□□ 0.45
ECHDC1-220ENST00000528402 CCDC8Q9H0W5 538 aaPredicted RBP17.89■□□□□ 0.45
ECHDC1-220ENST00000528402 CDHR2Q9BYE9 1310 aa17.88■□□□□ 0.45
ECHDC1-220ENST00000528402 RFX7Q2KHR2 1363 aa17.88■□□□□ 0.45
ECHDC1-220ENST00000528402 PRIM1P49642 420 aaKnown RBP17.88■□□□□ 0.45
ECHDC1-220ENST00000528402 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-220ENST00000528402 SNRKQ9NRH2 765 aa17.88■□□□□ 0.45
ECHDC1-220ENST00000528402 CD2BP2O95400 341 aaKnown RBP17.87■□□□□ 0.45
ECHDC1-220ENST00000528402 MAP4K4O95819 1239 aaPredicted RBP17.87■□□□□ 0.45
ECHDC1-220ENST00000528402 NUCB2P80303 420 aa17.87■□□□□ 0.45
ECHDC1-220ENST00000528402 SMARCC1Q92922 1105 aaPredicted RBP17.87■□□□□ 0.45
ECHDC1-220ENST00000528402 EYA2O00167 538 aa17.86■□□□□ 0.45
ECHDC1-220ENST00000528402 NEK4P51957 841 aa17.86■□□□□ 0.45
ECHDC1-220ENST00000528402 TFCP2Q12800 502 aa17.86■□□□□ 0.45
ECHDC1-220ENST00000528402 KLHDC4Q8TBB5 520 aa17.86■□□□□ 0.45
ECHDC1-220ENST00000528402 LSG1Q9H089 658 aaKnown RBP17.86■□□□□ 0.45
ECHDC1-220ENST00000528402 DOT1LQ8TEK3 1739 aa17.86■□□□□ 0.45
ECHDC1-220ENST00000528402 MCM4P33991 863 aa17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 DEKP35659 375 aaKnown RBP17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 CCDC57Q2TAC2 916 aa17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 CWC27Q6UX04 472 aaKnown RBP17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 JARID2Q92833 1246 aaPredicted RBP17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 SYTL4Q96C24 671 aaPredicted RBP17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 AK7Q96M32 723 aa17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 GBP4Q96PP9 640 aa17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 CHMP3Q9Y3E7 222 aa17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 CICQ96RK0 1608 aaPredicted RBP17.85■□□□□ 0.45
ECHDC1-220ENST00000528402 NUTM2BA6NNL0 878 aaPredicted RBP17.84■□□□□ 0.45
ECHDC1-220ENST00000528402 DDX11L8A8MPP1 907 aa17.84■□□□□ 0.45
ECHDC1-220ENST00000528402 NUTM2EB1AL46 878 aaPredicted RBP17.84■□□□□ 0.45
ECHDC1-220ENST00000528402 CSF1RP07333 972 aa17.84■□□□□ 0.45
ECHDC1-220ENST00000528402 PIP4K2BP78356 416 aa17.84■□□□□ 0.45
ECHDC1-220ENST00000528402 NUTM2AQ8IVF1 878 aaPredicted RBP17.84■□□□□ 0.45
ECHDC1-220ENST00000528402 JCADQ9P266 1359 aa17.84■□□□□ 0.45
ECHDC1-220ENST00000528402 ANKRD36CQ5JPF3 1778 aa17.83■□□□□ 0.45
ECHDC1-220ENST00000528402 ATG9AQ7Z3C6 839 aa17.83■□□□□ 0.45
ECHDC1-220ENST00000528402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.83■□□□□ 0.45
ECHDC1-220ENST00000528402 KCNB2Q92953 911 aa17.83■□□□□ 0.45
ECHDC1-220ENST00000528402 SLC4A9Q96Q91 983 aa17.83■□□□□ 0.45
ECHDC1-220ENST00000528402 BOLA2Q9H3K6 86 aa17.83■□□□□ 0.45
ECHDC1-220ENST00000528402 AKAP2Q9Y2D5 859 aa17.83■□□□□ 0.45
ECHDC1-220ENST00000528402 HSP90B1P14625 803 aaKnown RBP17.82■□□□□ 0.44
ECHDC1-220ENST00000528402 GSE1Q14687 1217 aa17.82■□□□□ 0.44
ECHDC1-220ENST00000528402 VPS72Q15906 364 aa17.82■□□□□ 0.44
ECHDC1-220ENST00000528402 CLEC17AQ6ZS10 378 aa17.82■□□□□ 0.44
ECHDC1-220ENST00000528402 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
ECHDC1-220ENST00000528402 DBNLQ9UJU6 430 aaKnown RBP17.82■□□□□ 0.44
ECHDC1-220ENST00000528402 ZNF330Q9Y3S2 320 aaPredicted RBP17.82■□□□□ 0.44
ECHDC1-220ENST00000528402 UBAP1LF5GYI3 381 aa17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 NLRP10Q86W26 655 aa17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 MARCH10Q8NA82 808 aaPredicted RBP17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 HAUS7Q99871 368 aa17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 FSD1Q9BTV5 496 aa17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 TM6SF1Q9BZW5 370 aa17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 CEP126Q9P2H0 1117 aa17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 CCDC9Q9Y3X0 531 aaKnown RBP17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 NUP98P52948 1817 aa17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 IFIT5Q13325 482 aaKnown RBP17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 CUL4AQ13619 759 aa17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 CCDC87Q9NVE4 849 aa17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 ZBTB1Q9Y2K1 713 aa17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.81■□□□□ 0.44
ECHDC1-220ENST00000528402 ZNF831Q5JPB2 1677 aa17.8■□□□□ 0.44
ECHDC1-220ENST00000528402 ZKSCAN1P17029 563 aaPredicted RBP17.8■□□□□ 0.44
ECHDC1-220ENST00000528402 EIF5P55010 431 aaKnown RBP17.8■□□□□ 0.44
ECHDC1-220ENST00000528402 SPATA31A6Q5VVP1 1343 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms