RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 LINS1Q8NG48 757 aa19.4■□□□□ 0.7
LTBP3-209ENST00000527792 GPBP1L1Q9HC44 474 aaPredicted RBP19.4■□□□□ 0.7
LTBP3-209ENST00000527792 WWC3Q9ULE0 1092 aa19.4■□□□□ 0.7
LTBP3-209ENST00000527792 ATP10DQ9P241 1426 aa19.4■□□□□ 0.7
LTBP3-209ENST00000527792 BCORQ6W2J9 1755 aa19.39■□□□□ 0.7
LTBP3-209ENST00000527792 CLEC4GQ6UXB4 293 aa19.39■□□□□ 0.69
LTBP3-209ENST00000527792 ALDH1L1O75891 902 aa19.38■□□□□ 0.69
LTBP3-209ENST00000527792 SCN7AQ01118 1682 aa19.38■□□□□ 0.69
LTBP3-209ENST00000527792 ZNF526Q8TF50 670 aaPredicted RBP19.38■□□□□ 0.69
LTBP3-209ENST00000527792 BCL2L12Q9HB09 334 aa19.38■□□□□ 0.69
LTBP3-209ENST00000527792 NIP7Q9Y221 180 aaKnown RBP eCLIP19.38■□□□□ 0.69
LTBP3-209ENST00000527792 NUP98P52948 1817 aa19.37■□□□□ 0.69
LTBP3-209ENST00000527792 NEURL1BA8MQ27 555 aa19.37■□□□□ 0.69
LTBP3-209ENST00000527792 IGKV5-2P06315 115 aa19.37■□□□□ 0.69
LTBP3-209ENST00000527792 ISCA1Q9BUE6 129 aa19.37■□□□□ 0.69
LTBP3-209ENST00000527792 CWC25Q9NXE8 425 aaPredicted RBP19.37■□□□□ 0.69
LTBP3-209ENST00000527792 DDX19BQ9UMR2 479 aa19.37■□□□□ 0.69
LTBP3-209ENST00000527792 FAM177BA6PVY3 158 aa19.36■□□□□ 0.69
LTBP3-209ENST00000527792 RGL2O15211 777 aa19.36■□□□□ 0.69
LTBP3-209ENST00000527792 GYS1P13807 737 aa19.36■□□□□ 0.69
LTBP3-209ENST00000527792 FKBP8Q14318 412 aa19.36■□□□□ 0.69
LTBP3-209ENST00000527792 TBC1D9BQ66K14 1250 aa19.36■□□□□ 0.69
LTBP3-209ENST00000527792 C9orf78Q9NZ63 289 aaPredicted RBP19.36■□□□□ 0.69
LTBP3-209ENST00000527792 AFDNP55196 1824 aaKnown RBP19.36■□□□□ 0.69
LTBP3-209ENST00000527792 ZNF34Q8IZ26 560 aa19.35■□□□□ 0.69
LTBP3-209ENST00000527792 CCDC191Q8NCU4 936 aa19.35■□□□□ 0.69
LTBP3-209ENST00000527792 EXOC6Q8TAG9 804 aa19.35■□□□□ 0.69
LTBP3-209ENST00000527792 SETDB2Q96T68 719 aa19.35■□□□□ 0.69
LTBP3-209ENST00000527792 CHMP4BQ9H444 224 aaKnown RBP19.35■□□□□ 0.69
LTBP3-209ENST00000527792 ANKRD36CQ5JPF3 1778 aa19.34■□□□□ 0.69
LTBP3-209ENST00000527792 GCKRQ14397 625 aa19.34■□□□□ 0.69
LTBP3-209ENST00000527792 IFFO2Q5TF58 517 aa19.34■□□□□ 0.69
LTBP3-209ENST00000527792 NLRP10Q86W26 655 aa19.34■□□□□ 0.69
LTBP3-209ENST00000527792 TRIM28Q13263 835 aaKnown RBP19.33■□□□□ 0.68
LTBP3-209ENST00000527792 PARP10Q53GL7 1025 aa19.33■□□□□ 0.68
LTBP3-209ENST00000527792 PPP1R42Q7Z4L9 355 aa19.33■□□□□ 0.68
LTBP3-209ENST00000527792 NLGN1Q8N2Q7 840 aa19.33■□□□□ 0.68
LTBP3-209ENST00000527792 JARID2Q92833 1246 aaPredicted RBP19.33■□□□□ 0.68
LTBP3-209ENST00000527792 N4BP2Q86UW6 1770 aaPredicted RBP19.32■□□□□ 0.68
LTBP3-209ENST00000527792 UBN2Q6ZU65 1347 aa19.32■□□□□ 0.68
LTBP3-209ENST00000527792 NPHP1O15259 732 aa19.32■□□□□ 0.68
LTBP3-209ENST00000527792 NFIXQ14938 502 aa19.32■□□□□ 0.68
LTBP3-209ENST00000527792 RTL5Q5HYW3 569 aaPredicted RBP19.32■□□□□ 0.68
LTBP3-209ENST00000527792 SUSD4Q5VX71 490 aa19.32■□□□□ 0.68
LTBP3-209ENST00000527792 MEIS3Q99687 375 aa19.32■□□□□ 0.68
LTBP3-209ENST00000527792 TRMT112Q9UI30 125 aaKnown RBP19.32■□□□□ 0.68
LTBP3-209ENST00000527792 CEP350Q5VT06 3117 aa19.31■□□□□ 0.68
LTBP3-209ENST00000527792 GRM8O00222 908 aa19.31■□□□□ 0.68
LTBP3-209ENST00000527792 ZBTB7BO15156 539 aaPredicted RBP19.31■□□□□ 0.68
LTBP3-209ENST00000527792 GNAI3P08754 354 aa19.31■□□□□ 0.68
LTBP3-209ENST00000527792 UBTFL1P0CB47 393 aaPredicted RBP19.31■□□□□ 0.68
LTBP3-209ENST00000527792 GTF2E1P29083 439 aaPredicted RBP19.31■□□□□ 0.68
LTBP3-209ENST00000527792 UTP14AQ9BVJ6 771 aaKnown RBP19.31■□□□□ 0.68
LTBP3-209ENST00000527792 USP44Q9H0E7 712 aa19.31■□□□□ 0.68
LTBP3-209ENST00000527792 HSPA6P17066 643 aa19.3■□□□□ 0.68
LTBP3-209ENST00000527792 UBE3BQ7Z3V4 1068 aa19.3■□□□□ 0.68
LTBP3-209ENST00000527792 MMP10P09238 476 aa19.29■□□□□ 0.68
LTBP3-209ENST00000527792 NBPF7P0C2Y1 421 aaPredicted RBP19.29■□□□□ 0.68
LTBP3-209ENST00000527792 NBPF5PQ86XG9 351 aaPredicted RBP19.29■□□□□ 0.68
LTBP3-209ENST00000527792 ZBTB38Q8NAP3 1195 aaPredicted RBP19.29■□□□□ 0.68
LTBP3-209ENST00000527792 FAM89AQ96GI7 184 aa19.29■□□□□ 0.68
LTBP3-209ENST00000527792 NYXQ9GZU5 481 aa19.29■□□□□ 0.68
LTBP3-209ENST00000527792 H7C1W4 665 aa19.28■□□□□ 0.68
LTBP3-209ENST00000527792 PCCAP05165 728 aaPredicted RBP19.28■□□□□ 0.68
LTBP3-209ENST00000527792 TM4SF1P30408 202 aa19.28■□□□□ 0.68
LTBP3-209ENST00000527792 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
LTBP3-209ENST00000527792 HDAC5Q9UQL6 1122 aa19.28■□□□□ 0.68
LTBP3-209ENST00000527792 PARP3Q9Y6F1 533 aa19.28■□□□□ 0.68
LTBP3-209ENST00000527792 CARMIL3Q8ND23 1372 aa19.28■□□□□ 0.68
LTBP3-209ENST00000527792 GNAI2P04899 355 aa19.27■□□□□ 0.68
LTBP3-209ENST00000527792 SERPINB2P05120 415 aa19.27■□□□□ 0.68
LTBP3-209ENST00000527792 TPTE2Q6XPS3 522 aa19.27■□□□□ 0.68
LTBP3-209ENST00000527792 NUTM1Q86Y26 1132 aa19.27■□□□□ 0.68
LTBP3-209ENST00000527792 SH3TC1Q8TE82 1336 aa19.26■□□□□ 0.67
LTBP3-209ENST00000527792 NTSR2O95665 410 aa19.26■□□□□ 0.67
LTBP3-209ENST00000527792 ZBTB40Q9NUA8 1239 aa19.26■□□□□ 0.67
LTBP3-209ENST00000527792 IBTKQ9P2D0 1353 aaPredicted RBP19.25■□□□□ 0.67
LTBP3-209ENST00000527792 A0A0G2JLW4 131 aa19.25■□□□□ 0.67
LTBP3-209ENST00000527792 KIF3CO14782 793 aa19.25■□□□□ 0.67
LTBP3-209ENST00000527792 DDR1Q08345 913 aa19.25■□□□□ 0.67
LTBP3-209ENST00000527792 ERFEQ4G0M1 354 aa19.25■□□□□ 0.67
LTBP3-209ENST00000527792 SYNE4Q8N205 404 aa19.25■□□□□ 0.67
LTBP3-209ENST00000527792 SUCLG2Q96I99 432 aa19.25■□□□□ 0.67
LTBP3-209ENST00000527792 LRRFIP2Q9Y608 721 aaKnown RBP19.25■□□□□ 0.67
LTBP3-209ENST00000527792 UTYO14607 1347 aa19.25■□□□□ 0.67
LTBP3-209ENST00000527792 POLRMTO00411 1230 aaKnown RBP19.24■□□□□ 0.67
LTBP3-209ENST00000527792 IRS4O14654 1257 aaPredicted RBP19.24■□□□□ 0.67
LTBP3-209ENST00000527792 TGFB2P61812 414 aa19.24■□□□□ 0.67
LTBP3-209ENST00000527792 CCDC24Q8N4L8 307 aa19.24■□□□□ 0.67
LTBP3-209ENST00000527792 CNBD1Q8NA66 436 aa19.24■□□□□ 0.67
LTBP3-209ENST00000527792 CASP7P55210 303 aa19.23■□□□□ 0.67
LTBP3-209ENST00000527792 ST5P78524 1137 aa19.23■□□□□ 0.67
LTBP3-209ENST00000527792 AAMPQ13685 434 aa19.23■□□□□ 0.67
LTBP3-209ENST00000527792 BCS1LQ9Y276 419 aa19.23■□□□□ 0.67
LTBP3-209ENST00000527792 CDHR2Q9BYE9 1310 aa19.23■□□□□ 0.67
LTBP3-209ENST00000527792 HCLS1P14317 486 aaPredicted RBP19.22■□□□□ 0.67
LTBP3-209ENST00000527792 HSP90B1P14625 803 aaKnown RBP19.22■□□□□ 0.67
LTBP3-209ENST00000527792 ARHGAP27Q6ZUM4 889 aa19.22■□□□□ 0.67
LTBP3-209ENST00000527792 PRR5LQ6MZQ0 368 aa19.21■□□□□ 0.67
LTBP3-209ENST00000527792 CHMP3Q9Y3E7 222 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms