RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 HCN4Q9Y3Q4 1203 aa6.49□□□□□ -1.37
CLNS1A-209ENST00000527299 TTBK1Q5TCY1 1321 aaPredicted RBP6.49□□□□□ -1.37
CLNS1A-209ENST00000527299 ZBTB7BO15156 539 aaPredicted RBP6.48□□□□□ -1.37
CLNS1A-209ENST00000527299 DMRTC2Q8IXT2 367 aaPredicted RBP6.48□□□□□ -1.37
CLNS1A-209ENST00000527299 TSPAN10Q9H1Z9 355 aaPredicted RBP6.48□□□□□ -1.37
CLNS1A-209ENST00000527299 ALG2Q9H553 416 aa6.48□□□□□ -1.37
CLNS1A-209ENST00000527299 USP21Q9UK80 565 aa6.48□□□□□ -1.37
CLNS1A-209ENST00000527299 TBC1D8BQ0IIM8 1120 aa6.47□□□□□ -1.37
CLNS1A-209ENST00000527299 MCTP1Q6DN14 999 aa6.47□□□□□ -1.37
CLNS1A-209ENST00000527299 PSAPL1Q6NUJ1 521 aa6.47□□□□□ -1.37
CLNS1A-209ENST00000527299 IGFLR1Q9H665 355 aa6.47□□□□□ -1.37
CLNS1A-209ENST00000527299 NAGPAQ9UK23 515 aa6.47□□□□□ -1.37
CLNS1A-209ENST00000527299 CHMP3Q9Y3E7 222 aa6.47□□□□□ -1.37
CLNS1A-209ENST00000527299 USP17L5A8MUK1 530 aa6.46□□□□□ -1.38
CLNS1A-209ENST00000527299 BTLAQ7Z6A9 289 aa6.46□□□□□ -1.38
CLNS1A-209ENST00000527299 DEPDC4Q8N2C3 294 aa6.46□□□□□ -1.38
CLNS1A-209ENST00000527299 WFDC12Q8WWY7 111 aa6.46□□□□□ -1.38
CLNS1A-209ENST00000527299 DNAJB12Q9NXW2 375 aaKnown RBP6.46□□□□□ -1.38
CLNS1A-209ENST00000527299 M0R2N6 131 aa6.45□□□□□ -1.38
CLNS1A-209ENST00000527299 RGS9O75916 674 aaPredicted RBP6.45□□□□□ -1.38
CLNS1A-209ENST00000527299 CCDC102BQ68D86 513 aa6.45□□□□□ -1.38
CLNS1A-209ENST00000527299 MSL1Q68DK7 614 aa6.45□□□□□ -1.38
CLNS1A-209ENST00000527299 TRIM50Q86XT4 487 aa6.45□□□□□ -1.38
CLNS1A-209ENST00000527299 DTWD1Q8N5C7 304 aa6.45□□□□□ -1.38
CLNS1A-209ENST00000527299 TPCN2Q8NHX9 752 aa6.45□□□□□ -1.38
CLNS1A-209ENST00000527299 GSX2Q9BZM3 304 aa6.45□□□□□ -1.38
CLNS1A-209ENST00000527299 KIAA1024Q9UPX6 916 aa6.45□□□□□ -1.38
CLNS1A-209ENST00000527299 NOS3P29474 1203 aa6.44□□□□□ -1.38
CLNS1A-209ENST00000527299 FBXO11Q86XK2 927 aa6.44□□□□□ -1.38
CLNS1A-209ENST00000527299 IREB2P48200 963 aaKnown RBP6.43□□□□□ -1.38
CLNS1A-209ENST00000527299 CLDN10P78369 228 aa6.43□□□□□ -1.38
CLNS1A-209ENST00000527299 GRIK5Q16478 980 aa6.43□□□□□ -1.38
CLNS1A-209ENST00000527299 ALDH16A1Q8IZ83 802 aa6.43□□□□□ -1.38
CLNS1A-209ENST00000527299 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.43□□□□□ -1.38
CLNS1A-209ENST00000527299 COL17A1Q9UMD9 1497 aaPredicted RBP6.42□□□□□ -1.38
CLNS1A-209ENST00000527299 C21orf2O43822 256 aa6.42□□□□□ -1.38
CLNS1A-209ENST00000527299 ATP1A2P50993 1020 aa6.42□□□□□ -1.38
CLNS1A-209ENST00000527299 MCM6Q14566 821 aa6.42□□□□□ -1.38
CLNS1A-209ENST00000527299 HIF1AQ16665 826 aa6.42□□□□□ -1.38
CLNS1A-209ENST00000527299 PRR23CQ6ZRP0 262 aa6.42□□□□□ -1.38
CLNS1A-209ENST00000527299 SLC51AQ86UW1 340 aa6.42□□□□□ -1.38
CLNS1A-209ENST00000527299 STAG2Q8N3U4 1231 aa6.42□□□□□ -1.38
CLNS1A-209ENST00000527299 FRRS1LQ9P0K9 344 aa6.42□□□□□ -1.38
CLNS1A-209ENST00000527299 COG6Q9Y2V7 657 aa6.42□□□□□ -1.38
CLNS1A-209ENST00000527299 PPP1R12BO60237 982 aaPredicted RBP6.41□□□□□ -1.38
CLNS1A-209ENST00000527299 CCINQ13939 588 aa6.41□□□□□ -1.38
CLNS1A-209ENST00000527299 PCSK7Q16549 785 aa6.41□□□□□ -1.38
CLNS1A-209ENST00000527299 IER5Q5VY09 327 aa6.41□□□□□ -1.38
CLNS1A-209ENST00000527299 IGF2-ASQ6U949 168 aa6.41□□□□□ -1.38
CLNS1A-209ENST00000527299 PLEKHM2Q8IWE5 1019 aa6.41□□□□□ -1.38
CLNS1A-209ENST00000527299 MEGF10Q96KG7 1140 aa6.41□□□□□ -1.38
CLNS1A-209ENST00000527299 PNMA5Q96PV4 448 aa6.41□□□□□ -1.38
CLNS1A-209ENST00000527299 LPIN3Q9BQK8 851 aa6.41□□□□□ -1.38
CLNS1A-209ENST00000527299 C2orf49Q9BVC5 232 aaPredicted RBP6.41□□□□□ -1.38
CLNS1A-209ENST00000527299 NFKB1P19838 968 aa6.4□□□□□ -1.38
CLNS1A-209ENST00000527299 FAM35AQ86V20 835 aa6.4□□□□□ -1.38
CLNS1A-209ENST00000527299 LARGE2Q8N3Y3 721 aa6.4□□□□□ -1.38
CLNS1A-209ENST00000527299 TSEN2Q8NCE0 465 aaKnown RBP6.4□□□□□ -1.38
CLNS1A-209ENST00000527299 DMGDHQ9UI17 866 aaKnown RBP6.4□□□□□ -1.38
CLNS1A-209ENST00000527299 MAP3K6O95382 1288 aa6.39□□□□□ -1.39
CLNS1A-209ENST00000527299 CPB1P15086 417 aa6.39□□□□□ -1.39
CLNS1A-209ENST00000527299 DZIP1LQ8IYY4 767 aaKnown RBP6.39□□□□□ -1.39
CLNS1A-209ENST00000527299 SIX5Q8N196 739 aa6.39□□□□□ -1.39
CLNS1A-209ENST00000527299 TTC9Q92623 222 aa6.39□□□□□ -1.39
CLNS1A-209ENST00000527299 PCMTD2Q9NV79 361 aa6.39□□□□□ -1.39
CLNS1A-209ENST00000527299 USP17L3A6NCW0 530 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 USP17L4A6NCW7 530 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 PALM3A6NDB9 673 aaPredicted RBP6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 PAX4O43316 350 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 DKK1O94907 266 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 GRNP28799 593 aaKnown RBP6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 PLAURQ03405 335 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 PERM1Q5SV97 790 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 USP17L2Q6R6M4 530 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 USP17L1Q7RTZ2 530 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 WFDC8Q8IUA0 241 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 OGFOD1Q8N543 542 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 GAS2L2Q8NHY3 880 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 TRPM4Q8TD43 1214 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 FMNL2Q96PY5 1086 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 ATAD2Q6PL18 1390 aa6.38□□□□□ -1.39
CLNS1A-209ENST00000527299 ZBTB42B2RXF5 422 aa6.37□□□□□ -1.39
CLNS1A-209ENST00000527299 TGFBR3LH3BV60 316 aa6.37□□□□□ -1.39
CLNS1A-209ENST00000527299 DLL1O00548 723 aa6.37□□□□□ -1.39
CLNS1A-209ENST00000527299 DEAF1O75398 565 aaPredicted RBP6.37□□□□□ -1.39
CLNS1A-209ENST00000527299 FSTP19883 344 aa6.37□□□□□ -1.39
CLNS1A-209ENST00000527299 BCS1LQ9Y276 419 aa6.37□□□□□ -1.39
CLNS1A-209ENST00000527299 TXKP42681 527 aa6.36□□□□□ -1.39
CLNS1A-209ENST00000527299 CD97P48960 835 aa6.36□□□□□ -1.39
CLNS1A-209ENST00000527299 RTN1Q16799 776 aa6.36□□□□□ -1.39
CLNS1A-209ENST00000527299 ELMSAN1Q6PJG2 1045 aa6.36□□□□□ -1.39
CLNS1A-209ENST00000527299 SCG3Q8WXD2 468 aaKnown RBP6.36□□□□□ -1.39
CLNS1A-209ENST00000527299 NGLY1Q96IV0 654 aa6.36□□□□□ -1.39
CLNS1A-209ENST00000527299 ZFATQ9P243 1243 aa6.36□□□□□ -1.39
CLNS1A-209ENST00000527299 EPB42P16452 691 aa6.35□□□□□ -1.39
CLNS1A-209ENST00000527299 SSTR4P31391 388 aa6.35□□□□□ -1.39
CLNS1A-209ENST00000527299 DHX32Q7L7V1 743 aaKnown RBP6.35□□□□□ -1.39
CLNS1A-209ENST00000527299 TMEM130Q8N3G9 435 aa6.35□□□□□ -1.39
CLNS1A-209ENST00000527299 ADAMTS19Q8TE59 1207 aa6.35□□□□□ -1.39
CLNS1A-209ENST00000527299 UCN2Q96RP3 112 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms