RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, human

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-222	ENST00000524226	FAM208A	Q9UK61	1670 aa	Known RBP	3.07	□□□□□ -1.92
PCM1-222	ENST00000524226	ABCC6	O95255	1503 aa		3.07	□□□□□ -1.92
PCM1-222	ENST00000524226	MYL6B	P14649	208 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	TAF3	Q5VWG9	929 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	CCDC73	Q6ZRK6	1079 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	VSIG10	Q8N0Z9	540 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	3.06	□□□□□ -1.92	2e-8	■■■■□ 23.3
PCM1-222	ENST00000524226	CHMP5	Q9NZZ3	219 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	HDAC9	Q9UKV0	1011 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	R3HCC1	Q9Y3T6	440 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	APP	P05067	770 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	SNRPA1	P09661	255 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	EZR	P15311	586 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	PHKG2	P15735	406 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	TRDN	Q13061	729 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	G3BP1	Q13283	466 aa	Known RBP eCLIP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	SASS6	Q6UVJ0	657 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	CCDC43	Q96MW1	224 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	MEIS3	Q99687	375 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	MAP3K2	Q9Y2U5	619 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	CPLX1	O14810	134 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	ERC2	O15083	957 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	IFIT2	P09913	472 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	TCIRG1	Q13488	830 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	BMP2KL	Q5H9B9	411 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	LARP1	Q6PKG0	1096 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	LEKR1	Q6ZMV7	388 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	G2E3	Q7L622	706 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	FAM43A	Q8N2R8	423 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	FLAD1	Q8NFF5	587 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	SMARCE1	Q969G3	411 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	RILPL2	Q969X0	211 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	BRMS1	Q9HCU9	246 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	LRRFIP2	Q9Y608	721 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	TRPM3	Q9HCF6	1732 aa	Predicted RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	LRRC37A3	O60309	1634 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	PHRF1	Q9P1Y6	1649 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	ALDH1L1	O75891	902 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	XBP1	P17861	261 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	EIF6	P56537	245 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	IK	Q13123	557 aa	Predicted RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	ARHGAP27	Q6ZUM4	889 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	DCTPP1	Q9H773	170 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	3.06	□□□□□ -1.92	2e-6	■■■■■ 42.1
PCM1-222	ENST00000524226	PLEKHG2	Q9H7P9	1386 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	PATL2	C9JE40	543 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	MPHOSPH10	O00566	681 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	SURF6	O75683	361 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	PDIA4	P13667	645 aa	Known RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	EAPP	Q56P03	285 aa	Predicted RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	OLFM4	Q6UX06	510 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	KSR2	Q6VAB6	950 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	STK11IP	Q8N1F8	1099 aa		3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	ZNF526	Q8TF50	670 aa	Predicted RBP	3.06	□□□□□ -1.92
PCM1-222	ENST00000524226	LMO7	Q8WWI1	1683 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	ERICH2	A1L162	156 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	PI4KAP2	A4QPH2	592 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	SRGAP3	O43295	1099 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	DHX16	O60231	1041 aa	Known RBP	3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	OFD1	O75665	1012 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	MBD3	O95983	291 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	ATP8B2	P98198	1209 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	TTC22	Q5TAA0	569 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	ZNF790	Q6PG37	636 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	CNTROB	Q8N137	903 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	PI4KAP1	Q8N8J0	262 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	TSPYL1	Q9H0U9	437 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	WDR17	Q8IZU2	1322 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	CPD	O75976	1380 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	CEMIP	Q8WUJ3	1361 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	MX1	P20591	662 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	PDE4C	Q08493	712 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	IQCE	Q6IPM2	695 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	NFATC2IP	Q8NCF5	419 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	MYD88	Q99836	296 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	TEX13A	Q9BXU3	409 aa	Predicted RBP	3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	PHAX	Q9H814	394 aa	Known RBP	3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	AXIN2	Q9Y2T1	843 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	PXDN	Q92626	1479 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	KDM4F	A0A1W2PPD8	638 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	GOLGA6L10	A6NI86	522 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	SMARCA5	O60264	1052 aa	Predicted RBP	3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	CAPN15	O75808	1086 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	EIF3J	O75822	258 aa	Known RBP	3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	KIAA0754	O94854	1291 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	MCM2	P49736	904 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	MRE11	P49959	708 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	ARID3A	Q99856	593 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	ALS2	Q96Q42	1657 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	MARF1	Q9Y4F3	1742 aa	Known RBP	3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	MED1	Q15648	1581 aa	Predicted RBP	3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	ERVV-2	B6SEH9	535 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	ERLIN1	O75477	346 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	SLC4A3	P48751	1232 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	SLC39A6	Q13433	755 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	FILIP1L	Q4L180	1135 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	BICD2	Q8TD16	824 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	KIF1BP	Q96EK5	621 aa		3.05	□□□□□ -1.92
PCM1-222	ENST00000524226	MPHOSPH6	Q99547	160 aa	Known RBP	3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms