RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 LARP1Q6PKG0 1096 aaKnown RBP13.28□□□□□ -0.28
HDAC9-228ENST00000524023 RIC3Q7Z5B4 369 aa13.28□□□□□ -0.28
HDAC9-228ENST00000524023 MAP4K1Q92918 833 aa13.28□□□□□ -0.28
HDAC9-228ENST00000524023 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
HDAC9-228ENST00000524023 SNRKQ9NRH2 765 aa13.28□□□□□ -0.28
HDAC9-228ENST00000524023 SLC39A6Q13433 755 aa13.27□□□□□ -0.28
HDAC9-228ENST00000524023 TLR7Q9NYK1 1049 aaKnown RBP13.27□□□□□ -0.28
HDAC9-228ENST00000524023 MTMR6Q9Y217 621 aa13.27□□□□□ -0.28
HDAC9-228ENST00000524023 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
HDAC9-228ENST00000524023 FAM184AQ8NB25 1140 aa13.27□□□□□ -0.29
HDAC9-228ENST00000524023 SIL1Q9H173 461 aa13.27□□□□□ -0.29
HDAC9-228ENST00000524023 NEURL1BA8MQ27 555 aa13.26□□□□□ -0.29
HDAC9-228ENST00000524023 LETM1O95202 739 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-228ENST00000524023 KCNJ4P48050 445 aa13.26□□□□□ -0.29
HDAC9-228ENST00000524023 ME3Q16798 604 aa13.26□□□□□ -0.29
HDAC9-228ENST00000524023 SLC52A2Q9HAB3 445 aa13.26□□□□□ -0.29
HDAC9-228ENST00000524023 KDM6AO15550 1401 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-228ENST00000524023 FIBPO43427 364 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 NEXNQ0ZGT2 675 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 GCKRQ14397 625 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 UVSSAQ2YD98 709 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 KLHDC4Q8TBB5 520 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 DDX54Q8TDD1 881 aaKnown RBP13.25□□□□□ -0.29
HDAC9-228ENST00000524023 BOLA2Q9H3K6 86 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 KIF1AQ12756 1690 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 MRC1P22897 1456 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 NPHP3Q7Z494 1330 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 MST1RQ04912 1400 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 A0A0D9SFI3 127 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 SLC27A2O14975 620 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 MYL6BP14649 208 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 ZC3H6P61129 1189 aaKnown RBP13.25□□□□□ -0.29
HDAC9-228ENST00000524023 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 RAPGEF4Q8WZA2 1011 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 FSD1Q9BTV5 496 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 TPCN1Q9ULQ1 816 aa13.25□□□□□ -0.29
HDAC9-228ENST00000524023 DTNBO60941 627 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 PSMA5P28066 241 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 EPHA10Q5JZY3 1008 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 COPS6Q7L5N1 327 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 NECAB1Q8N987 351 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 MYD88Q99836 296 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 METTL22Q9BUU2 404 aaPredicted RBP13.24□□□□□ -0.29
HDAC9-228ENST00000524023 C1orf167Q5SNV9 1468 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 PHKG2P15735 406 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 TERF1P54274 439 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 DNM1Q05193 864 aaKnown RBP13.24□□□□□ -0.29
HDAC9-228ENST00000524023 MED23Q9ULK4 1368 aa13.24□□□□□ -0.29
HDAC9-228ENST00000524023 COL9A3Q14050 684 aaPredicted RBP13.23□□□□□ -0.29
HDAC9-228ENST00000524023 TPRNQ4KMQ1 711 aa13.23□□□□□ -0.29
HDAC9-228ENST00000524023 RNF20Q5VTR2 975 aa13.23□□□□□ -0.29
HDAC9-228ENST00000524023 NLRP2Q9NX02 1062 aa13.23□□□□□ -0.29
HDAC9-228ENST00000524023 JCADQ9P266 1359 aa13.23□□□□□ -0.29
HDAC9-228ENST00000524023 VPS37CA5D8V6 355 aaPredicted RBP13.22□□□□□ -0.29
HDAC9-228ENST00000524023 TATP17735 454 aaPredicted RBP13.22□□□□□ -0.29
HDAC9-228ENST00000524023 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
HDAC9-228ENST00000524023 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
HDAC9-228ENST00000524023 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
HDAC9-228ENST00000524023 RRP9O43818 475 aaKnown RBP13.22□□□□□ -0.29
HDAC9-228ENST00000524023 PTMAP06454 111 aaKnown RBP13.22□□□□□ -0.29
HDAC9-228ENST00000524023 BLOC1S2Q6QNY1 142 aa13.22□□□□□ -0.29
HDAC9-228ENST00000524023 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
HDAC9-228ENST00000524023 LRP10Q7Z4F1 713 aa13.22□□□□□ -0.29
HDAC9-228ENST00000524023 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
HDAC9-228ENST00000524023 ALDH8A1Q9H2A2 487 aaPredicted RBP13.22□□□□□ -0.29
HDAC9-228ENST00000524023 COPRSQ9NQ92 184 aa13.22□□□□□ -0.29
HDAC9-228ENST00000524023 ADAMTSL3P82987 1691 aa13.22□□□□□ -0.29
HDAC9-228ENST00000524023 AFDNP55196 1824 aaKnown RBP13.22□□□□□ -0.29
HDAC9-228ENST00000524023 MEGF6O75095 1541 aa13.21□□□□□ -0.29
HDAC9-228ENST00000524023 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.29
HDAC9-228ENST00000524023 HCLS1P14317 486 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-228ENST00000524023 HSP90AA2PQ14568 343 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-228ENST00000524023 ANKRD1Q15327 319 aa13.21□□□□□ -0.29
HDAC9-228ENST00000524023 LARP1BQ659C4 914 aaKnown RBP13.21□□□□□ -0.29
HDAC9-228ENST00000524023 ZNF589Q86UQ0 364 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-228ENST00000524023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.29
HDAC9-228ENST00000524023 TAF6LQ9Y6J9 622 aa13.21□□□□□ -0.29
HDAC9-228ENST00000524023 RPS6KB1P23443 525 aa13.21□□□□□ -0.3
HDAC9-228ENST00000524023 RFX5P48382 616 aaPredicted RBP13.21□□□□□ -0.3
HDAC9-228ENST00000524023 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.3
HDAC9-228ENST00000524023 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.3
HDAC9-228ENST00000524023 FUCA2Q9BTY2 467 aa13.21□□□□□ -0.3
HDAC9-228ENST00000524023 R3HCC1Q9Y3T6 440 aaKnown RBP13.21□□□□□ -0.3
HDAC9-228ENST00000524023 USP16Q9Y5T5 823 aa13.21□□□□□ -0.3
HDAC9-228ENST00000524023 TAF5LO75529 589 aa13.2□□□□□ -0.3
HDAC9-228ENST00000524023 SNRPA1P09661 255 aaKnown RBP13.2□□□□□ -0.3
HDAC9-228ENST00000524023 ATP5JP18859 108 aa13.2□□□□□ -0.3
HDAC9-228ENST00000524023 PTPN12Q05209 780 aaKnown RBP13.2□□□□□ -0.3
HDAC9-228ENST00000524023 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
HDAC9-228ENST00000524023 HMG20BQ9P0W2 317 aa13.2□□□□□ -0.3
HDAC9-228ENST00000524023 USP25Q9UHP3 1055 aa13.2□□□□□ -0.3
HDAC9-228ENST00000524023 DBNLQ9UJU6 430 aaKnown RBP13.2□□□□□ -0.3
HDAC9-228ENST00000524023 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
HDAC9-228ENST00000524023 COL18A1P39060 1754 aa13.2□□□□□ -0.3
HDAC9-228ENST00000524023 TOB2Q14106 344 aaPredicted RBP13.2□□□□□ -0.3
HDAC9-228ENST00000524023 GIMAP6Q6P9H5 292 aa13.2□□□□□ -0.3
HDAC9-228ENST00000524023 JARID2Q92833 1246 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms