RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 GNEQ9Y223 722 aaKnown RBP10.24□□□□□ -0.77
CPNE3-207ENST00000523588 ADAMTS2O95450 1211 aa10.23□□□□□ -0.77
CPNE3-207ENST00000523588 ABL1P00519 1130 aa10.23□□□□□ -0.77
CPNE3-207ENST00000523588 ARSDP51689 593 aa10.23□□□□□ -0.77
CPNE3-207ENST00000523588 ZNF211Q13398 564 aaPredicted RBP10.23□□□□□ -0.77
CPNE3-207ENST00000523588 EGFL7Q9UHF1 273 aa10.23□□□□□ -0.77
CPNE3-207ENST00000523588 BMP4P12644 408 aa10.22□□□□□ -0.77
CPNE3-207ENST00000523588 LORP23490 312 aaPredicted RBP10.22□□□□□ -0.77
CPNE3-207ENST00000523588 FKBP4Q02790 459 aaKnown RBP eCLIP10.22□□□□□ -0.77
CPNE3-207ENST00000523588 SF3B2Q13435 895 aaKnown RBP10.22□□□□□ -0.77
CPNE3-207ENST00000523588 ICMTO60725 284 aa10.21□□□□□ -0.77
CPNE3-207ENST00000523588 MPSTP25325 297 aa10.21□□□□□ -0.77
CPNE3-207ENST00000523588 ZAP70P43403 619 aa10.21□□□□□ -0.77
CPNE3-207ENST00000523588 ECM1Q16610 540 aa10.21□□□□□ -0.77
CPNE3-207ENST00000523588 ABTB2Q8N961 1025 aa10.21□□□□□ -0.77
CPNE3-207ENST00000523588 CCER1Q8TC90 406 aaPredicted RBP10.21□□□□□ -0.77
CPNE3-207ENST00000523588 SLC30A3Q99726 388 aa10.21□□□□□ -0.77
CPNE3-207ENST00000523588 NSFL1CQ9UNZ2 370 aaKnown RBP10.21□□□□□ -0.77
CPNE3-207ENST00000523588 USP20Q9Y2K6 914 aa10.21□□□□□ -0.77
CPNE3-207ENST00000523588 MAP2K3P46734 347 aa10.2□□□□□ -0.78
CPNE3-207ENST00000523588 KCNA1Q09470 495 aa10.2□□□□□ -0.78
CPNE3-207ENST00000523588 RTCBQ9Y3I0 505 aaKnown RBP10.2□□□□□ -0.78
CPNE3-207ENST00000523588 EIF1AXP47813 144 aaKnown RBP10.19□□□□□ -0.78
CPNE3-207ENST00000523588 SPEM2Q0P670 501 aa10.19□□□□□ -0.78
CPNE3-207ENST00000523588 ATCAYQ86WG3 371 aa10.19□□□□□ -0.78
CPNE3-207ENST00000523588 KLF15Q9UIH9 416 aa10.19□□□□□ -0.78
CPNE3-207ENST00000523588 FAM13AO94988 1023 aa10.18□□□□□ -0.78
CPNE3-207ENST00000523588 EPB42P16452 691 aa10.18□□□□□ -0.78
CPNE3-207ENST00000523588 NOM1Q5C9Z4 860 aaKnown RBP10.18□□□□□ -0.78
CPNE3-207ENST00000523588 RGL4Q8IZJ4 473 aa10.18□□□□□ -0.78
CPNE3-207ENST00000523588 WHAMMQ8TF30 809 aa10.18□□□□□ -0.78
CPNE3-207ENST00000523588 ACDQ96AP0 544 aa10.18□□□□□ -0.78
CPNE3-207ENST00000523588 GSX2Q9BZM3 304 aa10.18□□□□□ -0.78
CPNE3-207ENST00000523588 KCNMB2Q9Y691 235 aa10.18□□□□□ -0.78
CPNE3-207ENST00000523588 ARAFP10398 606 aa10.17□□□□□ -0.78
CPNE3-207ENST00000523588 ZNF468Q5VIY5 522 aaPredicted RBP10.17□□□□□ -0.78
CPNE3-207ENST00000523588 HOMEZQ8IX15 550 aa10.17□□□□□ -0.78
CPNE3-207ENST00000523588 C11orf16Q9NQ32 467 aa10.17□□□□□ -0.78
CPNE3-207ENST00000523588 H3BRB1 525 aa10.16□□□□□ -0.78
CPNE3-207ENST00000523588 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
CPNE3-207ENST00000523588 GPR152Q8TDT2 470 aa10.16□□□□□ -0.78
CPNE3-207ENST00000523588 OXCT2Q9BYC2 517 aaPredicted RBP10.16□□□□□ -0.78
CPNE3-207ENST00000523588 TUT1Q9H6E5 874 aaKnown RBP10.16□□□□□ -0.78
CPNE3-207ENST00000523588 AVENQ9NQS1 362 aaPredicted RBP10.16□□□□□ -0.78
CPNE3-207ENST00000523588 PRR12Q9ULL5 1215 aa10.16□□□□□ -0.78
CPNE3-207ENST00000523588 IVNS1ABPQ9Y6Y0 642 aa10.16□□□□□ -0.78
CPNE3-207ENST00000523588 SOWAHDA6NJG2 315 aa10.15□□□□□ -0.78
CPNE3-207ENST00000523588 EGFRP00533 1210 aa10.15□□□□□ -0.78
CPNE3-207ENST00000523588 CCINQ13939 588 aa10.15□□□□□ -0.78
CPNE3-207ENST00000523588 TRIP4Q15650 581 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-207ENST00000523588 ALKBH2Q6NS38 261 aa10.15□□□□□ -0.78
CPNE3-207ENST00000523588 LYPD4Q6UWN0 246 aa10.15□□□□□ -0.78
CPNE3-207ENST00000523588 RAB44Q7Z6P3 723 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-207ENST00000523588 PIK3R5Q8WYR1 880 aa10.15□□□□□ -0.78
CPNE3-207ENST00000523588 FAM13BQ9NYF5 915 aa10.15□□□□□ -0.78
CPNE3-207ENST00000523588 FZD6O60353 706 aa10.14□□□□□ -0.79
CPNE3-207ENST00000523588 PCBP4P57723 403 aaKnown RBP10.14□□□□□ -0.79
CPNE3-207ENST00000523588 ARHGAP4P98171 946 aa10.14□□□□□ -0.79
CPNE3-207ENST00000523588 ZNF385CQ66K41 422 aaPredicted RBP10.14□□□□□ -0.79
CPNE3-207ENST00000523588 SYT9Q86SS6 491 aa10.14□□□□□ -0.79
CPNE3-207ENST00000523588 GLYCTKQ8IVS8 523 aa10.14□□□□□ -0.79
CPNE3-207ENST00000523588 GGA1Q9UJY5 639 aa10.14□□□□□ -0.79
CPNE3-207ENST00000523588 CELA2BP08218 269 aaPredicted RBP10.13□□□□□ -0.79
CPNE3-207ENST00000523588 C1orf229Q6ZS94 237 aaPredicted RBP10.13□□□□□ -0.79
CPNE3-207ENST00000523588 AEBP1Q8IUX7 1158 aa10.13□□□□□ -0.79
CPNE3-207ENST00000523588 EDEM1Q92611 657 aa10.13□□□□□ -0.79
CPNE3-207ENST00000523588 GDF2Q9UK05 429 aaPredicted RBP10.13□□□□□ -0.79
CPNE3-207ENST00000523588 NEURL1BA8MQ27 555 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 XYLBO75191 536 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 ADH6P28332 368 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 INSM1Q01101 510 aaPredicted RBP10.12□□□□□ -0.79
CPNE3-207ENST00000523588 SLCO4C1Q6ZQN7 724 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 FCHSD1Q86WN1 690 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 KCTD17Q8N5Z5 321 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 GOLGA6L1Q8N7Z2 621 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 ZSCAN1Q8NBB4 408 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 BHMTQ93088 406 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 NUDT16Q96DE0 195 aaKnown RBP10.12□□□□□ -0.79
CPNE3-207ENST00000523588 MDFIQ99750 246 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 EFCC1Q9HA90 598 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 ZFATQ9P243 1243 aa10.12□□□□□ -0.79
CPNE3-207ENST00000523588 PATL2C9JE40 543 aaKnown RBP10.11□□□□□ -0.79
CPNE3-207ENST00000523588 SIN3BO75182 1162 aa10.11□□□□□ -0.79
CPNE3-207ENST00000523588 SASH3O75995 380 aa10.11□□□□□ -0.79
CPNE3-207ENST00000523588 PDGFAP04085 211 aa10.11□□□□□ -0.79
CPNE3-207ENST00000523588 BCRP11274 1271 aa10.11□□□□□ -0.79
CPNE3-207ENST00000523588 TARSP26639 723 aaKnown RBP10.11□□□□□ -0.79
CPNE3-207ENST00000523588 MZF1P28698 734 aaPredicted RBP10.11□□□□□ -0.79
CPNE3-207ENST00000523588 DNM1Q05193 864 aaKnown RBP10.11□□□□□ -0.79
CPNE3-207ENST00000523588 CCDC87Q9NVE4 849 aa10.11□□□□□ -0.79
CPNE3-207ENST00000523588 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.11□□□□□ -0.79
CPNE3-207ENST00000523588 OIP5O43482 229 aa10.1□□□□□ -0.79
CPNE3-207ENST00000523588 NFKB1P19838 968 aa10.1□□□□□ -0.79
CPNE3-207ENST00000523588 KRT25Q7Z3Z0 450 aa10.1□□□□□ -0.79
CPNE3-207ENST00000523588 LRRC4BQ9NT99 713 aa10.1□□□□□ -0.79
CPNE3-207ENST00000523588 POLIQ9UNA4 740 aa10.1□□□□□ -0.79
CPNE3-207ENST00000523588 UBAP1LF5GYI3 381 aa10.09□□□□□ -0.79
CPNE3-207ENST00000523588 EPXP11678 715 aa10.09□□□□□ -0.79
CPNE3-207ENST00000523588 NEUROD1Q13562 356 aa10.09□□□□□ -0.79
CPNE3-207ENST00000523588 GGNBP2Q9H3C7 697 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms