RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 SMARCC1Q92922 1105 aaPredicted RBP25.57■■□□□ 1.68
SQLE-206ENST00000523430 C22orf23Q9BZE7 217 aa25.57■■□□□ 1.68
SQLE-206ENST00000523430 CCDC87Q9NVE4 849 aa25.57■■□□□ 1.68
SQLE-206ENST00000523430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.57■■□□□ 1.68
SQLE-206ENST00000523430 AOX1Q06278 1338 aa25.57■■□□□ 1.68
SQLE-206ENST00000523430 FAM182BQ5T319 152 aa25.57■■□□□ 1.68
SQLE-206ENST00000523430 GIGYF2Q6Y7W6 1299 aaKnown RBP25.57■■□□□ 1.68
SQLE-206ENST00000523430 ZNF831Q5JPB2 1677 aa25.56■■□□□ 1.68
SQLE-206ENST00000523430 SASH1O94885 1247 aa25.56■■□□□ 1.68
SQLE-206ENST00000523430 BTAF1O14981 1849 aa25.56■■□□□ 1.68
SQLE-206ENST00000523430 G3BP1Q13283 466 aaKnown RBP eCLIP25.55■■□□□ 1.68
SQLE-206ENST00000523430 LMBR1LQ6UX01 489 aa25.55■■□□□ 1.68
SQLE-206ENST00000523430 DZIP3Q86Y13 1208 aaKnown RBP25.55■■□□□ 1.68
SQLE-206ENST00000523430 TBC1D2BQ9UPU7 963 aa25.55■■□□□ 1.68
SQLE-206ENST00000523430 TRIM28Q13263 835 aaKnown RBP25.54■■□□□ 1.68
SQLE-206ENST00000523430 CLASRPQ8N2M8 674 aaKnown RBP25.54■■□□□ 1.68
SQLE-206ENST00000523430 COPRSQ9NQ92 184 aa25.54■■□□□ 1.68
SQLE-206ENST00000523430 MYH14Q7Z406 1995 aaKnown RBP25.54■■□□□ 1.68
SQLE-206ENST00000523430 NUP98P52948 1817 aa25.53■■□□□ 1.68
SQLE-206ENST00000523430 GPTP24298 496 aa25.53■■□□□ 1.68
SQLE-206ENST00000523430 EIF5P55010 431 aaKnown RBP25.53■■□□□ 1.68
SQLE-206ENST00000523430 PTPN12Q05209 780 aaKnown RBP25.53■■□□□ 1.68
SQLE-206ENST00000523430 PI4K2BQ8TCG2 481 aa25.53■■□□□ 1.68
SQLE-206ENST00000523430 TRPC5Q9UL62 973 aaPredicted RBP25.53■■□□□ 1.68
SQLE-206ENST00000523430 CHMP3Q9Y3E7 222 aa25.53■■□□□ 1.68
SQLE-206ENST00000523430 USP42Q9H9J4 1324 aaKnown RBP25.52■■□□□ 1.68
SQLE-206ENST00000523430 HSP90AB3PQ58FF7 597 aa25.51■■□□□ 1.67
SQLE-206ENST00000523430 AACSQ86V21 672 aa25.51■■□□□ 1.67
SQLE-206ENST00000523430 NLRP10Q86W26 655 aa25.51■■□□□ 1.67
SQLE-206ENST00000523430 ERVV-1B6SEH8 477 aa25.5■■□□□ 1.67
SQLE-206ENST00000523430 SLC4A3P48751 1232 aa25.5■■□□□ 1.67
SQLE-206ENST00000523430 FAM89AQ96GI7 184 aa25.5■■□□□ 1.67
SQLE-206ENST00000523430 TRIM6-TRIM34B2RNG4 842 aa25.49■■□□□ 1.67
SQLE-206ENST00000523430 PCCAP05165 728 aaPredicted RBP25.49■■□□□ 1.67
SQLE-206ENST00000523430 KCNQ4P56696 695 aa25.49■■□□□ 1.67
SQLE-206ENST00000523430 ERICH6Q7L0X2 663 aa25.49■■□□□ 1.67
SQLE-206ENST00000523430 LINC00116Q8NCU8 138 aa25.49■■□□□ 1.67
SQLE-206ENST00000523430 CASC1Q6TDU7 716 aa25.49■■□□□ 1.67
SQLE-206ENST00000523430 ZBTB38Q8NAP3 1195 aaPredicted RBP25.49■■□□□ 1.67
SQLE-206ENST00000523430 RILPL2Q969X0 211 aa25.49■■□□□ 1.67
SQLE-206ENST00000523430 EAF2Q96CJ1 260 aaPredicted RBP25.49■■□□□ 1.67
SQLE-206ENST00000523430 UBN2Q6ZU65 1347 aa25.48■■□□□ 1.67
SQLE-206ENST00000523430 ONECUT3O60422 494 aaPredicted RBP25.48■■□□□ 1.67
SQLE-206ENST00000523430 IFIT2P09913 472 aaKnown RBP25.48■■□□□ 1.67
SQLE-206ENST00000523430 RBM25P49756 843 aaKnown RBP25.48■■□□□ 1.67
SQLE-206ENST00000523430 SEPT12Q8IYM1 358 aa25.48■■□□□ 1.67
SQLE-206ENST00000523430 TTC41PQ6P2S7 1318 aa25.47■■□□□ 1.67
SQLE-206ENST00000523430 SBF2Q86WG5 1849 aa25.47■■□□□ 1.67
SQLE-206ENST00000523430 TLR7Q9NYK1 1049 aaKnown RBP25.47■■□□□ 1.67
SQLE-206ENST00000523430 MAP4K4O95819 1239 aaPredicted RBP25.47■■□□□ 1.67
SQLE-206ENST00000523430 SYNE4Q8N205 404 aa25.47■■□□□ 1.67
SQLE-206ENST00000523430 BCORQ6W2J9 1755 aa25.46■■□□□ 1.67
SQLE-206ENST00000523430 CCDC8Q9H0W5 538 aaPredicted RBP25.45■■□□□ 1.67
SQLE-206ENST00000523430 ECHDC1Q9NTX5 307 aa25.45■■□□□ 1.67
SQLE-206ENST00000523430 CAMTA2O94983 1202 aa25.45■■□□□ 1.66
SQLE-206ENST00000523430 TFCP2Q12800 502 aa25.45■■□□□ 1.66
SQLE-206ENST00000523430 QTRT2Q9H974 415 aaKnown RBP25.45■■□□□ 1.66
SQLE-206ENST00000523430 AK9Q5TCS8 1911 aa25.44■■□□□ 1.66
SQLE-206ENST00000523430 CDHR2Q9BYE9 1310 aa25.44■■□□□ 1.66
SQLE-206ENST00000523430 ZNF34Q8IZ26 560 aa25.44■■□□□ 1.66
SQLE-206ENST00000523430 PLA2G12BQ9BX93 195 aa25.44■■□□□ 1.66
SQLE-206ENST00000523430 GPATCH3Q96I76 525 aa25.43■■□□□ 1.66
SQLE-206ENST00000523430 GLRX3O76003 335 aaKnown RBP25.43■■□□□ 1.66
SQLE-206ENST00000523430 ZNF594Q96JF6 807 aaPredicted RBP25.43■■□□□ 1.66
SQLE-206ENST00000523430 LY75O60449 1722 aa25.42■■□□□ 1.66
SQLE-206ENST00000523430 CCDC85AQ96PX6 553 aaPredicted RBP25.42■■□□□ 1.66
SQLE-206ENST00000523430 ERC2O15083 957 aa25.41■■□□□ 1.66
SQLE-206ENST00000523430 CHMLP26374 656 aa25.41■■□□□ 1.66
SQLE-206ENST00000523430 ATG9AQ7Z3C6 839 aa25.41■■□□□ 1.66
SQLE-206ENST00000523430 TRMT112Q9UI30 125 aaKnown RBP25.41■■□□□ 1.66
SQLE-206ENST00000523430 CNTNAP4Q9C0A0 1308 aa25.41■■□□□ 1.66
SQLE-206ENST00000523430 TNNI3KQ59H18 835 aa25.4■■□□□ 1.66
SQLE-206ENST00000523430 DAXXQ9UER7 740 aaPredicted RBP25.4■■□□□ 1.66
SQLE-206ENST00000523430 FPGT-TNNI3KV9GXZ4 949 aa25.4■■□□□ 1.66
SQLE-206ENST00000523430 EIF5BO60841 1220 aaKnown RBP25.4■■□□□ 1.66
SQLE-206ENST00000523430 SCN7AQ01118 1682 aa25.39■■□□□ 1.66
SQLE-206ENST00000523430 CNTROBQ8N137 903 aa25.39■■□□□ 1.66
SQLE-206ENST00000523430 KIF2CQ99661 725 aa25.39■■□□□ 1.66
SQLE-206ENST00000523430 ESYT1Q9BSJ8 1104 aa25.39■■□□□ 1.66
SQLE-206ENST00000523430 CSF1RP07333 972 aa25.38■■□□□ 1.65
SQLE-206ENST00000523430 LRRC24Q50LG9 513 aa25.38■■□□□ 1.65
SQLE-206ENST00000523430 DBNLQ9UJU6 430 aaKnown RBP25.38■■□□□ 1.65
SQLE-206ENST00000523430 MYH3P11055 1940 aa25.38■■□□□ 1.65
SQLE-206ENST00000523430 BRWD3Q6RI45 1802 aa25.38■■□□□ 1.65
SQLE-206ENST00000523430 IRS4O14654 1257 aaPredicted RBP25.38■■□□□ 1.65
SQLE-206ENST00000523430 CCDC57Q2TAC2 916 aa25.38■■□□□ 1.65
SQLE-206ENST00000523430 USP26Q9BXU7 913 aa25.38■■□□□ 1.65
SQLE-206ENST00000523430 EYA2O00167 538 aa25.37■■□□□ 1.65
SQLE-206ENST00000523430 CTSWP56202 376 aa25.37■■□□□ 1.65
SQLE-206ENST00000523430 SUSD4Q5VX71 490 aa25.37■■□□□ 1.65
SQLE-206ENST00000523430 CCNL1Q9UK58 526 aaPredicted RBP25.37■■□□□ 1.65
SQLE-206ENST00000523430 REC8O95072 547 aa25.36■■□□□ 1.65
SQLE-206ENST00000523430 BECN1Q14457 450 aa25.36■■□□□ 1.65
SQLE-206ENST00000523430 SMIM5Q71RC9 77 aa25.36■■□□□ 1.65
SQLE-206ENST00000523430 TBC1D2Q9BYX2 928 aa25.36■■□□□ 1.65
SQLE-206ENST00000523430 PUS3Q9BZE2 481 aaKnown RBP25.36■■□□□ 1.65
SQLE-206ENST00000523430 TAF1LQ8IZX4 1826 aa25.36■■□□□ 1.65
SQLE-206ENST00000523430 IL15P40933 162 aaPredicted RBP25.36■■□□□ 1.65
SQLE-206ENST00000523430 IL25Q9H293 177 aa25.36■■□□□ 1.65
SQLE-206ENST00000523430 ZNF609O15014 1411 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms