RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 VEGFBP49765 207 aa8.8□□□□□ -1
CSMD1-211ENST00000523062 KRT28Q7Z3Y7 464 aa8.8□□□□□ -1
CSMD1-211ENST00000523062 KCTD17Q8N5Z5 321 aa8.8□□□□□ -1
CSMD1-211ENST00000523062 RDH13Q8NBN7 331 aa8.8□□□□□ -1
CSMD1-211ENST00000523062 GAS2L2Q8NHY3 880 aa8.8□□□□□ -1
CSMD1-211ENST00000523062 IP6K1Q92551 441 aa8.8□□□□□ -1
CSMD1-211ENST00000523062 STRCQ7RTU9 1775 aa8.8□□□□□ -1
CSMD1-211ENST00000523062 LTN1O94822 1766 aa8.79□□□□□ -1
CSMD1-211ENST00000523062 ZNF853P0CG23 659 aa8.79□□□□□ -1
CSMD1-211ENST00000523062 GCGRP47871 477 aa8.79□□□□□ -1
CSMD1-211ENST00000523062 XPCQ01831 940 aaPredicted RBP8.79□□□□□ -1
CSMD1-211ENST00000523062 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
CSMD1-211ENST00000523062 FRAT1Q92837 279 aaPredicted RBP8.79□□□□□ -1
CSMD1-211ENST00000523062 THUMPD2Q9BTF0 503 aaKnown RBP8.79□□□□□ -1
CSMD1-211ENST00000523062 SMC4Q9NTJ3 1288 aa8.79□□□□□ -1
CSMD1-211ENST00000523062 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.79□□□□□ -1
CSMD1-211ENST00000523062 DLG5Q8TDM6 1919 aa8.79□□□□□ -1
CSMD1-211ENST00000523062 NPHP3Q7Z494 1330 aa8.79□□□□□ -1
CSMD1-211ENST00000523062 KIF16BQ96L93 1317 aa8.79□□□□□ -1
CSMD1-211ENST00000523062 ALS2Q96Q42 1657 aa8.78□□□□□ -1
CSMD1-211ENST00000523062 MMP16P51512 607 aa8.78□□□□□ -1
CSMD1-211ENST00000523062 AAMPQ13685 434 aa8.78□□□□□ -1
CSMD1-211ENST00000523062 ALDH1L2Q3SY69 923 aa8.78□□□□□ -1
CSMD1-211ENST00000523062 RC3H1Q5TC82 1133 aaKnown RBP8.78□□□□□ -1
CSMD1-211ENST00000523062 ZKSCAN2Q63HK3 967 aa8.78□□□□□ -1
CSMD1-211ENST00000523062 CFAP44Q96MT7 982 aa8.78□□□□□ -1
CSMD1-211ENST00000523062 BCL2L13Q9BXK5 485 aa8.78□□□□□ -1
CSMD1-211ENST00000523062 LAS1LQ9Y4W2 734 aaKnown RBP8.78□□□□□ -1
CSMD1-211ENST00000523062 HTATSF1O43719 755 aaKnown RBP8.77□□□□□ -1.01
CSMD1-211ENST00000523062 GCP02774 474 aa8.77□□□□□ -1.01
CSMD1-211ENST00000523062 SSH1Q8WYL5 1049 aa8.77□□□□□ -1.01
CSMD1-211ENST00000523062 MBIPQ9NS73 344 aa8.77□□□□□ -1.01
CSMD1-211ENST00000523062 TNS3Q68CZ2 1445 aa8.77□□□□□ -1.01
CSMD1-211ENST00000523062 XIRP1Q702N8 1843 aaKnown RBP8.76□□□□□ -1.01
CSMD1-211ENST00000523062 FAM83GA6ND36 823 aa8.76□□□□□ -1.01
CSMD1-211ENST00000523062 DDX11L8A8MPP1 907 aa8.76□□□□□ -1.01
CSMD1-211ENST00000523062 IPO8O15397 1037 aaKnown RBP8.76□□□□□ -1.01
CSMD1-211ENST00000523062 HAP1P54257 671 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-211ENST00000523062 BRPF1P55201 1214 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-211ENST00000523062 WNT7BP56706 349 aa8.76□□□□□ -1.01
CSMD1-211ENST00000523062 MTHFSDQ2M296 383 aaKnown RBP8.76□□□□□ -1.01
CSMD1-211ENST00000523062 CENPQQ7L2Z9 268 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-211ENST00000523062 ARHGEF25Q86VW2 580 aa8.76□□□□□ -1.01
CSMD1-211ENST00000523062 PANK1Q8TE04 598 aa8.76□□□□□ -1.01
CSMD1-211ENST00000523062 RTF1Q92541 710 aaKnown RBP8.76□□□□□ -1.01
CSMD1-211ENST00000523062 LTV1Q96GA3 475 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-211ENST00000523062 CRB1P82279 1406 aa8.76□□□□□ -1.01
CSMD1-211ENST00000523062 MED1Q15648 1581 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-211ENST00000523062 ZNF335Q9H4Z2 1342 aaPredicted RBP8.76□□□□□ -1.01
CSMD1-211ENST00000523062 PXDNQ92626 1479 aa8.76□□□□□ -1.01
CSMD1-211ENST00000523062 ABCC6O95255 1503 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 MAP3K5Q99683 1374 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 NCAPD2Q15021 1401 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 ZBTB7CA1YPR0 619 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 CHL1O00533 1208 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 ALDH1A1P00352 501 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 DCTN1Q14203 1278 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 GRIPAP1Q4V328 841 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 PAXIP1Q6ZW49 1069 aaPredicted RBP8.75□□□□□ -1.01
CSMD1-211ENST00000523062 TRIM46Q7Z4K8 759 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 FTSJ3Q8IY81 847 aaKnown RBP8.75□□□□□ -1.01
CSMD1-211ENST00000523062 DZIP1LQ8IYY4 767 aaKnown RBP8.75□□□□□ -1.01
CSMD1-211ENST00000523062 CLUAP1Q96AJ1 413 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 COG6Q9Y2V7 657 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 LRRC37A3O60309 1634 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 KDM2BQ8NHM5 1336 aa8.75□□□□□ -1.01
CSMD1-211ENST00000523062 KIAA0232Q92628 1395 aa8.74□□□□□ -1.01
CSMD1-211ENST00000523062 CAPN5O15484 640 aaPredicted RBP8.74□□□□□ -1.01
CSMD1-211ENST00000523062 VAMP4O75379 141 aa8.74□□□□□ -1.01
CSMD1-211ENST00000523062 SKOR1P84550 965 aa8.74□□□□□ -1.01
CSMD1-211ENST00000523062 HIC1Q14526 733 aa8.74□□□□□ -1.01
CSMD1-211ENST00000523062 MVPQ14764 893 aaKnown RBP8.74□□□□□ -1.01
CSMD1-211ENST00000523062 TWISTNBQ3B726 338 aaPredicted RBP8.74□□□□□ -1.01
CSMD1-211ENST00000523062 ATF7IPQ6VMQ6 1270 aa8.74□□□□□ -1.01
CSMD1-211ENST00000523062 MCM10Q7L590 875 aa8.74□□□□□ -1.01
CSMD1-211ENST00000523062 TMEM151AQ8N4L1 468 aa8.74□□□□□ -1.01
CSMD1-211ENST00000523062 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
CSMD1-211ENST00000523062 CAMTA1Q9Y6Y1 1673 aa8.74□□□□□ -1.01
CSMD1-211ENST00000523062 GNAT3A8MTJ3 354 aa8.73□□□□□ -1.01
CSMD1-211ENST00000523062 TCERG1O14776 1098 aaKnown RBP8.73□□□□□ -1.01
CSMD1-211ENST00000523062 RLBP1P12271 317 aa8.73□□□□□ -1.01
CSMD1-211ENST00000523062 BMP1P13497 986 aa8.73□□□□□ -1.01
CSMD1-211ENST00000523062 TRIM27P14373 513 aa8.73□□□□□ -1.01
CSMD1-211ENST00000523062 GSK3AP49840 483 aa8.73□□□□□ -1.01
CSMD1-211ENST00000523062 Q3C1V9 767 aa8.73□□□□□ -1.01
CSMD1-211ENST00000523062 BRINP3Q76B58 766 aa8.73□□□□□ -1.01
CSMD1-211ENST00000523062 ANKRD24Q8TF21 1146 aa8.73□□□□□ -1.01
CSMD1-211ENST00000523062 FBXO41Q8TF61 875 aa8.73□□□□□ -1.01
CSMD1-211ENST00000523062 SPATA31A3Q5VYP0 1347 aa8.73□□□□□ -1.01
CSMD1-211ENST00000523062 NBPF6Q5VWK0 638 aa8.72□□□□□ -1.01
CSMD1-211ENST00000523062 USHBP1Q8N6Y0 703 aa8.72□□□□□ -1.01
CSMD1-211ENST00000523062 TSPYL6Q8N831 410 aa8.72□□□□□ -1.01
CSMD1-211ENST00000523062 C8orf58Q8NAV2 365 aa8.72□□□□□ -1.01
CSMD1-211ENST00000523062 ARHGAP45Q92619 1136 aa8.72□□□□□ -1.01
CSMD1-211ENST00000523062 NBPF4Q96M43 638 aa8.72□□□□□ -1.01
CSMD1-211ENST00000523062 BABAM1Q9NWV8 329 aa8.72□□□□□ -1.01
CSMD1-211ENST00000523062 NOB1Q9ULX3 412 aaKnown RBP8.72□□□□□ -1.01
CSMD1-211ENST00000523062 DDX19BQ9UMR2 479 aa8.72□□□□□ -1.01
CSMD1-211ENST00000523062 TNNQ9UQP3 1299 aa8.72□□□□□ -1.01
CSMD1-211ENST00000523062 CPDO75976 1380 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms