RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 NIP7Q9Y221 180 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLK4-210ENST00000522136 ZNF652Q9Y2D9 606 aa16.84■□□□□ 0.29
CLK4-210ENST00000522136 PCDHB15Q9Y5E8 787 aa16.84■□□□□ 0.29
CLK4-210ENST00000522136 FAM177BA6PVY3 158 aa16.84■□□□□ 0.29
CLK4-210ENST00000522136 UBTFL1P0CB47 393 aaPredicted RBP16.84■□□□□ 0.29
CLK4-210ENST00000522136 GNAI3P08754 354 aa16.83■□□□□ 0.28
CLK4-210ENST00000522136 GYS1P13807 737 aa16.83■□□□□ 0.28
CLK4-210ENST00000522136 UBE3BQ7Z3V4 1068 aa16.83■□□□□ 0.28
CLK4-210ENST00000522136 PPP4R2Q9NY27 417 aa16.83■□□□□ 0.28
CLK4-210ENST00000522136 SUSD4Q5VX71 490 aa16.82■□□□□ 0.28
CLK4-210ENST00000522136 SYNE4Q8N205 404 aa16.82■□□□□ 0.28
CLK4-210ENST00000522136 CHMP4BQ9H444 224 aaKnown RBP16.82■□□□□ 0.28
CLK4-210ENST00000522136 B4GALNT3Q6L9W6 998 aa16.82■□□□□ 0.28
CLK4-210ENST00000522136 FLAD1Q8NFF5 587 aa16.82■□□□□ 0.28
CLK4-210ENST00000522136 LRRFIP2Q9Y608 721 aaKnown RBP16.82■□□□□ 0.28
CLK4-210ENST00000522136 UTYO14607 1347 aa16.82■□□□□ 0.28
CLK4-210ENST00000522136 H7C1W4 665 aa16.81■□□□□ 0.28
CLK4-210ENST00000522136 FAM89AQ96GI7 184 aa16.81■□□□□ 0.28
CLK4-210ENST00000522136 SUCLG2Q96I99 432 aa16.81■□□□□ 0.28
CLK4-210ENST00000522136 GNAI2P04899 355 aa16.8■□□□□ 0.28
CLK4-210ENST00000522136 CASP7P55210 303 aa16.8■□□□□ 0.28
CLK4-210ENST00000522136 PDGFDQ9GZP0 370 aaPredicted RBP16.8■□□□□ 0.28
CLK4-210ENST00000522136 RGL2O15211 777 aa16.8■□□□□ 0.28
CLK4-210ENST00000522136 AAMPQ13685 434 aa16.8■□□□□ 0.28
CLK4-210ENST00000522136 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
CLK4-210ENST00000522136 TRMT112Q9UI30 125 aaKnown RBP16.8■□□□□ 0.28
CLK4-210ENST00000522136 NFIXQ14938 502 aa16.79■□□□□ 0.28
CLK4-210ENST00000522136 PARP10Q53GL7 1025 aa16.79■□□□□ 0.28
CLK4-210ENST00000522136 SETDB2Q96T68 719 aa16.79■□□□□ 0.28
CLK4-210ENST00000522136 IBTKQ9P2D0 1353 aaPredicted RBP16.79■□□□□ 0.28
CLK4-210ENST00000522136 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
CLK4-210ENST00000522136 PCCAP05165 728 aaPredicted RBP16.78■□□□□ 0.28
CLK4-210ENST00000522136 EPHA10Q5JZY3 1008 aa16.78■□□□□ 0.28
CLK4-210ENST00000522136 ZBTB38Q8NAP3 1195 aaPredicted RBP16.78■□□□□ 0.28
CLK4-210ENST00000522136 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
CLK4-210ENST00000522136 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
CLK4-210ENST00000522136 SIRT2Q8IXJ6 389 aa16.78■□□□□ 0.28
CLK4-210ENST00000522136 UTP14AQ9BVJ6 771 aaKnown RBP16.78■□□□□ 0.28
CLK4-210ENST00000522136 NTSR2O95665 410 aa16.77■□□□□ 0.28
CLK4-210ENST00000522136 CEP85Q6P2H3 762 aa16.77■□□□□ 0.28
CLK4-210ENST00000522136 NUTM1Q86Y26 1132 aa16.77■□□□□ 0.28
CLK4-210ENST00000522136 IGHDP01880 384 aa16.77■□□□□ 0.27
CLK4-210ENST00000522136 PPP1R42Q7Z4L9 355 aa16.77■□□□□ 0.27
CLK4-210ENST00000522136 BICC1Q9H694 974 aaKnown RBP16.77■□□□□ 0.27
CLK4-210ENST00000522136 TM4SF1P30408 202 aa16.76■□□□□ 0.27
CLK4-210ENST00000522136 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
CLK4-210ENST00000522136 PNMA6EA0A0J9YXQ4 647 aa16.75■□□□□ 0.27
CLK4-210ENST00000522136 CCDC24Q8N4L8 307 aa16.75■□□□□ 0.27
CLK4-210ENST00000522136 ANKRD44Q8N8A2 993 aa16.75■□□□□ 0.27
CLK4-210ENST00000522136 SH3TC1Q8TE82 1336 aa16.75■□□□□ 0.27
CLK4-210ENST00000522136 HCLS1P14317 486 aaPredicted RBP16.75■□□□□ 0.27
CLK4-210ENST00000522136 FOXO4P98177 505 aa16.75■□□□□ 0.27
CLK4-210ENST00000522136 ERFEQ4G0M1 354 aa16.75■□□□□ 0.27
CLK4-210ENST00000522136 NBPF5PQ86XG9 351 aaPredicted RBP16.75■□□□□ 0.27
CLK4-210ENST00000522136 NLGN1Q8N2Q7 840 aa16.75■□□□□ 0.27
CLK4-210ENST00000522136 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
CLK4-210ENST00000522136 ATP8B2P98198 1209 aa16.74■□□□□ 0.27
CLK4-210ENST00000522136 DDR1Q08345 913 aa16.74■□□□□ 0.27
CLK4-210ENST00000522136 R3HDM1Q15032 1099 aaKnown RBP16.74■□□□□ 0.27
CLK4-210ENST00000522136 HDAC5Q9UQL6 1122 aa16.74■□□□□ 0.27
CLK4-210ENST00000522136 CDHR2Q9BYE9 1310 aa16.74■□□□□ 0.27
CLK4-210ENST00000522136 RPAP2Q8IXW5 612 aaPredicted RBP16.73■□□□□ 0.27
CLK4-210ENST00000522136 CARMIL3Q8ND23 1372 aa16.73■□□□□ 0.27
CLK4-210ENST00000522136 GTF2E1P29083 439 aaPredicted RBP16.73■□□□□ 0.27
CLK4-210ENST00000522136 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
CLK4-210ENST00000522136 SERPINB2P05120 415 aa16.72■□□□□ 0.27
CLK4-210ENST00000522136 LMBR1LQ6UX01 489 aa16.72■□□□□ 0.27
CLK4-210ENST00000522136 TPTE2Q6XPS3 522 aa16.72■□□□□ 0.27
CLK4-210ENST00000522136 DDX60Q8IY21 1712 aaKnown RBP16.72■□□□□ 0.27
CLK4-210ENST00000522136 SRGAP3O43295 1099 aa16.71■□□□□ 0.27
CLK4-210ENST00000522136 MMP10P09238 476 aa16.71■□□□□ 0.27
CLK4-210ENST00000522136 HDAC1Q13547 482 aaPredicted RBP16.71■□□□□ 0.27
CLK4-210ENST00000522136 CCDC85AQ96PX6 553 aaPredicted RBP16.71■□□□□ 0.27
CLK4-210ENST00000522136 PLA2G12BQ9BX93 195 aa16.71■□□□□ 0.27
CLK4-210ENST00000522136 NYXQ9GZU5 481 aa16.71■□□□□ 0.27
CLK4-210ENST00000522136 RWDD1Q9H446 243 aaPredicted RBP16.71■□□□□ 0.27
CLK4-210ENST00000522136 ABCC12Q96J65 1359 aa16.71■□□□□ 0.27
CLK4-210ENST00000522136 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.27
CLK4-210ENST00000522136 NPHP1O15259 732 aa16.71■□□□□ 0.27
CLK4-210ENST00000522136 RABL6Q3YEC7 729 aaPredicted RBP16.71■□□□□ 0.27
CLK4-210ENST00000522136 MYH3P11055 1940 aa16.71■□□□□ 0.26
CLK4-210ENST00000522136 PDE8AO60658 829 aa16.7■□□□□ 0.26
CLK4-210ENST00000522136 MTX1Q13505 466 aa16.7■□□□□ 0.26
CLK4-210ENST00000522136 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
CLK4-210ENST00000522136 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
CLK4-210ENST00000522136 C3orf67Q6ZVT6 689 aa16.69■□□□□ 0.26
CLK4-210ENST00000522136 CNBD1Q8NA66 436 aa16.69■□□□□ 0.26
CLK4-210ENST00000522136 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
CLK4-210ENST00000522136 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
CLK4-210ENST00000522136 CTSWP56202 376 aa16.69■□□□□ 0.26
CLK4-210ENST00000522136 POLA2Q14181 598 aa16.69■□□□□ 0.26
CLK4-210ENST00000522136 ZBTB7AO95365 584 aa16.68■□□□□ 0.26
CLK4-210ENST00000522136 CSF1RP07333 972 aa16.68■□□□□ 0.26
CLK4-210ENST00000522136 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
CLK4-210ENST00000522136 TTLL11Q8NHH1 800 aa16.68■□□□□ 0.26
CLK4-210ENST00000522136 LAMB2P55268 1798 aa16.68■□□□□ 0.26
CLK4-210ENST00000522136 CASZ1Q86V15 1759 aa16.68■□□□□ 0.26
CLK4-210ENST00000522136 HMMRO75330 724 aa16.68■□□□□ 0.26
CLK4-210ENST00000522136 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
CLK4-210ENST00000522136 PA2G4Q9UQ80 394 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms